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Infection and Immunity, June 2000, p. 3780-3783, Vol. 68, No. 6
Department of Microbiology, Monash
University, Clayton, Victoria, 3800,1 and
Department of Microbiology and Infectious Diseases, Royal
Children's Hospital, Parkville, Victoria,
3052,2 Australia, and Department of
Bacteriology, Institute of Medical Science, University of Tokyo,
Minato-ku, Tokyo 108-0071, Japan3
Received 15 October 1999/Returned for modification 15 November
1999/Accepted 3 March 2000
An unstable chromosomal element encoding multiple antibiotic
resistance in Shigella flexneri serotype 2a was found to
include sequences homologous to the csg genes encoding
curli in Escherichia coli and Salmonella
enterica serovar Typhimurium. As curli have been implicated in
the virulence of serovar Typhimurium, we investigated the
csg loci in all four species of Shigella. DNA
sequencing and PCR analysis showed that the csg loci of a
wide range of Shigella strains, of diverse serotypes and
different geographical distributions, were almost universally disrupted
by deletions or insertions, indicating the existence of a strong
selective pressure against the expression of curli. Strains of
enteroinvasive E. coli (EIEC), which share virulence traits
with Shigella spp. and cause similar diseases in humans,
also possessed insertions or deletions in the csg locus or
were otherwise unable to produce curli. Since the production of curli
is a widespread trait in environmental isolates of E. coli,
our results suggest that genetic lesions that abolish curli production
in the closely related genus Shigella and in EIEC are
pathoadaptive mutations.
Bacillary dysentery is a severe
diarrheal disease affecting hundreds of millions of people worldwide,
leading to more than 500,000 deaths annually (11). The
disease is caused by four bacterial species comprising the genus
Shigella, i.e., Shigella flexneri, S. dysenteriae, S. sonnei, and S. boydii.
Shigella spp. are transmitted to their hosts via the fecal-oral
route and infect the colonic epithelium. Subsequent cell destruction,
inflammation, and ulceration of the colon are responsible for the
bloody, mucoid diarrhea that is characteristic of the disease. In
recent years much has been learned about the sophisticated virulence
mechanisms that allow Shigella to invade epithelial cells
and spread to neighboring cells (5). However, nothing is
known about the first step in the infection process, colonization of
the host.
Bacterial colonization of the host intestine is generally mediated by
fimbrial adhesins (2, 3, 8, 10). However, it is not clear
what role fimbriae play in the virulence of Shigella (22). Over the last decade, Escherichia coli and
Salmonella spp. have been found to express a surface
structure termed thin aggregative fimbriae or curli (14, 20,
21). In E. coli, curli mediate the formation of
biofilms on inert surfaces (26). However, in
Salmonella enterica serovar Typhimurium, curli mediate bacterial attachment to mouse intestinal cells in vitro
(25), and the expression of curli at 37°C is a
phase-variable characteristic that is essential for full virulence in
mice (24). These findings demonstrate that curli probably
have a role in the colonization of the mouse intestine by serovar
Typhimurium. Furthermore, curli are capable of mediating bacterial
binding to a wide variety of tissues (15), cell matrix
proteins, and plasma proteins (13, 14) and may therefore
have additional roles in virulence.
During investigations of a deletable chromosomal element encoding
multiple antibiotic resistance in S. flexneri serotype 2a (17, 18), members of our group discovered a locus with high sequence similarity to the csg gene clusters encoding curli
in E. coli and serovar Typhimurium. This preliminary
finding prompted us to investigate the presence of csg loci
in a variety of Shigella strains.
Restriction analysis and DNA sample sequencing of csg
loci in Shigella.
To test whether the csg locus
was present in all four species of Shigella, oligonucleotide
primers were designed for the PCR amplification of an internal portion
of the csg locus. Primer 4477 was homologous to a
5'-terminal sequence of the csgE gene of E. coli
K-12, while primer 4480 was homologous to a 3'-terminal sequence of
csgA (Fig. 1). PCR
amplification of the csg internal fragment from the E. coli control strain, DH5
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Copyright © 2000, American Society for Microbiology. All rights reserved.
Curli Loci of Shigella spp.
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(9), generated a DNA
fragment of 2.4 kb, the length predicted from sequence analysis of the
E. coli K-12 csg locus (GenBank accession no.
X90754). Similarly, a 2.4-kb fragment was amplified from S. dysenteriae serotype 3 strain SBA1304. However, fragments of 3.6, 4.0, and 2.15 kb were amplified from S. flexneri serotype 2a
(SBA1100), S. sonnei (SBA1302), and S. boydii
serotype 3 (SBA1308), respectively. These results implied that the
csg locus was present in all four species of
Shigella but had acquired insertions or undergone internal duplications in S. flexneri and S. sonnei, while
the S. boydii csg locus appeared to have undergone a
deletion.

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FIG. 1.
Deletion and insertion mutations in the csg
loci of Shigella spp. Restriction maps of the internal
portion of the csg locus, spanning the 5' terminus of
csgE and the 3' terminus of csgA, are shown for
four strains of Shigella. The positions of ISs and deletions
in relation to the csg genes are indicated by dashed lines.
The 250-bp deletion in the S. boydii (SBA1308)
csg gene lies within a 350-bp region indicated by a
horizontal bracket. The positions of promoters for the
csgBAC and csgDEFG operons are indicated by bent
arrows. The binding sites for primers are indicated by open arrows.
Restriction sites include HindIII (H), PstI
(P), and EcoRV (V). Primer sequences are as follows: 4477, 5'-GCGGCGAACAGAAATTCTGCC-3'; 4480, 5'-GTTACCAAAGCCAACCTGAGTCACG-3'; BAP1021,
5'-TCAGGATTCCGGTGGAAC-3'; BAP1022,
5'-TTAAGACTTTTCTGAAGAGG-3'; BAP1023,
5'-CAGCGAAAATACGGTTAAAACGC-3'; BAP1232,
5'-TCCTGCTCAAAGTATCCTGCC-3'); and BAP1233,
GATTGCTGCAATTGCTGCTAC-3'.
,
suggesting that a deletion had occurred in the S. boydii csg
locus. In order to locate the site of the predicted 250-bp deletion,
the 2.15-kb PCR product was sequenced with primers 4477 and 4480 and
the two internal primers BAP1232 and BAP1233 (Fig. 1). Sequencing
showed that the deletion had occurred within a 350-bp region which
included most of the csgB open reading frame (Fig. 1).
Although no deletions or insertions were evident from PCR analysis of
the S. dysenteriae serotype 3 csg locus, the
primers used did not encompass the entire csg locus. This
left open the possibility that mutations existed in other parts of the
locus. To address this question, primers BAP1021 and BAP1022 were used to PCR amplify the entire csg locus of S. dysenteriae (Fig. 1). PCR products of 4.4 kb, the expected length
of the intact E. coli csg locus, were amplified from DH5
and the curliated E. coli strains YMel (19) and
7122 (16). However, a product of approximately 6 kb was
amplified from S. dysenteriae serotype 3, suggesting that
one or more IS elements may have inserted into the locus, outside of
the region previously investigated. To determine the sites of the
proposed insertion, the 6-kb PCR product was sequenced with primers
BAP1021, BAP1022, and BAP1023 (Fig. 1). Sequence analysis showed that
an IS1 element had inserted downstream of nucleotide 98 in
the csgE gene, while an IS600 element had
inserted downstream of nucleotide 71 of the csgC gene.
Survey of insertion and deletion mutations in the csg
locus of Shigella strains.
Initial analysis of the
four Shigella strains representing each species suggested
that mutations within the csg locus are probably widespread
phenomena. To test this hypothesis, 43 Shigella strains,
representing a wide range of serotypes isolated over several years from
patients in Australia and Japan, were surveyed by colony PCR with the
primers BAP1021 and BAP1022, which flank the complete csg
locus. The results (Table 1) demonstrated
that insertions into the csg locus are widespread in
Shigella spp. The size variation in the csg loci
suggests that different types of insertion events have occurred. The
smaller PCR products are consistent with the insertion of single IS
elements, while the larger products (6.4 to 7.4 kb) are consistent with
the insertion of multiple IS elements similar to those in S. dysenteriae serotype 3 strain SBA1304 and S. sonnei
strain SBA1302 (Fig. 1). However, in many strains the csg
locus was either partially deleted or not detected at all.
|
7122, were grown on CFA
agar (4) for 48 h at 25°C and were negatively stained
with ammonium phosphotungstate for examination by electron microscopy
as previously described (7). Although curli were clearly
visible on the positive control E. coli strains, they were
not produced by SBA1385 (data not shown). The most likely explanations
for the absence of curli in SBA1385 include the possibility of point
mutations or small deletions that were undetectable by agarose gel
electrophoresis. Alternatively, the absence of curli may have been due
to extragenic mutations such as those in rpoS, which are
known to affect curli expression in E. coli (13).
Significance of mutations in the csg loci of
Shigella strains.
The insertion and precise excision
of IS elements into genes have been described as a possible mechanism
for the control of gene expression. However, this is only likely to be
significant when insertion and excision occur at high frequencies. For
example, the expression of exopolysaccharide synthesis in
Pseudomonas atlantica is mediated by an IS element
that excises from the eps locus at frequencies as high as
0.5 (1). This generates genetically distinct subpopulations
that are preadapted to environmental change (1). In
contrast, precise excision of IS1 in E. coli
occurs at frequencies of less than 10
5 (12).
Furthermore, since it appears that curli loci in Shigella are often interrupted by multiple IS elements, the restoration of curli
expression by the simultaneous excision of more than one IS element
seems unlikely. Rather than being involved in the control of curli
expression, we propose that insertions into the csg locus
are common because of a strong selection against the expression of
curli in Shigella. This is supported by the finding that up
to a quarter of Shigella strains may have partial or
complete deletions of the csg locus.
7122, clearly produced curli. In
contrast, curli were not produced by any of the EIEC strains (data not
shown). These results are consistent with the previous finding that
EIEC strains do not bind fibronectin (13), a characteristic
associated with curli in E. coli.
Our work demonstrates that there is a strong selective pressure against
the maintenance of curli in EIEC, as in Shigella spp. The
observation that curli are expressed in 60% of environmental isolates
of E. coli (13) but are absent from all strains
of the closely related genus Shigella and EIEC, two
bacterial groups with very similar mechanisms of pathogenesis, supports
the hypothesis that mutations abolishing curli expression in these
strains are pathoadaptive.
Nucleotide sequence accession numbers. Nucleotide sequences of the sites of IS element insertion into the csg locus have been deposited into the GenBank database under the accession numbers AF237724, AF237725, AF237726, and AF237727.
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ACKNOWLEDGMENTS |
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We are very grateful to D. Lightfoot for supplying Shigella strains, Roy Robbins-Browne for supplying EIEC strains, and Arne Olsen and Roy Curtiss for supplying curliated E. coli strains.
This work was supported by a grant from the National Health and Medical Research Council, Canberra, Australia.
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FOOTNOTES |
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* Corresponding author. Mailing address: Department of Microbiology, Monash University, Victoria, 3800, Australia. Phone: 61 3 9344 2000. Fax: 61 3 9345 5764. E-mail: kumar.rajakumar{at}med.monash.edu.au.
Editor: A. D. O'Brien
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