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Infect Immun, February 1998, p. 432-440, Vol. 66, No. 2
Laboratory of Microbial Structure and
Function, Rocky Mountain Laboratories, National Institute of
Allergy and Infectious Diseases, National Institutes of Health,
Hamilton, Montana1;
Departments of
Microbiology & Molecular Genetics and Medicine, University of
California Irvine College of Medicine, Irvine,
California2; and
Department of
Microbiology, University of Texas Health Science Center, San Antonio,
Texas3
Received 10 June 1997/Returned for modification 19 August
1997/Accepted 17 November 1997
The tick-borne relapsing fever spirochete Borrelia
hermsii evades the mammalian immune system by periodically
switching expression among members of two multigene families that
encode immunogenic, antigenically distinct outer surface proteins. The
type strain, B. hermsii HS1, has at least 40 complete genes
and pseudogenes that participate in this multiphasic
antigenic variation. Originally termed vmp (for variable
major protein) genes, they have been reclassified as vsp
(for variable small protein) and vlp (for variable
large protein) genes, based on size and amino acid sequence similarities. To date, antigenic variation in B. hermsii
has been studied only in the type strain, HS1. Nucleotide sequence
comparisons of 23 B. hermsii HS1 genes revealed five
distinct groups, the vsp gene family and four subfamilies
of vlp genes. We used PCR with family- and
subfamily-specific primers, followed by restriction fragment length polymorphism analysis, to compare the vsp
and vlp repertoires of HS1 and seven other B. hermsii isolates from Washington, Idaho, and California. This
analysis, together with pulsed-field gel electrophoresis genome
profiles, revealed that the eight isolates formed three distinct
groups, which likely represent clonal lineages. Members of the three
groups coexisted in the same geographic area, but they could
also be isolated across large geographical distances. This population
structure may result from immune selection by the host, as
has been proposed for other pathogens with polymorphic antigens.
Relapsing fever is the medical term
for a disease characterized by a cyclic rise and fall in body
temperature caused by arthropod-transmitted spirochetes of the
genus Borrelia. Louse-borne or epidemic relapsing fever is solely a human disease, whereas tick-borne relapsing fever,
with one exception, is a zoonosis that can be transmitted to humans.
Several tick-borne relapsing fever Borrelia species, each
associated with a different tick vector and mammalian hosts, occur
within discrete geographical areas throughout the world (6).
Borrelia hermsii, for example, persists in natural cycles that involve the soft tick Ornithodoros hermsi, chipmunks,
and tree squirrels in high-altitude forests of California, Arizona, Nevada, Colorado, Oregon, Idaho, Washington, and British Columbia.
After injection into a mammal by an infected, feeding tick, B. hermsii multiplies in the blood stream, achieving numbers that can
exceed 10 million per ml of peripheral blood (48, 53). Fever
occurs as these organisms are cleared by an immune response directed
against a prominent lipoprotein that coats the outer surfaces of
spirochetes. Spirochetes virtually disappear from the blood, and the
fever subsides; however, spirochetemia and fever recur 4 to 7 days later. This second population consists of spirochetes that are
coated with a new lipoprotein which is antigenically
different from the one expressed by the original infecting bacteria.
This antigenic variation is multiphasic; relapse and recovery can
repeat for several cycles, and each relapse population of spirochetes
expresses an antigenically distinct surface lipoprotein that is encoded
by a separate gene (4). At least 40 distinct serotypes have
previously been identified in the progeny of a single cell of B. hermsii HS1, and most of the corresponding genes have been cloned
and sequenced (7, 41). These genes were originally named
variable major protein genes (vmp1, vmp2,
vmp3, etc.). A recent comparison of their amino acid
sequences indicated that the vmp genes comprise two distinct
multigene families; therefore, they have been redesignated
vsp and vlp genes (for variable small and
variable large proteins, respectively) (2, 15).
Genes of both families are found in two locations on linear plasmids in
B. hermsii HS1. In one locus, the expression site, a single
vsp or vlp gene is positioned immediately
downstream of a promoter near one end (or telomere) of a 28- to 30-kb
linear plasmid and only that gene is expressed (27). A
second copy of the expressed gene and all other genes of the two gene
families exist in nonexpressed or silent form at nontelomeric locations on the same linear plasmid or on different linear plasmids of about the
same size. Antigenic variation results from inter- or intraplasmid DNA
rearrangements that replace the gene at the telomeric expression site
with a different vsp or vlp gene, augmented in some cases by postswitch mutations of this previously silent gene (5, 27, 36, 40-42). Any silent vsp or
vlp gene can replace any expressed vsp or
vlp gene, although with different probabilities (3, 8,
53).
Our understanding of the genetic mechanisms of antigenic variation of
relapsing fever Borrelia spp. in the vertebrate host has
emerged from studies of a single isolate of B. hermsii, the type strain HS1. Here we begin an analysis at the population level of
the genes involved in B. hermsii antigenic variation. We
compared the vsp and vlp repertoire of the type
strain HS1 to those of seven other isolates of B. hermsii
from different enzootic foci in the western United States. Parasite
genes that encode surface antigens often seem to be subject to a faster
molecular evolutionary clock than do genes for nonimmunogenic proteins,
probably because allelic (genetic) polymorphism arises through immune
selection of escape variants in previously exposed hosts (12,
57). We reasoned, therefore, that comparisons of the
vsp and vlp genes would reveal finer phylogenetic
differences than would comparisons of conserved, presumably less
variable markers, such as 16S DNA coding for rRNA or flagellin genes.
The results showed extensive variation in the vsp and
vlp genes of different isolates. The variation was not
continuous, however. The eight isolates examined exhibited one of three
basic vsp and vlp profiles, suggesting a
population composed of clones or families of closely related clones.
A second motive for this study arose from our interest in the
interaction of B. hermsii with its tick vector. Originally
isolated in 1968 (56), present stocks of the type strain HS1
have decreased infectivity for ticks, probably as a result of
laboratory passage in vitro and in mice (6). To investigate
the role of variable surface lipoproteins in the invertebrate host, the
tick O. hermsi, we utilized specific Vsp and Vlp antibodies
and gene sequences derived from analysis of the HS1 strain. The present
study identified a new isolate, B. hermsii DAH, that appears
to be identical to B. hermsii HS1 in its vsp and
vlp repertoire and that is infectious for both invertebrate
and vertebrate hosts.
Borrelia strains.
All Borrelia
strains were from the culture collection of the Rocky Mountain
Laboratories. The eight isolates of B. hermsii used in this
study, their geographic origins, and dates of isolation are shown in
Fig. 1 and Table
1. The histories, identifications, and
characterizations of some of these isolates have been described previously (47). A clone of B. hermsii HAN was
obtained by limiting dilution in BSK medium; B. hermsii HS1
has also been previously cloned (53). Other tick-borne
relapsing fever species used were B. turicatae and B. parkeri, (from western North America), B. crocidurae
(from Africa and the Middle East), and B. anserina, the
agent of avian borreliosis (found worldwide). B. coriaceae is the putative cause of tick-borne epizootic bovine abortion (29), and B. burgdorferi B31 is the type strain
of the Lyme disease agent (13).
0019-9567/98/$04.00+0
Copyright © 1998, American Society for Microbiology. All rights reserved.
Population Structure of the Relapsing Fever
Spirochete Borrelia hermsii as Indicated by Polymorphism of
Two Multigene Families That Encode Immunogenic Outer Surface
Lipoproteins
and
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ABSTRACT
Top
Abstract
Introduction
Materials & Methods
Results
Discussion
References
![]()
INTRODUCTION
Top
Abstract
Introduction
Materials & Methods
Results
Discussion
References
![]()
MATERIALS AND METHODS
Top
Abstract
Introduction
Materials & Methods
Results
Discussion
References

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FIG. 1.
Map of western United States showing the geographic
origins of the eight B. hermsii isolates used in this study.
A Roman numeral subscript indicates the group to which an isolate
belongs, based on the similarity of the vsp and
vlp gene repertoire. C, CON; D, DAH; F, FRO; H, HS1; HN,
HAN; M, MAN; R, REN; Y, YOR.
TABLE 1.
B. hermsii isolates used in this study
B. hermsii HS1 vsp and vlp gene sequence comparisons. The nucleotide sequences of 23 vsp and vlp genes previously cloned from B. hermsii HS1 (7, 14, 41, 43) were compared by using the multiple-sequence analysis programs PILEUP and PRETTY of UNIX (version 7; Genetics Computer Group, Inc., Madison, Wis.). The individual genes and their GenBank/EMBL accession numbers are as follows: vsp1, L33870; vsp2, L33897; vsp3, L04789; vsp6, L33898; vsp8, L33899; vsp11, L33900; vsp13, L33901; vsp22, L33902; vsp24, L04786; vlp4, U51926; vlp5, U52035; vlp7, X53926; vlp9, U52036; vlp10, U52037; vlp12, U52038; vlp14, U52148; vlp15, U52039; vlp17, L04788; vlp18, U52149; vlp19, U52040; vlp21, M57256; vlp23, U52041; and vlp25, L04787.
PCR analysis of the vsp and vlp genes. Genomic DNA was isolated by a standard method from Borrelia cultures in BSK II medium (36). PCR (30 cycles) was performed with 50 ng of Borrelia DNA by using a thermal cycler (Perkin-Elmer, Foster City, Calif.) and vsp family- and vlp subfamily-specific primer sets designed from B. hermsii HS1 sequences (Table 2). A 659-bp fragment of the flagellin gene was also amplified from Borrelia species with a generic primer set homologous to conserved regions of the gene (39). A portion of each PCR was electrophoresed on 4% polyacrylamide gels in TBE buffer (90 mM Tris [pH 8.0], 90 mM borate, 2 mM EDTA).
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RFLP analysis of the vsp and vlp
genes.
PCR-amplified DNA fragments were ethanol precipitated,
washed with 70% ethanol, and resuspended in TE (10 mM Tris [pH 8], 1 mM EDTA). DNAs from vsp family- and vlp
subfamily-specific PCRs were digested in separate reactions with the
following restriction endonucleases: DdeI and
RsaI (vsp family); HindIII and
PstI (vlp
); Sau3AI,
ScaI, and SspI (vlp
);
BglII, DdeI, and a
PvuII-HaeIII double digest (vlp
);
and Sau3AI and SspI (vlp
). DNAs
from flagellin gene PCRs were digested with AluI,
PvuII, RsaI, and Sau3AI. Digests were
electrophoresed on 3% SeaPlaque GTG agarose (FMC BioProducts, Rockland, Maine) or 12% polyacrylamide gels with TBE buffer.
Restriction fragment length polymorphism (RFLP) patterns of DNA
amplified from each B. hermsii isolate were individually
compared with that of the HS1 strain to determine a similarity
coefficient (S), the proportion of shared restriction
fragments, as a measure of genetic distance. Each DNA band was treated
as a separate character, and bands of the same electrophoretic mobility
were considered to be shared, regardless of differences in staining
intensity. We used the formula of Nei and Li (37),
S(x,y) = 2nxy/(nx + ny), in which nxy is the
number of fragments shared by the two isolates and
nx and ny are the total
numbers of fragments produced from isolates x and y, respectively.
Pulsed-field gel electrophoresis (PFGE) and Southern blotting. Borrelia cells from BSK II cultures were centrifuged, washed twice with TN (50 mM Tris [pH 8], 150 mM NaCl), and resuspended in TN to a concentration of approximately 109 per ml. An equal volume of molten (37°C) 1% InCert low-melting-temperature agarose (FMC) was mixed with the cell suspension, which was aliquoted to a mold and allowed to gel in the form of agarose blocks. Cells were lysed in situ by incubating agarose blocks for 16 h at 45°C in 50 mM Tris (pH 8)-50 mM EDTA-1% sodium dodecyl sulfate (SDS) containing 1 mg of proteinase K per ml (19). Blocks were washed four times, 1 h each, with TE. Intact genomic DNA from blocks was separated on a 1% agarose gel by transverse alternating field electrophoresis by using the Geneline II system (Beckman Instruments, Palo Alto, Calif.) and a previously described protocol (33). After transverse alternating field electrophoresis, the DNA on the gel was stained with ethidium bromide, photographed, and then transferred from the gel to a Hybond-N membrane (Amersham, Arlington Heights, Ill.) by vacuum blotting (VacuGene; Pharmacia Biotech, Piscataway, N.J.).
For use as probes on Southern blots, vsp and vlp-specific PCRs were diluted 1:1,000 and reamplified. Reamplified DNA fragments were purified by using Sephacryl S-400 microspin columns (Pharmacia) and labelled with [
-32P]dATP by means of a random primer labelling kit
(Boeringher Mannheim, Indianapolis, Ind.). Southern hybridization was
performed at 37°C for 16 h in 50% formamide-6× SSC (1× SSC
is 0.15 M NaCl plus 0.015 M sodium citrate)-5× Denhardt's
solution-0.5% SDS-0.1 mg of denatured salmon sperm DNA per ml. Final
washes were done with 0.1× SSC-0.1% SDS-0.1 mM EDTA at 63°C.
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RESULTS |
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Four subfamilies of the vlp gene family of B. hermsii HS1.
The nucleotide sequences of 9 vsp
genes (vsp1, -2, -3, -6,
-8, -11, -13, -22, and
-24) and 14 vlp genes (vlp4,
-5, -7, -9, -10,
-12, -14, -15, -17,
-18, -19, -21, -23, and
-25) of B. hermsii HS1 (2, 7, 43) were
compared by using multiple-sequence analysis programs of the Genetics
Computer Group. As previously described (43), the nine
vsp genes comprised one family of genes that ranged from 632 to 654 bp, with 68 to 85% nucleotide sequence similarity. The 14 vlp genes examined ranged from 1,023 to 1,110 bp and formed
four distinct groups, labelled subfamilies
to
(Fig.
2). The branchpoints that separate the
four vlp subfamilies occur much deeper in the dendrogram
than do the branchpoints that separate individual gene sequences within
each subfamily. This is a reflection of the 70 to 87% similarity
between members of each particular vlp subfamily, compared
to the 39 to 51% nucleotide sequence similarities of vlp
genes from different subfamilies.
|
Polymorphism of vsp and vlp genes among
B. hermsii isolates.
A schematic comparison of
vsp and vlp genes is shown in Fig.
3. Probably because of common transport,
lipidation, and membrane-anchoring mechanisms of these surface
lipoproteins (14), the 5' ends of all of the vsp
and vlp genes examined are conserved. All 23 genes are
identical for the first 26 bp, and all, except for vlp
subfamily
genes, are identical for the first 77 bp. Downstream from
this constant leader sequence, the 5' and 3' portions of the genes of
the vsp family or a particular vlp subfamily are
additionally conserved (7, 43). Nucleotide sequence
alignments confirmed that most of the variation between individual
vsp family and vlp subfamily members occurs in a
central region of the genes. From the conserved 5' and 3' regions,
sequences were identified for use as vsp family- and
vlp subfamily-specific PCR primers. Each of the five primer
sets was predicted to amplify the central variable segment of every
member of the vsp family or a particular vlp subfamily of the HS1 strain (except for vsp family primers,
which amplify all vsp genes except for vsp11) but
not those of genes outside of the subfamily. Because the primer
sequences occurred within genes, both silent and expressed forms were
amplified.
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subfamily primers, and B. turicatae yielded a product only with the vlp
subfamily primers. B. crocidurae, a relapsing fever agent
from the Mediterranean region, and B. coriaceae, the
putative agent of epizootic bovine abortion isolated from California,
generated products from both the vlp
and
vlp
subfamily primer sets. B. burgdorferi, the
agent of Lyme borreliosis, and B. anserina, the agent of
avian borreliosis, were negative for all five PCRs.
The PCR analysis discussed above utilized conserved 5' and 3' sequences
to amplify the central variable regions of all the vsp and
vlp genes. Many of the individual products were predicted to
be nearly the same size and not resolvable, even by polyacrylamide gel
electrophoresis. Thus, the observed number of PCR fragments generated
from the HS1 strain (Fig. 4) was less than the number of known genes
(Fig. 2). To further compare the vsp and vlp
repertoires of isolates, portions of the PCRs of Fig. 4 were digested
with restriction endonucleases prior to gel electrophoresis. Because the most variable regions of these genes were amplified, we expected this subsequent RFLP analysis to increase observable differences among
isolates. Restriction enzymes with known sites in HS1 sequences were
chosen. The RFLP profiles for the vsp family are shown in Fig. 5; the results for the
vlp subfamilies are not shown. The RFLP patterns generated
from the type strain HS1 included all of the fragments predicted from
the known sequences of the 23 genes analyzed and a few fragments
presumably derived from other vsp and vlp genes.
The RFLP patterns of the seven previously uncharacterized B. hermsii isolates were compared to that of HS1 by calculating an
estimate of genetic distance, S, the proportion of
restriction fragments shared by the pair of isolates (37).
S values range from 1.0 (complete identity) to 0 (total
dissimilarity). For comparison, RFLP analysis was also conducted with a
659-bp fragment amplified from the flagellin gene of each of the eight
B. hermsii isolates. RFLP analyses of two separate sets of
PCRs were identical.
|
. Genetic variability among vsp and
vlp genes appeared to be much greater than that among the
flagellin genes of the eight isolates. B. hermsii HS1, DAH,
FRO, MAN and CON were identical in their flagellin RFLP profiles for
all four restriction enzymes used. B. hermsii HAN, YOR, and REN were identical and differed from the others by a single
RsaI site. The nucleotide sequence of a 220-bp portion of
the flagellin gene of B. hermsii YOR has previously been
determined; it differs from the HS1 flagellin gene sequence at five
nucleotide positions (2.3% base substitution) (39).
|
Linear plasmid location of the vsp and vlp gene families. Silent and expressed vsp and vlp genes of B. hermsii HS1 have previously been mapped to linear plasmids (27, 40). To see whether this is true for the other isolates, PFGE was performed with genomic DNA from each of the eight isolates, followed by Southern hybridization with HS1 vsp and vlp gene probes. The ethidium bromide-stained gel showed that the linear chromosome and linear plasmid profiles of the eight isolates correlated with the classification described above for the vsp and vlp gene family repertoire. Isolates HS1, DAH, FRO, MAN and CON formed one group, YOR and REN formed a second group, and the unique HAN isolate formed a third group (Fig. 6A). Among the HS1 group, the largest linear plasmid (180 to 200 kb) of the CON isolate was noticeably smaller than those of the other four isolates. Strain HS1 had a linear plasmid of about 40 kb that was not present in the others (Fig. 6). This difference, however, was due to a size increase of the HS1 expression plasmid from 30 to 40 kb, which occurred during in vitro passage, probably as a result of intragenic plasmid recombination (2).
|
(Fig. 2B), mapped to at least two linear
plasmids. A composite in which the hybridization probe was a mixture of the products of all five vsp and vlp PCRs from
HS1 is shown in Fig. 6B. The hybridization patterns and linear-plasmid
profiles are consistent with and thus reinforce the grouping of
isolates based on vsp and vlp polymorphisms.
Individual vlp subfamily probes (but not the vsp
family probe) also hybridized weakly to the chromosomes of the five
related strains or to a DNA species that comigrated with the chromosome
on PFGE gels. Whether this was due to the occurrence of
vlp-related sequences on the chromosome or minor amplification of an unrelated chromosomal segment during PCR generation of the probes is not known.
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DISCUSSION |
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The antigenic variation of B. hermsii, revealed by many
years of studying the type strain HS1, is due to frequent gene
conversions in which an expressed gene at a recombinogenic telomeric
expression locus is replaced by a different, previously silent gene
(27, 40). The 23 vsp and vlp genes of
B. hermsii HS1 that we compared compose five distinct
groups, based on nucleotide sequence similarity (Fig. 2). In an earlier
study, the order of vsp and vlp genes expressed
during relapsing fever did not follow a preordained program nor was it
completely random (3, 8, 53). The three most common
first-relapse serotypes, however, resulted from switches to
vlp7 (
subfamily), vsp2, or vlp17
(
subfamily). Since Vsp proteins or Vlp proteins of the same
subfamily can share epitopes (9), switching to an
antigenically unrelated gene of another family or subfamily may be
important in prolonging infection.
All previous work with the vsp and vlp genes of B. hermsii has been done with HS1, the type strain. This study is the first investigation at the population level of these two B. hermsii gene families that underlie the outer surface protein antigenic variation which occurs during relapsing fever. Allelic polymorphism of immunogenic outer surface protein genes at the population level has previously been observed in viruses (1, 44, 45), protozoa (16), and bacteria (12), including the circular plasmid-borne gene encoding outer surface lipoprotein OspC of the Lyme disease spirochete B. burgdorferi. Like the Vsp and Vlp lipoproteins of B. hermsii, OspC appears to be the predominant outer surface lipoprotein during initial infection of a mammal (20, 38, 49), and different isolates of B. burgdorferi exhibit extensive allelic polymorphism of this gene (24, 31, 52, 54, 55, 58). To extend the comparison further, ospC of B. burgdorferi has previously been shown to be similar in sequence to vsp33 of B. hermsii HS1 (17, 34).
We compared the vsp and vlp repertoires of seven isolates of B. hermsii from California, Idaho, and Washington (47) to that of the HS1 type strain, originally isolated in 1968 near Spokane, Wash. (56) (Fig. 1). This comparison revealed another type of genetic variation of vsp and vlp genes, polymorphism at the population level. The polymorphism was not continuous but discrete; the eight isolates appeared to represent three groups. The HS1-related group contained DAH, FRO, MAN, CON, and the type strain. These five had not only 77% or greater RFLP similarities in vsp and vlp profiles but also identical flagellin gene RFLP profiles (Fig. 5; Table 3) and similar genome profiles, with vsp and vlp genes located on linear plasmids of similar sizes (Fig. 6). Of these five isolates, B. hermsii DAH was identical to HS1 in its vsp and vlp profile. For unknown reasons which do not involve apparent changes in vsp or vlp gene repertoire, laboratory passage of B. hermsii HS1 (as well as Lyme disease Borrelia spp.) can result in loss of infectivity for mammals and serial passage in the vertebrate host can result in loss of infectivity for ticks (6, 46). Thus, low-passage, fully infectious B. hermsii DAH should be useful in studying relapsing fever pathogenesis and transmission, because the vsp- and vlp-specific antisera and sequence data accrued from many years of work with the type strain can potentially be utilized. The type strain-related group also included B. hermsii FRO, which was 96% identical to HS1 in its vsp and vlp profile, and the MAN and CON isolates, which were 83 and 77% identical to HS1, respectively. A second group was composed of B. hermsii YOR and REN. These two isolates had identical vsp and vlp profiles, which were only 53% similar to the HS1 profile, and identical genome profiles. The third group was represented by a single isolate, B. hermsii HAN, which had a vsp and vlp profile that was only 54% similar to that of HS1 and had a unique genome profile.
There are interesting parallels between the antigenic variation of this spirochete at the clonal level and that at the population level. A single B. hermsii cell contains distinct groups of outer surface antigen genes (Fig. 2), and the total population appears to be made up of distinct groups of isolates with different allelic repertoires of these genes. Just as the ability of a single spirochete to switch expression among antigenically distinct vsp and vlp genes allows escape from an individual host's immune response, allelic polymorphism or genetic variability of vsp and vlp genes within the total spirochete population may help to evade herd immunity (21, 22). This may be particularly important for a parasite, such as B. hermsii, that is transmitted within discrete enzootic foci by a nest-dwelling tick.
A population composed of independent strains with nonoverlapping repertoires of polymorphic antigenic determinants is characteristic of several pathogens. African trypanosomes, which exhibit multiphasic antigenic variation of variable surface glycoproteins (Vsg proteins) during infection in a manner strikingly similar to that of B. hermsii (11, 27), provide one example. Populations of Trypanosoma species are made up of different serodemes, or strains with distinct repertoires of vsg alleles (35), which are analogous to the three groups of B. hermsii delineated in this study. A stable collection of strains with allelic differences in immunogenic surface antigen genes also typifies populations of Plasmodium falciparum (variable antigen types) and the bacterium Neisseria meningitidis (polymorphic epitopes of the outer membrane protein PorA) (21). Immune selection by the host has previously been proposed as the driving force that organizes a parasite population into independently transmitted strains that do not share alleles. According to this model, exposure to one strain leads to complete or partial cross-protection against all members of the same strain but the host remains susceptible to other strains circulating in the herd (21). A second model is suggested by the fact that the three species of North American relapsing fever borreliae have complete specificity for three species of Ornithodoros ticks (6). Likewise, the groups of B. hermsii detected here could have resulted from coevolution with distinct, reproductively isolated strains of the O. hermsi vector. Although little is known about the population genetics of O. hermsi, the coexistence of all three B. hermsii groups within the same enzootic focus (Fig. 1) appears to be inconsistent with this hypothesis.
Because the population structure described here has previously been observed for both sexual (frequently recombining) and clonal (rarely recombining) pathogens, the B. hermsii groups we detected cannot be assumed to consist of independent clonal lineages. Nevertheless, our results suggest that B. hermsii, like B. burgdorferi (10, 18, 30), has a clonal population structure. Clonality of bacteria at the population level refers to infrequent genetic exchange and recombination between different cell lines (50, 51). One criterion of a clonal population is linkage disequilibrium, the nonrandom association of genetic markers. Although only eight isolates were examined and their individual vsp and vlp gene sequences were not compared, evidence of linkage disequilibrium was detected. Three B. hermsii groups were apparent by RFLP analysis of the vsp and vlp genes, and this conformed with the classification based on other markers, including RFLP patterns of the flagellin gene, PFGE genome profiles, and hybridization patterns of the two multigene families (Fig. 6). In addition, previous characterizations of plasmid and total protein profiles, Western and Southern blot reactivities, genomic DNA RFLP profiles, and PCRs of vlp7 and vlp21 genes of the eight isolates were consistent with the classification based on vsp and vlp polymorphisms (46, 47). Further evidence for or against linkage disequilibrium and a clonal population structure will come from comparing phylogenetic trees of the vsp and vlp gene sequences with those of other genetic markers, such as 16S DNA coding for rRNA and flagellin genes, as well as from other population genetics analyses, such as multilocus enzyme electrophoresis. A second characteristic of clonal populations is the ability to recover isolates of identical genotypes over large geographic areas and long periods (50). Perhaps most telling are the allopatric northern Californian YOR and Washington state REN isolates, which appeared to be identical in vsp and vlp genes even though they were separated by over 400 miles (Fig. 1). B. hermsii is not spread rapidly by birds or other migratory hosts, suggesting that this dispersal required many years and generations. The apparent genetic identity of the sympatric B. hermsii HS1 and DAH isolates, which were isolated from the Spokane, Wash., area 24 years apart, is also evidence of infrequent gene flow.
Although the eight isolates, except for HS1 and HAN, have not been cloned by limiting dilution, it is unlikely that the vsp and vlp polymorphism seen is due to the isolates being composed of a mixture of clones. Rather, the results indicate that the human blood samples from which the new isolates were cultured contained clonal populations, as evidenced by the identity of independent, geographically and temporally distant isolates. The isolation procedure itself likely entails cloning. Greater than 99% of the population in a spirochetemia express the same lipoprotein gene (41), indicating they are the progeny of a single cell. During isolation, spirochetemic human blood was first used to infect mice and spirochetemic mouse blood was then inoculated into BSK II medium (47). As evidence of this, clones of B. hermsii HAN were identical to the parent isolate in our analyses.
Simple genetic drift might be expected to affect all the vsp
and vlp genes equally, with the consequence that the
estimated genetic distance between isolates would be equivalent for
each multigene family and subfamily. In fact, marked differences were seen. For example, within the HS1-related group, the vsp
genes of the MAN isolate had an S value of 0.96 by RFLP to
the HS1 vsp genes; however, the S value for their
vlp
genes was only 0.57 (Table 3). Conversely, the
vsp genes of the CON isolate had an S value of
only 0.67 to the HS1 vsp genes, whereas the S
value for their vlp
genes was 0.91. A greater disparity
was evident in the vlp
and vlp
genes of the
group composed of the identical YOR and CON isolates, compared to those
of HS1. Their vlp
genes had an S value of
0.71, but the S value for their vlp
genes was only 0.07. The reason for the apparent inconsistency in genetic relatedness across the vsp family and vlp
subfamilies is unclear at this level of analysis. One possibility is
that genetic exchange can occur between isolates. Evidence for possible
horizontal transfer of plasmid-borne outer surface protein gene
sequences of B. burgdorferi has previously been reported
(18, 25, 31, 32). Alternatively, intra- and interplasmid
recombination events (28, 41, 42) that differentially affect
the multigene families in clones may result in different mutation
rates.
The following relapsing fever Borrelia species contained
sequences that were PCR amplified with the B. hermsii HS1
vlp subfamily-specific primer sets indicated (Fig. 4):
B. turicatae (
subfamily) and B. parkeri (
subfamily), which (like B. hermsii) are from the western
United States; and B. crocidurae (
and
subfamilies), which is from the Mediterranean region. The suspected agent of epizootic bovine abortion in the western United States, B. coriaceae, also yielded a product with the vlp
and
vlp
subfamily PCR primers. In a previous study, HS1
vlp7 and vlp21 gene probes (
subfamily) hybridized weakly to B. turicatae and B. coriaceae DNAs (47). Our results support the conclusion
(47) that B. coriaceae is more closely related to
B. hermsii than is B. anserina, the cause of
avian borreliosis, or B. burgdorferi, neither of which were positive in any of the PCRs. RFLP analysis of the PCR products derived
from the other Borrelia species examined revealed that they
were not highly similar to the analogous B. hermsii products (23).
Finally, an ongoing controversy in molecular evolution is the degree to which genetic variation, such as vsp and vlp polymorphism, is selected, in this case by the host's immune system (positive or Darwinian selection), or results from random fixation via genetic drift (neutral theory of evolution) (26). Evidence has previously been found for positive selection of B. burgdorferi ospC variants (54). An ideal test case of the positive-selection hypothesis may be provided by the vsp and vlp genes, because relapsing fever spirochetes rely on them to thwart the mammalian immune response and thus to prolong infection and increase the likelihood of transmission. Answers to these and other questions raised by this study await nucleotide sequence analysis of these two multigene families in multiple B. hermsii isolates.
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ACKNOWLEDGMENTS |
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Donald Anderson, Sacred Heart Medical Center, Spokane, Wash., provided infected human blood samples from which three of the B. hermsii isolates used in this study were cultured. We are grateful to Robert Karstens for technical assistance; to Robert Belland, Patricia Rosa, and John Swanson for reviewing the manuscript; and to Robert Evans and Gary Hettrick for help with preparing figures.
This work was supported in part by NIH grant AI24424 to A.G.B.
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FOOTNOTES |
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* Corresponding author. Mailing address: Laboratory of Microbial Structure and Function, Rocky Mountain Laboratories, National Institute of Allergy and Infectious Diseases, National Institutes of Health, 903 S. 4th St., Hamilton, MT 59840. Phone: (406) 363-9260. Fax: (406) 363-9204. E-mail: joe_hinnebusch{at}nih.gov.
Present address: Corporación para Investigaciones
Biológicas (CIB), Medellín, Colombia.
Editor: J. G. Cannon
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