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Infection and Immunity, May 2000, p. 2435-2440, Vol. 68, No. 5
Departamento de Microbiología,
Facultad de Biología, Universidad de Barcelona, 08071 Barcelona, Spain
Received 12 October 1999/Returned for modification 29 November
1999/Accepted 14 January 2000
One representative recombinant clone encoding Klebsiella
pneumoniae O5-antigen lipopolysaccharide (LPS) was found upon
screening for serum resistance in a cosmid-based genomic library of
K. pneumoniae KT769 (O5:K57) introduced into
Escherichia coli DH5 The O antigen is the most external
component of lipopolysaccharide (LPS) and consists of a polymer of
oligosaccharide repeating units. Another interesting feature is the
high chemical variability shown by the O antigen, leading to a similar
genetic variation in the genes involved in O-antigen biosynthesis, the
so called wb (rfb) cluster (for reviews, see
references 35 and 45). The
genetics of O-antigen biosynthesis have been intensively studied in the
family Enterobacteriaceae, and it has been shown that the wb clusters usually contain genes involved in biosynthesis
of activated sugars, glycosyl transferases, O-antigen polymerases, and
O-antigen export (35, 45).
Escherichia coli DH5 In a recent study of the prevalence of the O serogroups among clinical
Klebsiella isolates from different sources and countries, serogroup O5 represented 9% of the isolates (13). The
chemical structure of the Klebsiella O5-antigen LPS was
reported (20) to be a homopolymer of mannose: In this work, we cloned and sequenced the wbO5
gene cluster of Klebsiella pneumoniae to obtain genetically
well-characterized mutants devoid of this O5-antigen LPS. Finally,
using these O5 Bacterial strains, plasmids and growth conditions.
The
bacterial strains, cosmids, and plasmids used are listed in Table
1. Bacteria were grown in Luria-Bertani
(LB)-Miller broth and LB-Miller agar (26). The LB media were
supplemented with ampicillin (100 µg/ml), chloramphenicol (25 µg/ml), kanamycin (30 µg/ml), tetracycline (20 µg/ml), or
rifampin (100 µg/ml) when needed.
0019-9567/00/$04.00+0
Copyright © 2000, American Society for Microbiology. All rights reserved.
Cloning and Sequencing of the Klebsiella pneumoniae O5
wb Gene Cluster and Its Role in Pathogenesis
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ABSTRACT
Top
Abstract
Introduction
Materials and Methods
Results and Discussion
References
. A total of eight open reading
frames (wbO5 gene cluster) were necessary to
produce K. pneumoniae O5-antigen LPS in E. coli
K-12. The enzymatic activities proposed for the
wbO5 gene cluster are in agreement with the
activities proposed for the biosynthesis of K. pneumoniae O5-antigen LPS. Using the complete DNA sequence of the K. pneumoniae wbO5 gene cluster, we obtained (by single
or double recombination) genetically well-characterized mutants devoid
only of this O5-antigen LPS. Finally, using these O5
mutants and the corresponding wild-type strains or complemented mutants
with the wbO5 gene cluster (O5+
strains), we found that the presence of K. pneumoniae
O5-antigen LPS is essential for some pathogenic features like serum
resistance, adhesion to uroepithelial cells, and colonization
(experimental infections) of the urinary tract in rats.
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INTRODUCTION
Top
Abstract
Introduction
Materials and Methods
Results and Discussion
References
and other K-12-derived strains are
rough, unable to produce O-antigen LPS (O
) and serum
sensitive. As we and other authors have previously shown for different
gram-negative bacteria (10, 24), the presence of O-antigen
LPS (smooth phenotype) is a determinant for serum resistance. We used
this characteristic to clone O-antigen LPSs from different bacteria in
E. coli DH5
.
3-D-Manp1
2-D-Manp1
3-D-Manp1
2-D-Manp1
2-D-Manp1
. Despite the similarity in
chemical composition to the Klebsiella O3-antigen LPS, also
a homopolymer of mannose (5), no cross-reactivity was
observed for O5- and O3-antigen LPS with specific antibodies
(13), in spite of the high heterogeneity of the O3 serogroup
strains of this bacterium (13).
mutants and their corresponding wild-type
strains or complemented mutants with the wbO5
gene cluster (O5+ strains), we studied some pathogenic
features of the K. pneumoniae O5-antigen LPS.
![]()
MATERIALS AND METHODS
Top
Abstract
Introduction
Materials and Methods
Results and Discussion
References
TABLE 1.
Bacterial strains, cosmids and plasmids used in
this study
General DNA methods. DNA manipulations were carried out essentially as previously described (33). DNA restriction endonucleases, T4 DNA ligase, E. coli DNA polymerase (Klenow fragment), and alkaline phosphatase were used as recommended by the suppliers. Recombinant clones were selected on LB-Miller agar plates containing the appropriate antibiotics.
Construction of a K. pneumoniae KT769 genomic
library.
K. pneumoniae KT769 genomic DNA was isolated and
partially digested with Sau3A as described by Sambrook et
al. (33). Cosmid pLA2917 (1) was digested with
BglII, dephosphorylated, and ligated to Sau3A
genomic DNA fragments. DNA packaging by using Gigapack Gold III
(Stratagene) and infection of E. coli DH5
were carried
out as previously described (11). Recombinant clones were
selected on LB-Miller agar plates supplemented with tetracycline (20 µg/ml).
Construction of mutant strains KT769-1 (wbdC) and KT769-6 (wzm-wzt). Two different mutant strains of K. pneumoniae KT769 were constructed. To obtain mutant KT769-1 (insertion in the wbdC gene), a method based on suicide plasmid pFS100 was used which renders two incomplete copies of the gene (30). A wbdC internal DNA fragment (697 bp) was amplified from CosKT4 using oligonucleotides 5'-CACTCGGATATTGTGAAAC-3' and 5'-TCTTCAAAACGACGACGC-3'; isolated; ligated to EcoRV-digested, blunt-ended, and dephosphorylated pSF100; and transformed into E. coli MC1961(pir) to generate plasmid pJT80. Plasmid pJT80 was isolated, transformed into E. coli SM10(pir), and transferred by conjugation to a KT769 rifampin-resistant (Rifr) mutant (from our laboratory collection) as previously described (30).
To obtain mutant KT769-6, the method of Link et al. (21) was used to create an in frame deletion encompassing both the wzm and wzt genes. Briefly, CosKT4 and primer pairs A (5'-CGCGGATCCCAGGAAGACGCCATTTACGG-3') plus B (5'-TGTTTAAGTTTAGTGGATGGGTGTAAAACGAGCCATAACGCG-3') and C (5'-CCCATCCACTAAACTTAAACAGTCGTTAACACGGAACAACAAG-3') plus D(5'-CGCGGATCCAGGTCCCGACGCTTACATTC-3') were used in two sets of asymmetric PCRs to amplify DNA fragments of 567 bp (AB) and 555 bp (CD). DNA fragments AB and CD were annealed at their overlapping region and amplified by PCR as a single fragment, using primers A and D (1,101 bp). The fusion product was purified, BamHI digested, ligated into BamHI-digested and phosphatase-treated pKO3 vector (21), electroporated into E. coli DH5, and plated on chloramphenicol-containing plates at 30°C to obtain plasmid pJT86. The PCR amplification procedures and mutant construction by gene replacement, using plasmid pJT86, were exactly as described by Link et al. (21).DNA sequencing. Double-stranded DNA sequencing was performed by using the Sanger dideoxy-chain termination method (34) with the ABI Prism dye terminator cycle-sequencing kit (Perkin-Elmer). Primers used for DNA sequencing were purchased from Pharmacia LKB Biotechnology. Primers 5'-GACTGGGCGGTTTTATGG-3' and 5'-CCATCTTGTTCAATCATGCA-3', designed by us from the known sequence in our laboratory of cosmid pLA2917, were used to sequence the inserts in the BglII restriction site on pLA2917.
DNA and protein sequence analysis. The DNA sequence was translated in all six frames, and all open reading frames (ORFs) greater than 100 bp were inspected. The deduced amino acid sequences were compared with those of DNA translated in all six frames from nonredundant GenBank and EMBL databases by using the BLAST network service at the National Center for Biotechnology Information (2). Multiple sequence alignments were carried out using the Clustal W program (39). Possible terminator sequences were identified by using the Terminator program from the Genetics Computer Group (Madison, Wis.) package in a VAX 4300. Hydropathy profiles were calculated by the method of Kyte and Doolitle (17).
Cell surface isolation and analysis. Cell envelopes were prepared by lysis of whole cells in a French press at 16,000 lb/in2. Unbroken cells were removed by centrifugation at 10,000 × g for 10 min, and the envelope fraction was collected by centrifugation at 100,000 × g for 2 h. Cytoplasmic membranes were solubilized twice with sodium N-lauroyl sarcosinate, and the outer membrane (OM) fraction was collected as described above. OM proteins were analyzed by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) by the Laemmli procedure (18). Protein-containing gels were fixed and stained with Coomassie blue. LPS was purified by the method of Westphal and Jann (44). For screening purposes, LPS was obtained after proteinase K digestion of whole cells by the procedure of Darveau and Hancock (6). SDS-PAGE was performed, and LPS bands were detected by the silver-staining method of Tsai and Frasch (42).
Antisera. Anti-K. pneumoniae O5 LPS serum was obtained using purified K. pneumoniae O5 LPS, adsorbed by a K. pneumoniae rough mutant (KT141) (13), and assayed as previously described for other LPSs (24, 40).
Western immunoblotting. After SDS-PAGE, immunoblotting was carried out by transfer to polyvinylidene difluoride membranes (Millipore Corp., Bedford, Mass.) at 1.3 A for 1 h in the buffer of Towbin et al. (41). The membranes were then incubated sequentially with 1% bovine serum albumin, specific anti-O antiserum (1:500), alkaline phosphatase-labeled goat anti-rabbit immunoglobulin G, and 5-bromo-4-chloro-indolylphosphate disodium-nitroblue tetrazolium. Incubations were carried out for 1 h, and washing steps with 0.05% Tween 20 in phosphate-buffered saline (PBS) were included after each incubation step. Colony blotting was performed using K. pneumoniae O5 antiserum as indicated above.
Serum killing. The survival of exponential-phase bacteria in nonimmune human serum was measured as previously described in a 90% serum in PBS after 3 h of incubation at 37°C, taking samples for viable counts every 30 min (24), or by a microtiter plate-based assay for screening (43).
Cell surface hydrophobicity. Cell surface hydrophobicity was determined by two different methods. The first method used was hydrophobic interaction chromatography (HIC) on phenyl-Sepharose as previously described (14). Briefly, bacteria were resuspended in 10 mM PBS (pH 7.4) to an optical density at 470 nm (OD470) of 1.0, applied to a phenyl-Sepharose column, and eluted with 4 M NaCl. The eluate was collected, and its OD470 was determined.
The second method used was the bacterial adherence to hydrocarbons (BATH) method, as previously described (29). Briefly, cells were washed twice in phosphate-urea-magnesium buffer (pH 7.1), suspended in the same buffer at an OD400 of 1.0, and vortexed with various volumes of hydrocarbon. The OD400 of the aqueous phase was expressed as a percentage of the OD400 of a standard volume of untreated cells.Bacterial surface charge. The bacterial surface charge was determined by measurement of the zeta potential using a Zetasizer II (Malvern Instruments, Malvern, United Kingdom).
Bacterial adherence assay. The assay measuring the adherence of K. pneumoniae strains to uroepithelial cells (UEC) was done as described by Falkowski et al. (7) and Merino et al. (25). Briefly, samples containing bacteria and UEC (100:1) were incubated for 1 h at 37°C and filtered under vacuum through a 5-µm-pore-size filter. The filters were solubilized to lyse the UEC, and the adherent bacteria were counted by viable plate count determination. In some cases, the adherence was also examined by direct visualization of Gram-stained filters, in which a minimum of 40 UEC were examined.
Urinary tract infections in rats. The bacterial strains used to establish infection were grown overnight in LB-Miller agar (supplemented with antibiotics when needed) and gently suspended in PBS to the appropriate concentration. In each experiment, 12 female Wistar rats (weighing 200 to 250 g) of strain CFHB (Interfauna UK, Huntington, United Kingdom) were used. Ten animals were infected transurethrally in the bladder after voiding urine by gentle compression of the bladder through the external abdominal wall, and two were used as controls. The infections were quantified as previously described (3).
Nucleotide sequence accession number. The nucleotide sequence of the genes described here have been assigned GenBank accession no. AF189151.
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RESULTS AND DISCUSSION |
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Cloning of the K. pneumoniae (O5:K57) O5-antigen LPS
genomic region that confers serum resistance to E. coli
K-12.
K. pneumoniae (O5:K57) strain KT769 is
characterized, like other encapsulated and smooth strains, by being
serum resistant (24), while E. coli K-12 strains
like DH5
are serum sensitive. A cosmid-based genomic library of
Klebsiella strain KT769 chromosomal DNA was
constructed and introduced into E. coli DH5
,
and recombinants were selected on LB-Miller agar plus
tetracycline. Several serum-resistant clones were isolated using
a microtiter plate-based assay (43); CosKT4 was one of the
clones which conferred the highest serum resistance to E. coli DH5
(data not shown). DH5
harboring CosKT4 was
characterized by analysis of the OM protein and LPS profile on
SDS-PAGE. No major differences were found in the OM protein pattern,
but cosmid CosKT4 conferred K. pneumoniae O5-antigen LPS
production to E. coli DH5
. Of course, no antigen was
detected on DH5
with or without the cosmid pLA2917 (Fig.
1A). CosKT4 was cured from the recipient
strain DH5
by serial growth without antibiotics, single-colony
isolation, and testing for antibiotic sensitivity and lack of the
plasmid DNA. The cured strains lacked the O5-antigen LPS in gels (Fig.
1A) and became serum sensitive, like DH5
(with or without cosmid
pLA2917). When CosKT4 was transferred to E. coli CLM4 (a
strain with the wb cluster deleted [22]), it was able to confer O5-antigen LPS production to this strain. This
result suggested that CosKT4 contains all the genetic information necessary for O5-antigen production (Fig. 1).
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Subcloning and sequencing of CosKT4.
We tried to subclone the
genes responsible for the biosynthesis of O5-antigen LPS from CosKT4
using different restriction enzymes and plasmid vectors commonly used
in other cases, such as K. pneumoniae O1 or O8 antigen-LPS,
but these attempts were unsuccessful. For this reason, we used
oligonucleotides flanking the BglII pLA2917 cosmid site (see
Materials and Methods). This sequence rendered a high degree of
homology to hisIE genes in one of the ends, and the presence
of wb O5 genes in CosKT4 was confirmed by using the
oligonucleotide primers from the boundary region of the K. pneumoniae O5 wb (wbdC) and
his genes described by Sugiyama et al. (37).
Other sequence-derived oligonucleotides were used to complete
the nucleotide sequence. A total of eight complete ORFs were
determined, and their characteristics are shown in Table
2. Upstream of each ORF, putative
ribosomal binding sequence were found. On the other hand, no
Rho-independent transcription termination similar sequences were found
among the eight ORFs. This feature, plus the overlap between the ORF5
stop codon and the ORF6 initial codon and the short spacing (no
spacing among ORF3, ORF4, and ORF5) between the eight ORFs, strongly
suggested that these ORFs are part of a transcriptional unit. The last
(truncated) ORF, ORF9, was found to be similar to hisI
from several members of the Enterobacteriaceae and was
unrelated to the wbO5 cluster. In other
wb gene clusters, a similar situation was found, with a
hisI gene transcribed into opposite direction from the
wb operon.
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Analysis of the ORF deduced amino acid sequence.
The analysis
of the ORF deduced amino acid sequences showed that the ORF1 and ORF2
products are highly similar to two enzymes involved in the biosynthesis
of the mannose (Table 3).
Accordingly we suggest that ORF1 and ORF2 correspond respectively to
the manC and manB genes, encoding GDP-mannose
pyrophosphorylase or mannose-1-phosphate guanyltransferase and
phosphomannomutase, respectively (36). The ORF3 and ORF4
products are similar to the ATP binding cassette 2 (ABC-2)-type
transport system integral membrane and ATP binding proteins,
respectively (Table 3). Exporter systems similar to the ORF3-ORF4
system are involved in export of O antigen, except for ATP binding
protein AbcA, which is involved in A-protein expression (4).
The putative exporter component (the ORF3 product) showed a 96% level
of amino acid similarity to the corresponding Wzm protein involved in
E. coli O9a antigen export, while the putative ATP-binding
component showed 45% similarity to the ATP binding protein AbcA
involved in Aeromonas salmonicida A-protein expression (4) and 35 to 40% similarity to several ATP binding
proteins (Wzt) involved in capsule or LPS biosynthesis. Hydrophobicity analysis and identification of putative transmembrane domains of Wzm
protein (amino acid residues 29 to 51, 76 to 98, 112 to 134, 145 to
167, and 197 to 218) by the method of Klein et al. (16)
suggested that this protein is indeed an integral membrane protein. On
the other hand, the sequence GINGAGKS (residues 58 to 65) from Wzt was
found to correspond to box A, a motif present in ATP binding proteins,
as well as the ABC transporter family signature YSSGMQVRLAFSVAT
(residues 146 to 160). Thus, ORF3 and ORF4 have been named the
wzm and wzt genes, respectively.
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2-D-Manp1), B
(
3-D-Manp1) and C (initial,

3-D-Manp1 depending on wecA),
respectively (15). The high levels of amino acid
identity strongly suggest that these ORFs encoded the same enzymes in
the K. pneumoniae O5 biosynthesis, which prompted to us
to name the ORF6 to ORF8 products WbdA to WbdC, respectively. The
enzymatic activities proposed for the wbO5
cluster are in agreement with those proposed for the biosynthesis of
K. pneumoniae O5-antigen LPS.
The final truncated ORF9 deduced amino acid sequence showed a high
level of similarity to the product of the hisI gene of E. coli, located at 45.2 min on the E. coli map
(a bifunctional enzyme related to histidine biosynthesis).
Characterization of mutant strains KT769-1 (wbdC) and
KT769-6 (wzm wzt).
Both mutants KT769-1 and KT769-6
were devoid of the O5-antigen LPS in LPS gels and Western blots (Fig.
2), while no other major differences were
observed in their other OM molecules. These mutants contained capsular
polysaccharide, which reacts with K57 antiserum like the wild-type
strain and the rifampin-resistant mutant. However, there are some
differences among the mutants; while KT769-1 is unable to form
O5-antigen LPS, KT769-6 is able to form this antigen but is unable to
transport it to the OM (instead, it is accumulated in the inner
membrane) (data not shown). This situation for wzm wzt
mutants was described previously (32). When CosKT4 was
transferred by mating, it was able to complement both mutants,
rendering them able to biosynthesize the O5-antigen LPS, as in LPS gels
and Western blots (Fig. 2).
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Contribution of the O5-antigen LPS to pathogenic features. Taking advantage of the isogenic mutants obtained lacking only the O5-antigen LPS (KT769-1 and KT769-6) and the complementation of these mutants by CosKT4 (KT769-1C and KT769-6C, showing a complete O5-antigen LPS), we decide to investigate the contribution of this molecule to pathogenic features. Some of these pathogenic features have been previously described in studies of K. pneumoniae O1-antigen LPS using spontaneous phage resistance mutants, but they have not genetically characterized.
As observed in Fig. 3, mutant strains KT769-1 and KT769-6 are sensitive to the bactericidal activity of nonimmune human serum, while the wild-type strain as well as the CosKT4-complemented mutants (KT769-1C and KT769-6C, respectively) are resistant to this activity. Because the mutants showed a complete LPS core, we demonstrated that the K. pneumoniae O5-antigen LPS, as with O1-antigen LPS from the same bacterium (24) or from other members of the Enterobacteriaceae, is critical for complement resistance (8, 38). We suggested that the reasons for complement resistance in K. pneumoniae O5+ strains are the same as we described for O1+ strains (24). The mutants that lacked the O5-antigen LPS also showed an increase (less electronegative) in their surface charge as measured in millivolts (
40.6 ± 0.4 mV) in comparison with the wild-type
strain or the strains that recovered the O5-antigen LPS with plasmid
CosKT4 (
52.8 ± 0.5 mV). This surface charge increase is
explained by the loss of negative surface molecules like the O5-antigen
polysaccharide chains. The change in the surface charge leads to
changes in the surface hydrophobicity of the O5
mutants.
As shown in Table 4, the surface
hydrophobicity of O5
mutants, as measured by several
methods, is increased (more hydrophobic) with respect to that of the
O5+ strains (wild type or COS-KT4 complemented mutants).
Also, the reason for this change is the loss of a hydrophilic molecule, as with the O5-antigen LPS. However, HIC seems to be a more sensitive technique to assay the surface hydrophobicity on these mutants than is
BATH, which seems to be more useful with n-xylene than with
hexadecane (Table 4), perhaps because the n-xylene is a more
penetrating agent than the hexadecane and these mutants are only devoid
of the O5-antigen LPS but are encapsulated (K57).
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ACKNOWLEDGMENTS |
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This work was supported by grants from DGICYT and Plan Nacional de I+D (Ministerio de Educación y Cultura, Madrid, Spain). L.I., M.M.N., and M.A. were supported by fellowships from the Ministerio de Educación y Cultura, Generalitat de Catalunya, and University of Barcelona, respectively.
We thank Maite Polo for her technical assistance.
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FOOTNOTES |
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* Corresponding author. Mailing address: Departamento de Microbiología, Facultad de Biología, Universidad de Barcelona, Diagonal 645, 08071 Barcelona, Spain. Phone: 34-934021486. Fax: 34-93-4110592. E-mail: juant{at}porthos.bio.ub.es.
Editor: A. D. O'Brien
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