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Infection and Immunity, April 2001, p. 2766-2771, Vol. 69, No. 4
0019-9567/01/$04.00+0 DOI: 10.1128/IAI.69.4.2766-2771.2001
Copyright © 2001, American Society for Microbiology. All rights reserved.
HLA-A*01-Restricted Cytotoxic T-Lymphocyte
Epitope from the Plasmodium falciparum
Circumsporozoite Protein
Anita
Kumar,1,2,*
Sanjai
Kumar,1,3
Thong P.
Le,1,4
Scott
Southwood,5
John
Sidney,5
Joe
Cohen,6
Alessandro
Sette,5 and
Stephen L.
Hoffman1
Malaria Program, Naval Medical Research
Center, Silver Spring, Maryland 20910-75001;
Henry M. Jackson Foundation, Rockville, Maryland
208522; Department of Molecular
Microbiology and Immunology, Johns Hopkins University, Baltimore,
Maryland 212053; Department of
Medicine, St. Luke's Hospital, Bethlehem, Pennsylvania
180154; Epimmune Inc., San Diego,
California 921215; and SmithKline
Beecham Biologicals, Rixensart, Belgium6
Received 1 August 2000/Returned for modification 7 September
2000/Accepted 18 January 2001
 |
ABSTRACT |
Here, we report the identification of a novel CD8+
cytotoxic T-lymphocyte epitope on the Plasmodium falciparum
circumsporozoite protein (3D7; amino acids 310 to 319 [EPSDKHIKEY])
that is restricted by HLA-A*01 and is recognized by human volunteers
immunized with irradiated P. falciparum sporozoites.
HLA-A*01 is the second most common HLA allele among Caucasians.
 |
TEXT |
Sterile protective immunity against
malaria in humans is induced by immunization with irradiated
Plasmodium falciparum sporozoites (1, 2, 7, 9,
19), is dependent on CD8+ T cells (5, 20,
27), and is presumed to be directed against antigens expressed
by irradiated sporozoites in infected hepatocytes (10,
11). Accordingly, a major approach to developing a malaria vaccine that duplicates the excellent protection induced by the irradiated sporozoite vaccine is to identify CD8+ T-cell
epitopes on parasite proteins expressed by irradiated sporozoites in
hepatocytes (10, 17). To date, 32 P. falciparum CD8+ T-cell epitopes derived from five proteins known to be
expressed in infected hepatocytes have been reported
(6; Table 1).
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TABLE 1.
CD8+ CTL epitopes on P. falciparum
preerythrocytic-stage proteins recognized by T cells from volunteers
immunized with radiation-attenuated P. falciparum
sporozoites
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|
One potential challenge to the development of epitope-based vaccines is
the polymorphism of major histocompatibility complex (MHC) class I
molecules. Many HLA-A molecules can be grouped into different HLA
supertypes which are characterized by largely overlapping peptide-binding repertoires and are present in high frequencies, irrespective of the particular ethnicity considered. Focusing on the
major HLA supertypes generally simplifies the process of development of
epitope-based vaccines (21, 22, 24). HLA-A1 is one of five
HLA antigens (A1, A2, A3, A11, and A24) expressed in a high proportion
of different populations (12, 24) and is the second most
common antigen expressed by Caucasians (26 to 36.5%), after HLA-A2 (42 to 64%) (6; Table 2).
Recent data also suggest that HLA-A*01 might represent a prototype
allele of an HLA-A1 supertype composed of several alleles with similar peptide-binding motifs (22). Thus, HLA-A*01-restricted
epitopes should be considered for inclusion in multiepitope
peptide-based vaccines.
Accordingly, we searched the P. falciparum circumsporozoite
protein (PfCSP) 3D7 sequence for sequences containing potential HLA-A*01 binding motifs, specifically a threonine (T), serine (S), or
methionine (M) at position 2 or an aspartic acid (D), glutamic acid
(E), serine (S), or threonine (T) at position 3 and a tyrosine (Y) at
the C terminus (3, 13-15). Two peptides, amino acids (aa)
31 to 40 (NTRVLNELNY) and aa 310 to 319 (EPSDKHIKEY), predicted to
contain an HLA-A*01 peptide-binding motif were synthesized and analyzed
for their affinity of binding (23, 25) to HLA-A*01. Peptides which bound to HLA-A*01 with high affinity (50% inhibitory concentration [IC50], 500 nM) were then assessed for
their capacity to induce peptide-specific recall cytotoxic T-lymphocyte
(CTL) responses from peripheral blood mononuclear cells (PBMC) from three volunteers expressing the HLA-A*01 molecule (Table
3) (7) and immunized with
P. falciparum irradiated sporozoites.
Generation of effector cells.
PBMC from irradiated
sporozoite-immunized volunteers were infected with recombinant vaccinia
virus expressing the entire PfCSP 3D7 sequence at 10 PFU/cell
(16) or stimulated with 10 µg of synthetic PfCSP peptide
(aa 310 to 319 [EPSDKHIKEY]) per ml for 6 days as described
previously (16). In some experiments effector cell
populations were depleted of CD8+ T cells using
anti-CD8+-coated Dynabeads.
CTL assay.
CTL assays and transient transfection of autologous
and HLA-mismatched lymphoblastoid B-cell lines (B-LCL) were performed as described previously (16) using plasmid DNA expressing
the 3D7 PfCSP gene (VR2510) or the same plasmid without the PfCSP insert (VR1020) (8) or autologous and HLA-mismatched B-LCL pulsed at 10 µg/ml with peptide PfCSP 3D7 (aa 310 to 319) or control peptide from P. falciparum sporozoite
surface protein 2 (PfSSP2 [RRHNWVNHA]) (28).
The studies reported herein were conducted in accordance with U.S. Navy
regulations governing the protection of human subjects
in medical
research. The research protocols employing human subjects
in this study
were reviewed and approved by the Naval Medical
Research Institute's
Committee for the Protection of Human Subjects
and the Walter Reed Army
Institute of Research Human Use
Committee.
Antigen-specific CD8+ CTL against endogenously
synthesized PfCSP are induced in HLA-A*01-irradiated
sporozoite-immunized volunteers.
To determine whether immunization
with radiation-attenuated P. falciparum sporozoites could
generate anti-PfCSP CTL responses in HLA-A*01 individuals (Table 3),
and if so, whether such CTL would recognize endogenously synthesized
antigen, immune PBMC from irradiated sporozoite-immunized volunteers
(4, 16, 17) were stimulated in vitro with autologous
PBMC infected with recombinant PfCSP-expressing vaccinia virus.
Cytolytic activity was assessed against autologous or HLA-mismatched
B-LCL transiently transfected with PfCSP-encoding DNA (VR2510) or
control DNA (VR1020). Effector cells from all three volunteers lysed
autologous B-LCL transiently transfected with PfCSP-encoding DNA (Fig.
1) but not autologous B-LCL transfected
with control DNA or HLA-mismatched B-LCL targets transfected with
PfCSP-encoding DNA. These data demonstrated that an antigen-specific,
HLA-restricted CTL response against endogenously presented PfCSP was
induced in all three HLA-A*01-positive irradiated sporozoite-immunized
volunteers.

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FIG. 1.
CTL lysis of target cells expressing endogenously
synthesized PfCSP. Immune PBMC from volunteer 16 (A), volunteer 4 (B),
and volunteer 17 (C) were stimulated with autologous PBMC infected with
recombinant vaccinia virus expressing the entire gene of PfCSP 3D7
(PfCSP vaccinia). Cytotoxicity was assessed in a CTL assay against
autologous and HLA-mismatched B-LCL transiently transfected with
PfCSP-encoding plasmid DNA (2510) or vector control DNA (1020) at an
80:1 effector/target ratio.
|
|
Identification of an HLA-A*01-restricted epitope on PfCSP 3D7.
We next determined whether these effector cells could recognize either
of two predicted HLA-A*01 epitopes from PfCSP (aa 31 to 40 [NTRVLNELNY] and aa 310 to 319 [EPSDKHIKEY]). Two peptides containing these epitopes were synthesized, and their HLA-A*01 binding
capacity was estimated to be 2,604 and 147 nM, respectively, as
described previously (14, 23). Only one peptide, PfCSP 310-319, bound with an IC50 of less than 500 nM. Based on
our previous work we consider a peptide that binds with an affinity between 50 and 500 nM to be a high binder (23), and
studies have established a correlation between high binding affinity
and immunogenicity (23). Accordingly, PBMC from the
three HLA-A*01 volunteers were stimulated with peptide PfCSP 3D7
310-319. In parallel, PBMC cultures were also stimulated with PBMC
infected with recombinant PfCSP-expressing vaccinia virus. Autologous
B-LCL were pulsed with either the PfCSP 3D7 310-319 peptide or with a
control peptide or were transiently transfected with PfCSP-encoding DNA
(VR2510) or control DNA (VR1020). The CTL response elicited by peptide
PfCSP 3D7 310-319 was peptide specific, since effectors stimulated with
peptide PfCSP 3D7 310-319 lysed targets pulsed with peptide PfCSP 3D7
310-319 but only minimally lysed or failed to lyse targets pulsed with
the control peptide (Fig. 2).
Furthermore, the CTL response was genetically restricted, since no
significant CTL activity was detected when HLA-mismatched targets were
pulsed with peptide PfCSP 3D7 310-319 (Fig. 2A and
3). The CTL response was dependent on
CD8+ T cells, since depletion of CD8+ T cells
from the effector cells eliminated the CTL activity (Fig. 2).

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FIG. 2.
Antigen-specific, MHC-restricted, CD8+
T-cell-dependent CTL activity in HLA-A*01 volunteers. Immune PBMC from
volunteer 4 (A) and volunteer 17 (B) were stimulated with peptide PfCSP
3D7 310-319 (EPSDKHIKEY) (PfCSP peptide) or PfCSP-expressing vaccinia
virus (PfCSP vaccine). Cytotoxicity was assessed in a CTL assay at an
80:1 effector/target ratio. Autologous or HLA-mismatched B-LCL were
pulsed with peptide PfCSP 3D7 310-319 or a control peptide from the
PfSSP2 sequence. Where indicated, cells were depleted of
CD8+ T cells using Dynabeads (PfCSP peptide-CD8).
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FIG. 3.
Antigen-specific, MHC-restricted CTL response in
volunteer 16 (HLA-A*01). Immune PBMC from volunteer 16 were stimulated
with peptide PfCSP 3D7 310-319. Cytolytic activity was then assessed in
a CTL assay at an 80:1 effector/target ratio using autologous and
HLA-mismatched B-LCL transiently transfected targets with a plasmid
expressing PfCSP-encoding DNA (2510) or vector control DNA (1020) as a
negative control.
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|
Recognition of endogenously synthesized PfCSP by peptide PfCSP 3D7
310-319 stimulated immune effectors.
Next, we wanted to assess
whether effector cells induced by the PfCSP 3D7 310-319 peptide could
recognize target cells that endogenously synthesized the PfCSP antigen.
Accordingly, PBMC from volunteer 16 were stimulated with the PfCSP 3D7
310-319 peptide, and autologous B-LCL and HLA-mismatched B-LCL were
transiently transfected with PfCSPs-encoding DNA (VR2510) or control
DNA (VR1020). Data presented in Fig. 3 establish that
peptide-stimulated effectors could recognize endogenously processed
PfCSP, since they lysed autologous B-LCL targets transfected with the
PfCSP gene but not autologous B-LCL transfected with control vector
VR1020. Furthermore, this CTL response was genetically restricted,
since CTL activity could not be detected using HLA-mismatched B-LCL
transfected with the PfCSP gene (Fig. 3).
In summary, our data demonstrate for the first time that HLA-A*01
volunteers immunized with
P. falciparum irradiated
sporozoites
generate a specific CD8
+ CTL response which
recognizes a 10-amino-acid peptide, PfCSP
3D7 310-319 (EPSDKHIKEY). The peptide contains an HLA-A*01 motif
and
binds to the purified HLA-A*01 molecule with high affinity.
This is the
first HLA-A*01-restricted CTL epitope identified on
PfCSP or on any
malaria
protein.
It has been reported that CD4
+T cells from malaria-exposed
individuals may respond to stimulation with synthetic peptides but
not
to native parasite (
18), suggesting that endogenously
produced
protein may be processed differently than synthetic peptides.
Our data demonstrate that the PfCSP 3D7 310-319 epitope is recognized
by irradiated sporozoite-immunized volunteers following stimulation
with endogenously synthesized PfCSP as a result of infection with
recombinant vaccinia or with PfCSP presented on the surface of
the
target cells by transient transfection. Thus, our data indicate
that
the PfCSP 3D7 310-319 epitope is generated by natural processing
of the
PfCSP antigen. Recently, it has also been shown that CD8
+ T
cells from volunteers immunized with a plasmid DNA vaccine
expressing
PfCSP (
26) recognize this
epitope.
Given the high prevalence of HLA-A*01 and related alleles (HLA-A1
supertype) in the Caucasian population (26 to 36.5%; Table
2) and in
other ethnic groups worldwide (
22) and the fact that
this
epitope is the only reported HLA-A*01-restricted epitope
identified on
PfCSP or on any malaria protein, we believe that
this epitope should be
included in all PfCSP-containing vaccines.
The fact that the HLA-A*01
allele is found in low prevalence in
Africa (4 to 10%) does not
undermine the importance of this epitope
from a vaccine perspective.
Identification and incorporation of
such epitopes in a
multiepitope-based vaccine are necessary to
protect tens of thousands
of individuals bearing this particular
HLA type who annually visit
areas where malaria is endemic. Furthermore,
the peptide containing
this epitope will be important for the
routine evaluation of the
efficacy of experimental PfCSP malaria
vaccines in immunized
volunteers.
 |
ACKNOWLEDGMENTS |
We thank the volunteers who participated in this study and Denise
Doolan for critically reviewing the manuscript.
This work was funded by NMRC work unit numbers 61102A.00101-BFX.1431
and 6287A00101EFX.1432 and in part by a grant from the Belgian Walloon
Region to SmithKline Beecham Biologicals.
 |
FOOTNOTES |
*
Corresponding author. Mailing address: Malaria Program,
Naval Medical Research Center, 503 Robert Grant Ave., RM3W13, Silver Spring, MD 20910-7500. Phone: (301) 319-7572. Fax: (301)
319-7545. E-mail: kumara{at}nmrc.navy.mil.
Editor:
J. M. Mansfield
 |
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Infection and Immunity, April 2001, p. 2766-2771, Vol. 69, No. 4
0019-9567/01/$04.00+0 DOI: 10.1128/IAI.69.4.2766-2771.2001
Copyright © 2001, American Society for Microbiology. All rights reserved.