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Infection and Immunity, May 2001, p. 3159-3163, Vol. 69, No. 5
0019-9567/01/$04.00+0 DOI: 10.1128/IAI.69.5.3159-3163.2001
Copyright © 2001, American Society for Microbiology. All rights reserved.
Comparison of the Fibronectin-Binding Protein FNE from
Streptococcus equi Subspecies equi with FNZ
from S. equi Subspecies zooepidemicus Reveals
a Major and Conserved Difference
Hans
Lindmark,
Martin
Nilsson, and
Bengt
Guss*
Department of Microbiology, Swedish
University of Agricultural Sciences, S-750 07 Uppsala, Sweden
Received 7 November 2000/Returned for modification 12 December
2000/Accepted 9 February 2001
 |
ABSTRACT |
The gene fnz from Streptococcus equi
subspecies zooepidemicus encodes a cell surface protein
that binds fibronectin (Fn). Fifty tested isolates of S. equi subspecies equi all contain DNA sequences with
similarity to fnz. This work describes the cloning and
sequencing of a gene, designated fne, with similarity to
fnz from two S. equi subspecies
equi isolates. The DNA sequences were found to be identical
in the two strains, and sequence comparison of the fne and
fnz genes revealed only minor differences. However, one
base deletion was found in the middle of the fne gene and eight base pairs downstream of the altered reading frame there is a
stop codon. An Fn-binding protein was purified from the growth medium of a subspecies equi culture. Determination of
the NH2-terminal amino acid sequence and molecular
mass, as judged by sodium dodecyl sulfate-polyacrylamide gel
electrophoresis, revealed that the purified protein is the gene product
of the 5'-terminal half of fne. Fn-binding activity has
earlier only been found in the COOH-terminal half of FNZ. By the use of
a purified recombinant protein containing the NH2 half of
FNZ, we provide here evidence that this half of the protein also
harbors an Fn-binding domain.
 |
INTRODUCTION |
The specific role in the
pathogenesis of streptococcal fibronectin (Fn)-binding cell surface
proteins has not yet been elucidated, although it is assumed that these
proteins enhance the potential of the bacteria to cause disease. The
Fn-binding cell surface proteins SfbI/Protein F1 and M1, both from
Streptococcus pyogenes, mediate the adherence to and the
invasion of epithelial cells (4, 6, 12). Invasion of
epithelial cells is thought to enable the spreading of bacteria
into deeper tissues (8).
Streptococcus equi is usually divided into two subspecies,
called subspecies zooepidemicus and subspecies
equi. Subspecies zooepidemicus is part of the
normal bacterial flora in horses, where it acts as an opportunistic
pathogen that can cause disease in the upper respiratory tract, in the
uterus, in the umbilicus, and in wounds. Subspecies
zooepidemicus has also been isolated from a wide range of
other mammals including humans, in whom it occasionally can cause
severe disease (1). In contrast, subspecies equi is confined to horses, where it acts as an obligate
pathogen causing strangles, a contagious and worldwide disease of the
upper respiratory tract. Subspecies equi is thought to be a
clone derived from subspecies zooepidemicus, since the
former subspecies is genetically very homogeneous, whereas subspecies
zooepidemicus is genetically diverse (5, 7,
10).
Many isolates of subspecies zooepidemicus bind Fn
(10), and a gene, fnz, encoding a cell surface
protein that binds Fn, has been cloned and sequenced from subspecies
zooepidemicus strain ZV (9).
Whether subspecies equi expresses a functional FNZ protein
or not is unclear. Arguments for an intact FNZ protein in this subspecies include the following: (i) subspecies equi
contains DNA sequences homologous to fnz (10);
(ii) Northern blots have shown that an fnz-like transcript
in subspecies equi is in size and amount similar to the
fnz transcript in subspecies zooepidemicus ZV
(11); and (iii) the addition of FNZ protein inhibits the binding of Fn by subspecies equi (11).
Surprisingly, subspecies equi does not bind the
NH2-terminal 29-kDa fragment of Fn (3), which
is a domain bound both by cells of subspecies zooepidemicus ZV and by purified protein FNZ (10). Furthermore,
subspecies equi also binds considerably less native Fn than
subspecies zooepidemicus ZV (10). These
contradictory findings prompted us to clone and characterize the gene
corresponding to fnz from two subspecies equi strains.
 |
MATERIALS AND METHODS |
Bacterial strains, plasmids, and growth conditions.
The
streptococcal isolates used in this study are listed in Table
1. Plasmid pUC19 was used together with
Escherichia coli TG1 and XL1-Blue for cloning purposes.
Streptococcal strains were grown on blood agar plates or in Todd-Hewitt
broth (Oxoid, Basingstone, England) supplemented with 0.3% yeast
extract (THY). The E. coli strains were grown in
Luria-Bertani (LB) medium supplemented in appropriate cases with 50 µg ampicillin per ml or LA plates (LB medium supplemented with 1.5%
agar and 50 µg of ampicillin per ml). All incubations were at 37°C.
Isolation of clones with fnz-like inserts.
To
find useful restriction sites for cloning, Southern blots were
performed as earlier described (10), using radioactively labeled probes derived from fnz. Southern blot data revealed
that the restriction endonuclease SspI generates a 2.6-kb
fragment, containing the fnz-like gene.
SspI-digested chromosomal DNA from subspecies
equi Bd 3221 and Bd 995 were separated on 1% agarose gels,
and fragments of approximately 2.6 kb were cut out, purified, and
ligated into pUC19. Ligated material was electrotransformed into TG1
cells that were subsequently spread on LA plates and incubated
overnight. The following day, colonies were transferred to
nitrocellulose (NC) filters (Schleicher & Schuell, Dassel Germany) by
replica plating and, after 2 h of incubation of the filters on LA
plates, the colonies were lysed by chloroform vapor. After blocking the
filters with phosphate-buffered saline (PBS; 137 ml NaCl, 2.7 mM KCl,
10 mM, Na2HPO4, 1.4 mM
KH2PO4 [pH 7.4])-0.05% Tween 20 (PBS-T)
supplemented with casein (0.1 mg/ml), the filters were incubated
overnight with human Fn (Sigma, St. Louis, Mo.). The filters were
washed and subsequently incubated with a rabbit anti-Fn antibody
(diluted 1/1,000; Sigma) for 2 h. After being washed, the filters
were incubated for 1 h with a peroxidase-conjugated secondary goat
anti-rabbit antibody (diluted 1/1,000; Bio-Rad, Richmond, Calif.).
Reactive colonies were visualized by using 4-chloro-1-naphtol (Serva,
Heidelberg, Germany). Lysates from clones displaying Fn-binding
activity were subjected to sodium dodecyl sulfate-polyacrylamide gel
electrophoresis (SDS-PAGE), using the Phast system (Pharmacia Biotech,
Uppsala, Sweden), together with precast 8 to 25% gradient gels and SDS
buffer strips. The separated proteins were transferred to an NC filter
by diffusion at a temperature of 65°C. Fn-binding proteins were
detected as described above. Inserts of clones subjected to SDS-PAGE
were DNA sequenced using Thermo Sequenase dye terminator cycle
sequencing premix kit (Amersham, Cleveland, Ohio) and the ABI Model
377XL DNA sequencer. Computer programs from the PC GENE, DNA, and
protein sequence analysis software package (Intelligenetics, Inc.,
Mountain View, Calif.) were used to record and analyze the sequence data.
To confirm that the reading frame is changed in the fne gene
from subspecies equi a fragment was PCR amplified using the
primers Unna (5'-TAGAATTCTTGTGCTGGCA ACAAGC) and
Lages1 (5'-TATCTAGAACCGCCGCCGATCCC), together
with chromosomal DNA from the two subspecies equi strains and the subspecies zooepidemicus ZV strain. The underlined
nucleotides in the respective primers correspond to complementary
sequences in the fnz gene (9). The reaction
mixtures were subjected to agarose gel electrophoresis, and the major
band obtained from each sample was cut out, purified, and sequenced
using the primer Lages1.
Detection of secreted Fn-binding proteins.
After
centrifugation, supernatants from streptococcal overnight cultures (8 ml) were sterile filtrated. The proteins in the supernatants were
precipitated by adding 16 ml of acetone and, after centrifugation, the
pellets were dried and resuspended in 0.5 ml of distilled water
(dH2O). The samples were mixed with SDS loading buffer,
boiled, and subjected to a 4 to 15% gradient SDS-PAGE (Bio-Rad). After
separation, the proteins were electrophoretically transferred to an NC
filter (Amersham). Fn-binding proteins were detected as described
above. Molecular size markers (BioLabs, Beverly, Mass.) were included
on each gel.
Purification and amino acid sequencing of a Fn-binding protein
present in the supernatant of subspecies equi.
Subspecies equi Bd 3221 was grown overnight in 700 ml of
THY. After centrifugation and sterile filtration of the supernatant, the proteins in the supernatant were stepwise (50, 60, 70, 80, and
90%) precipitated with (NH4)2SO4
and resolved in dH2O. Fn-binding activity was only detected
in the 60% (NH4)2SO4 fraction. By
using a PD-10 column (Pharmacia Biotech) the buffer of the 60%
(NH4)2SO4 fraction was changed to
50 mM lactate (pH 4.0), a change that caused precipitation. After
separation of the precipitate, which displayed very low Fn-binding
activity, the sample was applied on an ion exchanger (Fractogel TSK
SP-650). Bound proteins were eluted with an NaCl gradient (0 to 1.5 M)
and collected in 11 fractions. One fraction was found to contain the
Fn-binding activity and, when separated on an SDS-PAGE gel, two equally
strong bands were displayed. After confirmation that these bands had
Fn-binding activity, they were transferred to a polyvinylidene
difluoride (PVDF) membrane, cut out, and subjected to
NH2-terminal amino acid sequencing.
Construction and purification of the NH2-terminal
half of FNZ.
Construction of a clone expressing the
NH2-terminal half of FNZ (amino acids 32 to 337 in Fig. 2)
was done by PCR amplification using forward primer OFNZ1
(5'-ACCATGGCTAGCGCAGAGCAGCTTTATTATGGGT), reverse
primer OFNZ2 (5'-ATACCCGGGATATCCTTCGGTACTACCATAGT),
and chromosomal DNA from subsp. zooepidemicus ZV as
the template. The underlined sequences correspond to complementary
sequences in the fnz gene. The obtained fragment was cleaved
with restriction endonucleases NheI and SmaI,
followed by ligation into the corresponding restriction endonuclease
sites in the expression vector pTYB2. This vector is part of an
E. coli expression system IMPACT T7 (NEB, Inc.). The ligated
DNA was electrotransformed into E. coli ER2566. Plasmids
harboring inserts were isolated from transformants and verified by DNA
sequencing. Production and purification of the fusion protein was done
by using one verified clone, pT2fnzN, and following the manufacturer's
instructions. Briefly, E. coli ER2566 harboring pT2fnzN was
lysed by freezing and thawing and, after sterile filtration, the lysate
was applied onto a chitin column. The column was extensively washed
with column buffer (20 mM Tris-HCl [pH 8.0], 500 mM NaCl, 0.1 mM
EDTA, and 0.1% Triton X100) and subsequently treated with cleavage
buffer (20 mM Tris-HCl [pH 8.0], 50 mM NaCl, 0.1 mM EDTA, and 30 mM
dithiothreitol). The reducing conditions in the cleavage buffer induce
an intein-mediated self-cleavage that releases the FNZ part from the
column while the intein-chitin part is still bound. The eluted product,
designated FNZN, was controlled on an SDS-PAGE gel.
Nucleotide sequence accession number.
The GenBank accession
number for the nucleotide sequence of fne in subspecies
equi is AF360373.
 |
RESULTS |
Cloning of a fnz related gene from two subspecies
equi strains.
Southern blots revealed that
SspI digestion of chromosomal DNA of subspecies
equi Bd 3221 and Bd 998 produces a 2.6-kb fragment hybridizing to the fnz probe. Several clones expressing
Fn-binding activity were isolated from partial libraries containing
SspI-digested chromosomal DNA from subspecies
equi strains Bd 3221 and Bd 995, respectively. Lysates from
two Fn-binding clones, designated p62FNE and p79FNE, from the
subspecies equi Bd 3221 and Bd 995 libraries, respectively,
were subjected to SDS-PAGE and after transfer to an NC filter, the
clones were tested for Fn-binding activity (Fig. 1). One clone, pSZF1000 (9),
harboring the complete fnz gene from subspecies
zooepidemicus ZV, expressed an Fn-binding protein with a
molecular mass of 66 kDa, while both p62FNE and p79FNE expressed
Fn-binding proteins with estimated molecular masses of 37, 32, and 31 kDa (Fig. 1).

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FIG. 1.
Western ligand blot analysis E. coli cells
harboring the fnz gene from subspecies
zooepidemicus ZV or fne from subspecies
equi Bd 3221 or Bd 995 were lysed by boiling in SDS sample
buffer. After separation by SDS-PAGE, the samples were transferred to
an NC filter and analyzed for Fn-binding activity. Lane 1, p62FNE; lane 2, p79FNE; lane 3, pSZF1000; lane 4, pUC19.
Molecular mass markers are indicated to the left in kilodaltons.
|
|
Sequencing of the complete genes, designated 62fne and
79fne, revealed no sequence difference between the two
genes. Comparison to fnz revealed 42 point mutations (Fig.
2). The point mutations were
predominantly found in the 3'-half of fne. This half of the gene was found to contain repetitive sequences similar to the repetitive R regions found in fnz (9). One
102-bp insert, encoding almost a complete repeat, was found in the
corresponding repetitive R region in fne (not shown). Of the
three deletions found, two were situated close to each other (positions
1203 to 1207 and 1212 to 1221), resulting in deletion of five and a
change of two amino acids in the deduced amino acid sequence.
Surprisingly, the third deletion consisted of one guanine base at
position 995, causing a frameshift, and eight base pairs downstream of
the deletion there is a TGA stop codon present that terminates
translation in the altered reading frame. A fragment covering the
one-base deletion was PCR amplified using chromosomal DNA from the two subspecies equi strains and subspecies
zooepidemicus ZV as a template. Sequencing of the three PCR
fragments confirmed that the guanine base is missing in the two
subspecies equi strains but not in subspecies
zooepidemicus ZV.

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FIG. 2.
fne gene from subspecies equi.
Nucleotides in boldface represent point mutations compared to the
fnz gene (9). The deletion of the guanine base
at position 995 causing the frameshift is represented by a vertical
arrow. The altered reading frame results in three different amino acids
(FED) in the COOH terminal end of FNE compared to the FNZ protein. The
signal peptide (S) and the start of the mature FNE protein are
indicated by horizontal arrows.
|
|
Subspecies equi but not subspecies
zooepidemicus secretes an Fn-binding protein.
Acetone
concentrated supernatants from overnight cultures of different
streptococcal species were tested for Fn-binding activity (Fig.
3A). The four subspecies equi
isolates used are all clinical isolates taken from horses suffering
from strangles, and the isolates also fall into different pulsotypes,
based on pulsed-field gel electrophoresis (12). An
Fn-binding protein with a molecular mass of approximately 32 kDa was
present in the supernatant from all four subspecies equi
isolates (lanes 1, 2, 3, and 14). Detection of Fn-binding activity
involved the use of an anti-Fn antibody and a peroxidase-labeled
secondary antibody. An identical Western ligand blot was made but with
the Fn excluded in order to determine whether the signals resulted from
Fn binding or were an effect of a direct binding between the bacterial
proteins and the antibodies (Fig. 3B). Comparison between the two
Western ligand blots revealed that the major signal for
Streptococcus equisimilis 172 (lane 4) and
Streptococcus dysgalactiae Epi9 (lane 11) is due to an immunoglobulin G (IgG)-binding effect. However, Fn-binding proteins were, besides subspecies equi, found for S. equisimilis 165 (lane 5), S. pyogenes AL-168 (lane 8),
S. dysgalactiae 8215 (lane 10), and S. dysgalactiae Epi9 (lane 11). No Fn-binding was seen for the two
subspecies zooepidemicus strains (lanes 12 and 13), and further investigation showed that supernatants from 10 out of 10 tested
subspecies zooepidemicus isolates, all containing an fnz-like gene (12), did not bind Fn or IgG in
the Western ligand blot assay (data not shown).

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FIG. 3.
Western ligand blots. (A) Concentrated supernatants from
overnight cultures of different streptococci were, after SDS-PAGE,
electroblotted over to an NC filter. The filter was blocked and
thereafter incubated with Fn, followed by an anti-Fn antibody, and
finally a horseradish peroxidase-labeled secondary antibody was added.
Lanes: 1, subspecies equi Bd 3221; 2, subspecies
equi Bd 998; 3, subspecies equi Bd 640; 4, S. equisimilis 172; 5, S. equisimilis 165; 6, S. pyogenes AW-43; 7, S. pyogenes 2-1047; 8, S. pyogenes AL-168; 9, S. dysgalactiae S2; 10, S. dysgalactiae 8215; 11, S. dysgalactiae Epi9;
12, subspecies zooepidemicus Bd 871; 13, subspecies
zooepidemicus KLM 778; 14, subspecies
equi KLM 723. (B) Same as in panel A, except that no Fn was
added to the filter.
|
|
The secreted Fn-binding protein in subspecies equi is
FNE.
The secreted Fn-binding protein from subspecies
equi Bd 3221 was purified from an overnight culture by using
(NH4)2SO4 precipitation and
ion-exchange chromatography. On an SDS-PAGE gel the purified protein
appeared as two major bands that were transferred to a PVDF membrane
and subjected to amino acid sequencing. The sequence obtained (EQLYY)
correlates to the sequence directly after the predicted signal-peptide
cleavage site of protein FNE (Fig. 2).
The NH2-terminal half of FNZ binds Fn.
The finding
that FNE binds Fn is contradictory to the earlier report that the
NH2-terminal half of FNZ does not bind Fn (9). To investigate this further a recombinant protein covering the NH2-terminal half of FNZ was produced, purified, and tested
for Fn-binding activity. As seen in Fig.
4 (lane 2), the NH2-terminal half of FNZ (FNZN protein) clearly has Fn-binding activity.

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FIG. 4.
(A) SDS-PAGE stained with Coomassie blue. Lane 1, cell
lysates of E. coli clone pSZF1000 (9); lane 2, purified FNZN protein from pT2fnzN; lane 3, cell lysates from E. coli clone p62FNE; lane 4, concentrated supernatant from growth
medium of an overnight culture of subspecies equi Bd 3221. Molecular mass markers are indicated in kilodaltons. (B) Western ligand
blot analysis. After SDS-PAGE, the proteins were transferred to an NC
filter and analyzed for Fn-binding activity. Lanes are as described in
panel A.
|
|
 |
DISCUSSION |
The earlier contradictory results, that subspecies equi
binds considerably less Fn than subspecies zooepidemicus,
although the size and amount of an fnz-like transcript is
similar between the two subspecies, have now been clarified. The
reading frame of fne is interrupted due to a one-base
deletion present in the middle of the gene and, as a consequence, only
the 5'-terminal half of fne is translated in subspecies
equi. We found that the FNE protein is secreted into the
growth medium, which is logically since it has a signal peptide (Fig.
2), but is lacking the COOH-terminally located sequence motifs involved
in cell wall anchoring found in the FNZ protein (9). The
finding that FNE binds to Fn was surprising since it was earlier
reported that the Fn-binding domains in FNZ all were located in the
COOH-terminal half of FNZ (9). However, this finding was
mainly based on analyzing a E. coli cell lysate containing a
plasmid construct (pSZF21) expressing the NH2-terminal half
of FNZ which did not bind Fn. In the present study we used the
corresponding DNA fragment from fnz to produce the
NH2-terminal half of FNZ (FNZN expressed by pT2fnzN) and, as shown in Fig. 4, lane 2, FNZN clearly binds Fn. The reason for the
lack of Fn-binding activity previously reported (9) is at
present unclear, but it might be due to several reasons, e.g., a low
level of expression of the fnz gene in the specific construct used.
To study the expression of secreted Fn-binding activity in subspecies
zooepidemicus, 10 isolates were chosen for their cell surface-located Fn-binding capacity ranging from low binders to high
binders. The reason why some subspecies zooepidemicus
strains display low Fn-binding activity although they harbor an
fnz-like gene is not because of a one-base deletion as in
fne, since no Fn-binding activity was found in any of the
growth media from overnight cultures of subspecies
zooepidemicus. Several streptococcus isolates other than the
four subspecies equi strains were found to secrete
Fn-binding proteins. Whether these are cell surface-attached proteins that have been released during the cultivation or were actively secreted into the growth medium is not clear. Interestingly, the supernatant from a culture of subspecies zooepidemicus
KLM 778 (lane 13 in Fig. 3A) displayed no Fn-binding activity,
although cells from this strain have been shown to have high
Fn-binding capacity (10).
In S. pyogenes, large biologically active fragments of cell
surface proteins are released by a serine protease called SCP (2). One of the released fragments binds IgG and has been
found to originate from protein H, an IgG-binding cell surface protein (2). Cells of S. dysgalactiae Epi9 bind
IgG-efficiently (J. Vasi, personal communication), so whether the two
IgG-binding proteins found in the supernatant of S. dysgalactiae Epi9 and S. equisimilis 172, respectively,
are parts from cell surface proteins or directly secreted into the
growth medium is not yet known.
It has been proposed that subspecies equi is a clone derived
from subspecies zooepidemicus (7) and that
certain evolutionary changes turned it from a commensal to a pathogen
(13). The acquisition of SeM, an M-like protein present in
subspecies equi but not in subspecies
zooepidemicus, has been postulated to be one of these key
elements (13). The finding that the 4 tested subspecies equi isolates secreted an Fn-binding protein whereas the 10 tested subspecies zooepidemicus isolates did not also
reflects a distinct difference between the two subspecies. Thus, there
is a possibility that the deletion of one base in fnz has
also contributed to change a commensal to a pathogen.
 |
ACKNOWLEDGMENTS |
We thank Martin Lindberg for advice and critical comments.
This study was supported by grants from the Swedish Council for
Forestry and Agricultural Research (32.0370/96 and 32.0646/97) and the
Swedish Horserace Totalizator Board (ATG).
 |
FOOTNOTES |
*
Corresponding author. Mailing address: Department of
Microbiology, Swedish University of Agricultural Sciences, Box 7025, S-750 07 Uppsala, Sweden. Phone: 46-18-673205. Fax: 46-18-673392. E-mail: bengt.guss{at}mikrob.slu.se.
Editor:
T. R. Kozel
 |
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Infection and Immunity, May 2001, p. 3159-3163, Vol. 69, No. 5
0019-9567/01/$04.00+0 DOI: 10.1128/IAI.69.5.3159-3163.2001
Copyright © 2001, American Society for Microbiology. All rights reserved.
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