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Infection and Immunity, March 1999, p. 1501-1504, Vol. 67, No. 3
0019-9567/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.
Specificity and Function of Immunogenic Peptides
from the 35-Kilodalton Protein of Mycobacterium
leprae
Robert John
Wilkinson,1,2,3
Katalin Andrea
Wilkinson,1
Stipo
Jurcevic,1
Adrian
Hills,1
Sudhir
Sinha,4
Utpal
Sengupta,5
Diana N. J.
Lockwood,6
Kiran
Katoch,5
Daniel
Altman,1 and
Juraj
Ivanyi1,*
MRC Clinical Sciences Center, Imperial
College School of Medicine, Hammersmith Hospital, London W12
0NN,1 Department of Clinical Sciences,
London School of Hygiene and Tropical Medicine, London
W1,6 and Wellcome Center for Clinical
Tropical Medicine, Imperial College School of Medicine, Northwick Park
Hospital, Harrow HA1 3UJ,2 United Kingdom,
and National Institute of Immunology, Aruna Asaf Ali Marg,
New Delhi 110067,3 Division of Membrane
Biology, Central Drug Research Institute, Lucknow
226001,4 and Central Jalma Institute for
Leprosy, Taj Ganj, Agra 282001,5 India
Received 20 October 1998/Returned for modification 8 December
1998/Accepted 21 December 1998
 |
ABSTRACT |
We identified a T-cell determinant of the 35-kDa antigen of
Mycobacterium leprae which is discriminatory against
cross-sensitization by its closely related homologue in
Mycobacterium avium. From synthetic peptides covering the
entire sequence, those with the highest affinity and permissive binding
to purified HLA-DR molecules were evaluated for the stimulation of
proliferation of peripheral blood mononuclear cells (PBMCs) from
leprosy patients and healthy sensitized controls. Responses to the
peptide pair 206-224, differing by four residues between M. leprae and M. avium, involved both species-specific
and cross-reactive T cells. Lymph node cell proliferation in
HLA-DRB1*01 transgenic mice was reciprocally species specific, but only
the response to the M. leprae peptide in the context of DR1
was immunodominant. Of the cytokines in human PBMC cultures, gamma
interferon production was negligible, while interleukin 10 (IL-10)
responses in both patients and controls were more pronounced. IL-10 was
most frequently induced by the shared 241-255 peptide, indicating
that environmental cross-sensitization may skew the response
toward a potentially pathogenic cytokine phenotype.
 |
TEXT |
The study of the epitope specificity
and interlinked function of responding T cells may help to improve the
understanding of immunopathogenesis of nerve and skin lesions and may
advance the search for immunodiagnostic and vaccine subunits.
Considering the many antigens with structural homology among the
pathogenic Mycobacterium leprae, Mycobacterium
tuberculosis, and environmental mycobacteria (2) only a
few have been studied by using synthetic peptides for the stimulation
of cloned T cells (10) or blood lymphocytes (3,
12). Although most M. leprae antigens have close
homologues in the M. tuberculosis complex (20),
the 35-kDa antigen is an exception, with homologues in
Mycobacterium avium only (21, 22). The 35-kDa
antigen of M. leprae, a major membrane protein
(8), has been cloned and sequenced (25). It
contains an M. leprae-specific B-cell epitope of
conformational nature (9), which is the target of serum
antibodies (Ab), elevated in a very high proportion of multibacillary,
but only few tuberculoid (TT/BT), leprosy patients (17, 19).
The purified 35-kDa antigen of M. leprae has previously been
found to be stimulatory for peripheral blood mononuclear cells (PBMCs)
of TT/BT leprosy patients and Mycobacterium bovis
BCG-vaccinated healthy subjects in California (15), and the
purified recombinant protein was stimulatory of both proliferation and
gamma interferon (IFN-
) production in 65% of paucibacillary
patients and 80% of healthy contacts in Nepal (21). These
studies with the whole antigen indicated a strong immunogenicity but
also its lack of M. leprae specificity, attributable to
sensitization by the 88% homologous 35-kDa antigen of M. avium, since the gene encoding the 35-kDa protein is not found in
the M. tuberculosis complex or BCG (21, 25). The purpose of this study was to identify immunogenic peptides and search
for M. leprae-specific epitopes involving the 12% of
residues that differ between M. leprae and M. avium. The mapping of T-cell epitopes is complicated in humans
because of heterozygosity at three HLA class II loci (DR, DQ, and DP).
Predictive motifs are only of partial value, and empirical mapping by
PBMC proliferation is too elaborate for larger proteins. Therefore, for
the analysis of the 35-kDa protein we opted for a strategy in which the
initial screening of peptides was carried out by binding to purified
HLA-DR molecules.
Affinity of peptide binding to purified HLA-DR molecules.
On
the basis of the 35-kDa protein sequence (25), a total of 58 15-mer peptides overlapping by five residues were synthesized and
characterized by previously described methods (23). HLA-DR molecules of 10 different haplotypes were purified (5, 6), and the binding assay was performed with mixtures containing purified HLA-DR protein (0.5 µM), N-terminally biotinylated reference peptide (1.8 µM class II-associated invariant chain peptide [CLIP], 1.6 µM influenza hemagglutinin 307-319, or 1.6 µM HLA-A3 153-168), and competitor peptide (0, 3, 30, or 300 µM) (11). The
50% inhibitory concentrations (IC50) for competitor
peptides were calculated by regression analysis of the measured absorbencies.
Of the 58 synthesized peptides, all but two showed some binding
(IC50, <200 µM) for at least one, but often a number, of
the HLA-DR molecules tested, with large variation in the specificity, binding affinity, and the total number of DR alleles bound (results not
shown). Of these, peptides 176-190, 206-219, 271-285, and 276-290
bound to three or more DR alleles with the highest affinity (Table
1). Peptides differing in four to five
residues between M. leprae and M. avium showed
high-affinity (206-220 and 271-285) or moderate-affinity (141-155
and 266-280) DR binding. The M. leprae sequence of 206-219
differs from that of M. avium by a frameshift due to the
insertion of a tyrosine at position 209 in the M. avium
sequence that comes back into frame at position 219 with an additional
isoleucine. The apparent specificity of 271-285 is compromised by the
N-terminal location of four of the distinct residues. Therefore, the
best combination of high affinity and potential specificity was
predicted to be the 206-219 [FGA(P)(T)QFIT WR(H)GIP(R)LI(
)P]
M. leprae sequence (differences in the M. avium sequence are shown in parentheses).
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TABLE 1.
Proliferative responses of leprosy patient and control
PBMCs to peptides selected on the grounds of a distinct sequence and
pronounced binding to HLA-DR molecules
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|
Peptide-stimulated proliferation of PBMCs from leprosy patients and
controls.
All 55 Indian leprosy patients recruited from the
Central Jalma Institute for Leprosy, Agra, India, and the Army
Hospital, Lucknow, India, had received less than 4 weeks of World
Health Organization multidrug chemotherapy, while healthy controls were recruited from staff working in the same institutes. Leprosy patients without microbiologically active disease were from the Hospital for
Tropical Diseases in London, United Kingdom (UK). Healthy purified
protein derivative-negative (4) and purified protein derivative-positive (18) controls, none of whom had been
exposed to leprosy, were recruited from the tuberculosis contact clinic at Northwick Park Hospital, Harrow, England. The absence of any likely
exposure to leprosy was ascertained by excluding those who had traveled
to any area where leprosy was known to be endemic and by excluding any
in a health service occupation. Proliferation and cytokine assays were
performed as previously described (23). Although peptides
were essentially lipopolysaccharide free, polymyxin B (10 µg/ml) was
added to cultures as an additional precaution. The lymphocyte
stimulation index (SI) was calculated as the average counts per minute
in the presence of antigen/the average counts per minute in the absence
of antigen. A positive response was defined by a lymphocyte SI of >2.
A total of 4 of 105 subjects having values for background counts per
minute of >3 standard deviations from the population mean were
excluded from the analysis.
Fourteen peptides which bound with moderate to high affinities
(IC50, <100 µM or <10 µM, respectively) to one or
more DR molecules were selected for evaluation (Table 1). This part of
the study was performed mainly with TT/BT leprosy patients and controls from areas where leprosy was endemic and where it was not. The most
frequently stimulatory peptides, giving positive responses in at least
30% of tested subjects, were 41-55, 141-155, 206-219, 231-245,
266-280, and 271-285. The high frequency of recognition suggests a
genetically permissive recognition (confirmed by PCR and
sequence-specific primer-based HLA-DRB1* typing of the donors; data not
shown). Response frequencies in patients and controls did not differ
consistently for any of the tested peptides. The trend towards greater
recognition of 276-290 by TT/BT patients was not statistically
significant. However, responses to 41-55 were about three times more
frequent for both patients and controls in London than for those in
India (P < 0.01).
Response to pairs of homologous peptides with either the M. leprae or M. avium sequence.
In view of the
abundant exposure to environmental M. avium in areas where
leprosy is endemic, we investigated if cross-sensitization could be
distinguished with a pair of 19-mer peptides (206-224) (rather than
the original 14-mer, 206-219) containing five residues differing
between M. leprae and M. avium. Proliferation was
tested in PBMC cultures of leprosy patients and controls from India and the UK. In the latter group (excluding any contact with M. leprae infection) all but one subject (a total of five) responded
only to the M. avium peptide (P = 0.019),
thus suggesting a specific recognition of M. avium 206-224.
In contrast, T cells from the UK leprosy patients recognized 206-224
in about equal proportions either alone or in conjunction with M. avium 206-224. These data suggest that T cells can recognize each
of these two peptides specifically, but a contribution from
cross-reactive T cells cannot be excluded. This conclusion is
corroborated by the absence of any response to the M. avium
peptide in all three responders of the Indian lepromatous (LL/BL)
group, hence suggesting the presence of M. leprae
206-224-specific T cells. One problem of interpretation remains the
initial finding of 50% responsiveness of UK controls to peptide
206-219 (Table 1). Although the four N-terminal residues of the
extended 19-mer peptide used in the comparison shown in Table
2 were all conserved between the two
species, the addition of these residues ostensibly improved
specificity. Therefore, detailed analysis of the epitope localization
(i.e., window pepscan, establishment of minimal epitope length, the
role of flanking regions, and characterization of the epitope core) is
required. Based on the lack of response in UK controls who were not
exposed to M. leprae infection we conclude, tentatively,
that peptide 206-224 carries M. leprae specificity.
Analysis of p206-224 specificity in HLA-DRB1*0101 transgenic and
FVB/N (H2-Aq) control mice.
The transgenic mice
express both DRB1*0101 and indigenous H2-Aq but only murine
CD4 (1). Mice were immunized subcutaneously in each hind
footpad with 50 µg of synthetic peptides of either the M. leprae or M. avium sequence or with 25 µg of
recombinant 35-kDa protein (a gift from Warwick Britton, Centenary
Institute, Sydney, Australia) (21) (rpL35) or
phosphate-buffered saline emulsified in a 1:1 (vol/vol) ratio with
incomplete Freund's adjuvant (Difco, Detroit, Mich.). After 8 days,
the draining popliteal lymph node (LN) cells in triplicate cultures of
4 × 105 cells/well were incubated in the presence of
the synthetic peptides (50 µg/ml) or rpL35 (10 µg/ml), and
[3H]thymidine uptake (on day 3 after 6 h) was
determined. Reciprocal priming and in vitro stimulation of LN cells
showed that LN cells from M. leprae 206-224-primed mice
were stimulated by the homologous peptide but not by the M. avium peptide (Fig. 1); this
response was higher in the DR1 transgenic mice than in the control FVB mice. Stimulation with rpL35 was also pronounced in the DR1 transgenic mice but was much weaker in the control mice, thus suggesting the
immunodominance of M. leprae 206-224 in the context of DR1. Moreover, this immunodominant determinant appeared to be M. leprae-specific, since LN cells from M. avium
206-224-primed mice responded only to the homologous peptide and not
the peptide or the whole antigen from M. leprae.

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FIG. 1.
Proliferative responses of LN cells from
HLA-DRB1*01-transgenic mice (black bars) and control FVB mice (white
bars). Mice (two males per group) were primed by footpad inoculation
with 50 µg of peptide 206-224 of M. leprae (Ml) or
M. avium (Ma) or 25 µg of rpL35 (rP) in incomplete
Freund's adjuvant. [3H]thymidine uptake corrected for
phosphate-buffered saline controls of pooled 8-day primed LN cells
incubated in the presence of 50 µg of peptide or protein stimuli per
ml was measured for transgenic and control mice. Anti-HLA-DR monoclonal
Ab inhibited 53.3% of the M. leprae 206-224-specific
response and not the rpL35 stimulation of DR1 transgenic LN cells
(results not shown). *31000, counts per minute.
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|
Interestingly, following priming with rpL35, the LN response to the
M. leprae peptide was demonstrable exclusively in the
DR1
transgenic mice and not in the control FVB mice. Thus, the
response to
M. leprae 206-224 was immunodominant in the context
of DR1
but was cryptic in the control FVB mice. Further evidence
for the role
of DR1 was suggested by the finding of 53.3% specific
inhibition of
the peptide response in the LN cultures which contained
the L243
anti-DR1 monoclonal Ab (results not shown). In contrast,
the LN
proliferation response to rpL35 was pronounced in both
DR1 transgenic
and control mice. The response of DR1 transgenic
cells to rpL35 was not
inhibited by the pan-HLA-DR-specific monoclonal
Ab L243 (ATCC HB-55,
mouse immunoglobulin G2a) at 10 µg/ml, when
compared with the same
concentration of isotype control (murine
anti-mouse I-A
b+k,
ATCC HB-163).
Cytokine production by peptide-stimulated PBMCs.
PBMCs
(107 cells/ml) were cultured in 96F plates (Nunc,
Roskilde, Denmark), and the supernatants were harvested at 48 h for enzyme-linked immunosorbent assay. Median values of nonparametric variables with the range were calculated. In cultures of 22 Indian controls and leprosy patients, concanavalin A (5 µg/ml) stimulated higher IFN-
levels in the healthy controls (415.4 pg/ml; range, 409.1 to 642.9 pg/ml) in UK controls than in either the TT/BT group
(344.9 pg/ml; range, 101.5 to 608.2 pg/ml) or the LL/BL group (281.8 pg/ml; range, 70.9 to 583.5 pg/ml) (P < 0.05 in both cases). Although M. leprae soluble extract, obtained from
R. J. W. Rees, World Health Organization Bank, also
stimulated higher IFN-
levels in TT/BT patients (206.0 pg/ml; range,
33.8 to 415.0 pg/ml) than in healthy controls (48.3 pg/ml; range, 0 to
279.1 pg/ml), this difference was not statistically significant, while LL/BL patients produced, as expected, the lowest levels (9.1 pg/ml; range, 0 to 262.2 pg/ml; P < 0.05, by comparison with
the TT/BT group). Most surprisingly, the IFN-
responses of both
healthy controls and TT/BT patients to the tested peptides were very
low (results not shown). Considering the high sensitivity of the
IFN-
assay (
1 pg/ml), the low background production (median value, 0 pg/ml; the highest value in the range was 11 pg/ml), and the high
values in a previous analysis of tuberculosis patients (24), we are confident that the lack of significant peptide-stimulated IFN-
production was not due to technical reasons. This is in contrast with the corresponding proliferation and IFN-
responses to
the recombinant whole 35-kDa protein in the Nepali study
(21). It seems unlikely that immunogenic peptides per se are
not stimulatory of IFN-
, since at least one peptide (p-624), derived
from the LSR/A15 antigen of M. leprae, was reported to be
stimulatory in Indian leprosy patients and controls (13).
The interleukin 10 (IL-10) assay, which had a sensitivity of 20 pg/ml,
showed considerable individual variation (0 to 1000
pg/ml) in the
absence of antigen. Therefore, it was necessary
to compensate for this
problem by introducing an arbitrary cutoff
point for grading a positive
peptide-stimulated increase. The
results (Table
3) showed that the peptide-induced IL-10
response,
irrespective of peptide specificity, was more than twice as
common
among patients with LL/BL disease (37.1%) than in both TT/BT
(14.6%)
and control (14.7%) groups (
P < 0.01).
Moreover, the results also
suggested a significant role for peptide
specificity, since 241-255
induced IL-10 production more frequently
(43.5%) than peptides
41-55, 141-155, or 206-219 (8.7 to 16.17%)
(
P < 0.01), while 231-245
had an intermediate
capacity.
We interpret the significant production of IL-10 in the absence of
antigen in both TT/BT and LL/BL patients as a sign of macrophage
activation, contributing to T anergy in LL disease (
14,
18).
Interestingly peptide 241-255, identical in sequence in both
M. leprae and
M. avium, stimulated an increase in IL-10
secretion,
especially in LL/BL patients, whereas the
M. leprae-specific 206-219
sequence induced a minimal IL-10
response. Although the protective
effect of BCG against leprosy
(
16) suggests a role for cross-reactive
T cells in
protection, our observation suggests that sensitization
by
M. avium in this instance could lead to a nonprotective response.
Downregulation of the expression of major histocompatibility complex
class II and costimulatory molecules on antigen-presenting cells
by
IL-10 (
4) could also explain the observed low IFN-

response
to peptides. It is of further interest that 241-255 binds
with
the highest affinity to the DR15 allele, which has been associated
with leprosy (
7).
 |
ACKNOWLEDGMENTS |
This work was supported by the European Commission EC STD3 contract
TS3*CT940304 and the Medical Research Council of the UK. R.J.W. is
a Wellcome Trust Fellow in Clinical Tropical Medicine.
We thank Carlos Moreno for designing the peptides; Warwick Britton of
the Centenary Institute in Sydney, Australia, for providing the
recombinant 35-kDa antigen; and Rama Mukherjee and K. K. Sarin, who provided the laboratory facilities at the National Institute for
Immunology in New Delhi. We also thank Belinda McGinty for help in
performing and interpreting the PCR with sequence-specific primers,
Hemlata Devchand and Martin Vordermeier for assistance with the DRB1*01
transgenic mice, Peter Byfield for performing mass spectroscopy on the
peptides, and Mohammed Latif for assistance in recruiting healthy
donors in Harrow, England, who had not been exposed to leprosy. We also
thank W. H. Boom of Case Western Reserve University, Cleveland,
Ohio, for helpful comments on the manuscript.
 |
FOOTNOTES |
*
Corresponding author. Present address: Department of
Oral Medicine & Pathology, Floor 28, Guy's Tower, GKT School of
Medicine & Dentistry, Guy's Hospital, London SE1 9RT, United Kingdom.
Phone: 44 171 955 4256. Fax: 44 171 955 4455. E-mail:
j.ivanyi{at}umds.ac.uk.
Editor:
E. I. Tuomanen
 |
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Infection and Immunity, March 1999, p. 1501-1504, Vol. 67, No. 3
0019-9567/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.
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