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Infection and Immunity, October 2002, p. 5770-5778, Vol. 70, No. 10
0019-9567/02/$04.00+0 DOI: 10.1128/IAI.70.10.5770-5778.2002
Copyright © 2002, American Society for Microbiology. All Rights Reserved.
Department of Biological Sciences, Centre for Molecular Microbiology and Infection, Imperial College of Science, Technology and Medicine, London SW7 2AY,1 Developmental Biology Unit, Institute of Child Health, London WC1 1EH,2 Centre for Paediatric Gastroenterology, Royal Free Hospital, London NW3 2QG, United Kingdom3
Received 21 February 2002/ Returned for modification 9 May 2002/ Accepted 3 July 2002
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As with other enterotoxigenic pathogens, delivery of toxins follows C. difficile colonization of the gut, which requires bacterial adherence to the mucosa. In a Syrian hamster model of clindamycin-induced disease, a correlation was reported between variable efficiencies of gut colonization by different C. difficile strains and their abilities to associate with regions of the gastrointestinal tract spanning from the jejunum to the colon (2). At least part of the variation was suggested to be due to factors other than toxin production. However, the adherence of a poorly virulent strain to the small bowel mucosa was increased by the administration of a crude toxin preparation, possibly due to the unmasking of receptor sites following cell damage.
While no direct microscopic evidence of the adherence of C. difficile to the gastrointestinal mucosa has so far been produced, the phenomenon has been studied in greater detail in vitro. Binding to enterocyte-like Caco-2 cells and mucus-secreting HT29-MTX cells was reported to be increased substantially when the bacterial cells were grown in blood-containing medium and heat shocked at 60°C (11). This correlated with increased amounts of two polypeptides of 12 and 27 kDa on the bacteria. More recently, a seemingly unrelated 66-kDa protein (Cwp66) has been identified as mediating adhesion of C. difficile to Vero cells in culture (36). Both N- and C-terminal fragments of this protein, or their cognate antibodies, inhibited binding. Inhibition, however, was only partial and, surprisingly, showed an inverse correlation with the amount of blocking agent. Moreover, binding was only observed with heat-shocked bacteria, leaving open the question of the nature of the adhesins active at physiological temperatures.
Taken together, these results suggest the existence of multiple adhesins on C. difficile. In order to identify and dissect the roles of individual components, studies with whole cells have obvious limitations, since it is likely that no single factor is absolutely required for adhesion. With the sequence of the whole C. difficile genome now approaching completion, a number of novel polypeptides have been identified which may be candidates for an adhesin function. The Cwp66 protein is one of a large family of gene products encoded by the C. difficile genome with significant homology to the highly expressed surface layer proteins (SLPs), encoded by the slpA gene (4, 15). The cwp66 gene is part of a densely arranged cluster of 12 open reading frames encoding proteins related to SlpA and maps approximately 6 kb 3' of slpA in the same transcriptional orientation. As in several other bacteria, the SLPs are the predominant surface proteins in C. difficile. However, in contrast to most other species, where the paracrystalline S-layer is composed of one protein species, the S-layer of C. difficile consists of two subunits which show interstrain variability (5, 16, 32). Both the high- and low-MW subunits are encoded by slpA and are produced from the posttranslational cleavage of a common precursor. The high-MW SLP is related both in sequence and function to amidases encoded by the cwlB and cwbA genes from Bacillus subtilis (4). Based on their localization at the outer bacterial surface, and on their abundance, it has been speculated that the SLPs may be involved in pathogen-host interactions critical to pathogenesis (27). Chemical removal of the SLPs or the presence of anti-SLP Fab fragments was shown to abolish adherence of C. difficile to human HeLa or mouse 929 cells (32a).
In the present study, we have investigated the direct binding of C. difficile SLPs to gastrointestinal tissues by both microscopic and biochemical approaches, and we present evidence that the high-MW SLP may play a role in the binding of C. difficile to host cells.
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Preparation of native and recombinant SLPs. SLPs were extracted from C. difficile by treatment with 0.2 M glycine, pH 2.2, as previously described (4). For the production of recombinant SlpA precursor, the entire slpA coding sequence (CDS) was amplified by PCR from clone pCd1e4 (generated from strain 630 by the genome-sequencing project at the Sanger Centre) using primers NF163 and NF164 (Table 1). This introduced an NcoI site spanning the ATG and an XhoI site immediately 3' of the codon for the last amino acid (Met). Amplification was carried out by Pfu polymerase, and after NcoI plus XhoI digestion, the PCR product was ligated into pET28a (Novagen, Madison, Wis.) to form pET-1e4. For expression in L. lactis, the insert in pET-1e4 was released by digestion with XbaI and Bsp1286I, blunt cloned into the EcoRV site of M13tg131 (17) to provide suitable flanking restriction sites, and recloned between the BamHI and EcoRI sites of pNZ8020 to give pNZ-1e4. A double-stranded oligonucleotide (resulting from the annealing of oligonucleotides NF238 and NF239 and encoding a hexahistidine stretch) was then inserted between the unique PvuI site (newly created in the M13tg131 clone from the ligation of the blunted Bsp1286I half site to the EcoRV half site) and the unique XhoI site at the 3' end of pNZ-1e4 to give pNZ-1e4H.
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TABLE 1. Oligonucleotides used in the present study
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For expression in L. lactis harboring pNZ-1e4H, an exponentially growing culture in M17 medium (Merck) supplemented with 0.5% glucose at 30°C was induced with nisin (a gift from Microscience, Wokingham, United Kingdom) for 0.5 h at an optical density at 600 nm of
0.5. For expression in E. coli BL21(DE3) harboring pET28a constructs, cells were grown at 37°C in Luria-Bertani broth to an optical density at 550 nm of
0.5, induced by the addition of IPTG (isopropyl-ß-D-thiogalactopyranoside) to 1 mM, and harvested after a further 3 h. The induced cells were washed once in H2O and resuspended in 10% sucrose-20 mM Tris, pH 8. After being frozen and thawed, the L. lactis cells were lysed with lysozyme (to 20 mg/ml; 10 min at room temperature) and urea (to 6 M), whereas the E. coli cells were lysed with lysozyme (to 1 mg/ml; 10 min at room temperature) followed by sonication on ice (four bursts of 30 s each at maximum power) using a Heat Systems Ultrasonic Processor XL2020 sonicator equipped with a 2-mm-wide probe. They were then subjected to ultracentrifugation at 100,000 x g for 40 min at 4°C.
Affinity chromatography was carried out on Ni-nitrilotriacetic acid (NTA) agarose (Qiagen). Bacterial lysates were brought to 0.5 M in NaCl and 5 mM in imidazole prior to being applied to the column. Bound material was washed with 500 mM NaCl-20 mM Tris (pH 8)-10 mM imidazole and eluted in 20 mM Tris (pH 8)-250 mM imidazole.
The recombinant HC domain from tetanus neurotoxin (TeNT) used as a negative control for binding was prepared and purified as previously described (31).
Anti-SLP antisera.
Four 8-week-old New Zealand White rabbits were each injected subcutaneously with 50 µg of Ni-NTA-purified recombinant high-MW or low-MW subunit in Freund's complete adjuvant (two rabbits per subunit). The rabbits were boosted after 3, 5, 7, and 11 weeks, using the same amount of antigen but in incomplete Freund's adjuvant. For the experiments described in this paper, sera collected after the third boost were used, with an estimated titer in enzyme-linked immunosorbent assays (ELISAs) against the immunogen of
1:100,000. Mouse antisera against SLPs from C. difficile strains 1, 17, and 630 were previously described (4).
HEp-2 cell binding.
HEp-2 cells were maintained in Dulbecco's modified Eagle's medium-10% fetal bovine serum. For binding experiments, cells were seeded in 96-well plates and grown to confluence. After they were blocked with 3% bovine serum albumin (BSA) in phosphate-buffered saline (PBS), SLPs or a control protein (recombinant HC domain from TeNT) was added at
1 µg/ml in PBS and incubated for 1 h at room temperature. Bound proteins were detected by the sequential addition of anti-SLPs (1:500 for mouse antisera and 1:5,000 for rabbit antisera) and horseradish peroxidase (HRP)-coupled anti-immunoglobulin (Ig) (1:2,000; Dako). For immune depletions, antisera were preabsorbed (in batch mode) onto Ni-NTA agarose coated with excess recombinant SLP.
Fluorochrome labeling of C. difficile cells and binding to HEp-2 cells were essentially as described previously (10), except that they were carried out for 1 h at room temperature instead of 37°C, and the HEp-2 cells were detached by scraping rather than by trypsinization. For blocking experiments, anti-high-MW SLP antisera, or a mixture of antisera and either acid-extracted SLPs or recombinant high-MW SLP, were preincubated with labeled bacteria for 1 h at room temperature. The bacteria were then washed once in PBS prior to their addition to HEp-2 cells.
Immunohistochemistry.
Paraffin sections (5 µm thick) of mucosal biopsy specimens of human gastrointestinal tract (stomach, proximal small intestine, and colon) were obtained from patients (age range, 3 to 16 years) who had undergone routine endoscopic examination for gastrointestinal complaints after a full diagnostic evaluation with fully informed consent and ethical approval. All were classified as histologically normal. Mouse organ samples (obtained under experimentation by license from the United Kingdom government Home Office) were removed immediately following sacrifice and fixed in buffered formalin prior to being embedded in paraffin and sectioned at 4 to 6 µm. The sections were deparaffinized, rehydrated, treated with 3% H2O2 in methanol for 10 min, and blocked in 10% horse serum in PBS (blocking solution) for 30 min. SLPs or a control protein (recombinant HC domain from TeNT) was added at
10 µg/ml in blocking solution and incubated for 1 h at room temperature. Anti-SLP antisera (described above) were added at 1:2,000, followed by HRP-conjugated anti-Ig (Dako) at 1:100 in blocking solution. The antisera were incubated for 30 min at room temperature. The results were visualized with diaminobenzidine (Sigma). The sections were lightly counterstained with Meyer's hematoxylin.
Western blotting and dot blot analysis.
Tissue extracts were prepared by homogenizing fresh organs in 10 volumes of 10% sodium dodecyl sulfate (SDS)-10 mM EDTA-25 mM Tris-Cl (pH 6.8), using an Ultra-Turrax homogenizer (IKA). Approximately 100 µg of total protein was fractionated by SDS-polyacrylamide gel electrophoresis (PAGE) on 10% gels and electroblotted onto a nitrocellulose membrane (Bio-Rad) in 10 mM 3-[cyclohexylamino]-1-propanesulfonic acid buffer-10% methanol, pH 11, for 1 h at 70 V and 4°C. Purified extracellular matrix (ECM) components (Sigma) were spotted in duplicate onto the same membrane (20 ng/spot). The membranes were blocked with 10% nonfat dry milk in PBS. SLPs or a control protein (recombinant HC domain from TeNT) was added at
0.25 µg/ml in 3% BSA-0.5% Tween-20-0.5% TX-100 in PBS and incubated for 1 h at room temperature. Anti-SLP antisera were used at a 1:50,000 dilution in 3% BSA-0.5% Tween-20-0.5% TX-100 in PBS and incubated for 1 h at room temperature. For blocking experiments, the antisera were preincubated with a 20-fold excess of soluble, purified, recombinant high-MW subunit. Following incubation with an HRP-conjugated goat anti-rabbit Ig (Dako; 1:2,000 dilution), the blots were developed by enhanced chemiluminescence (Amersham) in accordance with the manufacturer's instructions.
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To overcome this problem, we turned to an expression system based on L. lactis (18). The slpA CDS was recloned into vector pNZ8020 to give pNZ-1e4. A double-stranded oligonucleotide, encoding a hexahistidine stretch, was inserted in frame immediately 3' of the slpA sequence in order to give a C-terminal fusion (pNZ-1e4H). The resulting plasmid was transformed into L. lactis strain NZ9000. On SDS-PAGE analysis, a decrease in total cellular protein per unit volume of culture was apparent in the strain harboring pNZ-1e4H at 1 h postinduction, reflecting a growth-inhibitory or lytic effect similar to, albeit less pronounced than, that seen in E. coli. L. lactis(pNZ-1e4H) was therefore induced for 0.5 h, and lysates were purified over Ni-NTA agarose. This yielded substantial amounts of a major band (>95% pure) corresponding to the size of the SlpA precursor (Fig. 1).
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FIG. 1. SDS-PAGE analysis of native SLPs extracted from C. difficile strains 1, 17, and 630; recombinant SlpA precursor expressed in L. lactis (pNZ-1e4H); and recombinant high- and low-MW subunits expressed in E. coli (pET28-High and pET28-Low). The last three samples were purified on Ni-NTA agarose. Molecular mass standards in kilodaltons are indicated on the left.
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Binding of native and recombinant C. difficile SLPs to tissue culture cells. SLP binding experiments were initially performed on live cells in culture. HEp-2 cells were chosen, since although they were not of gastrointestinal origin, adherence of enterobacterial pathogens to these cells had been reported (21). As shown in Fig. 2A, acid-extracted SLPs from strains 1, 17, and 630 all showed binding to cells significantly higher than that found for a control protein (the HC domain from TeNT [31]), indicating that binding of SLPs is independent of the source strain. Further analysis of purified recombinant subunits revealed stronger binding for the high-MW SLP, although the low-MW SLP also scored positive (Fig. 2B). Anti-subunit antisera proved to be monospecific, as shown by the absence of reactivity on the heterologous subunit. Moreover, binding was abolished by removing anti-subunit activity from each antiserum by preadsorption on Ni-NTA-bound antigen.
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FIG. 2. Binding of C. difficile SLPs to cultured HEp-2 cells. (A) Binding of native SLPs from strains 630, 1, and 17 as detected by ELISA using mouse antisera raised against strain-specific SLPs. The HC domain from TeNT, followed by anti-SLP630, was used as a negative control. (B) Binding of purified recombinant high- and low-MW subunits detected by ELISA using subunit-specific rabbit antisera. Antiserum specificity is shown by the lack of reactivity on the heterologous subunit, as well as following preadsorption on immobilized homologous antigen. The bars (with standard deviations) represent the ratios of values obtained with the indicated protein to those with BSA. (C) FACS profiles of HEp-2 cells bound to fluorochrome-labeled C. difficile preincubated with rabbit preimmune serum (rightmost black line), to fluorochrome-labeled C. difficile preincubated with rabbit antiserum raised against the purified high-MW SLP (red line), or to fluorochrome-labeled C. difficile in the presence of a fivefold excess of unlabeled bacteria (green line). The leftmost black line corresponds to the profile of unlabeled HEp-2 cells. Depl., depleted.
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20 to 30% decrease in cell binding relative to preimmune serum, based on the intensity of HEp-2-bound fluorescence. In parallel experiments, a fivefold excess of unlabeled bacteria resulted in 60 to 65% inhibition (Fig. 2C). Preincubation of the antiserum with the recombinant high-MW subunit completely abolished the blocking effect (data not shown). Thus, the high-MW SLP subunit is involved in binding of C. difficile to human epithelial cells. Binding of native and recombinant C. difficile SLPs to gut tissue sections. Direct binding of purified SLPs to human gastrointestinal tissues was investigated on histologically normal sections of mucosal biopsy specimens. SLP binding was revealed by subsequent incubation with antisera raised against the SLP complex or individual subunits, followed by HRP-conjugated secondary antiserum. Initial experiments tested the binding of either native SLPs, purified from C. difficile strain 630 by extraction at low pH, or purified recombinant SLPs expressed in L. lactis as an uncleaved precursor. Strong, specific binding was found both to the epithelium and the lamina propria of the mucosa at all levels of the gastrointestinal tract (Fig. 3). Anti-SLP antisera did not show any reactivity on sections preincubated with a control protein (recombinant HC domain from TeNT) (Fig. 3A, D, and G, 4, and 5A)
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FIG. 3. Low-power views of representative sections from biopsy specimens of human stomach, duodenum, and colon incubated with the HC domain from TeNT as a negative control, with native SLPs extracted from strain 630 (SLP-630), or with purified recombinant SlpA precursor (pNZ-1e4H). Positive binding is indicated by the brown color following immune detection with anti-SLP antiserum and HRP-coupled anti-Ig.
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These studies were confirmed and extended with mouse tissues (Fig. 4). Examination of cross sections of the colon spanning the whole intestinal wall showed, in addition to staining of the surface epithelium and, more weakly, of the lamina propria, a distinct positivity of the serosa. Thus, binding of C. difficile SLPs to gastrointestinal tissues is conserved in the mouse, a species that is susceptible to C. difficile-induced disease, albeit to a more limited extent than the hamster (23).
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FIG. 4. Low (x10)- and high (x20)-power views of representative sections from mouse colon incubated with the HC domain from TeNT as a negative control, with native SLPs from strain 630 (SLP-630), or with purified recombinant SlpA precursor (pNZ-1e4H). Positive binding is indicated by the brown color following immune detection with anti-SLP antiserum and HRP-coupled anti-Ig.
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FIG. 5. High-power (x20) views of representative sections from a biopsy of human colon, incubated with the HC domain from TeNT as a negative control, with native SLPs from strain 630 (SLP-630), and with purified recombinant low-MW SLP (pET-Low) or high-MW SLP (pET-High). Positive binding is indicated by the brown color following immune detection with antisera specific for native SLPs (TeNT and 630) or individual subunits and HRP-coupled anti-Ig.
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63 and 81 kDa are visible with both the high-MW SLP and the control protein. However, two species show specific binding to the high-MW SLP: a band at
97 kDa is present in all four organs, whereas one at
107 kDa is specific to the small and large intestine. Competition experiments with excess soluble SLP confirmed the specificities of both bands (Fig. 6C).
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FIG. 6. Western blotting analysis of SLP ligands in mouse tissues. Extracts from the indicated tissues were fractionated by SDS-PAGE, blotted onto nitrocellulose, and probed with the HC domain from TeNT as a negative control (left) or with purified recombinant high-MW SLP (H) (middle and right). Bound protein was detected with anti-high-MW subunit ( -H). In the case of the right-hand panel, this had been preincubated with soluble purified recombinant high-MW SLP as a specificity control. The two arrowheads at the right of the middle panel point to an 97- and an 107-kDa species which bind the high-MW SLP specifically. Molecular mass standards in kilodaltons are indicated on the left.
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FIG. 7. Binding of C. difficile SLPs to immobilized ECM components. Aliquots ( 20 ng) of the indicated proteins were spotted in duplicate onto a nitrocellulose membrane, which was then probed with the HC domain from TeNT as a negative control, with native SLP from strain 630, or with purified recombinant high-MW (pET-High) or low-MW (pET-Low) subunit. The blots were developed with antisera specific for native SLPs (TeNT and 630) or individual subunits, followed by HRP-coupled anti-Ig and enhanced chemiluminescence.
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In a previous study, only partial inhibition of adherence was also reported with antibodies against a distinct but related cell surface component of C. difficile, the SlpA-like ORF3/Cwp66 (36). As is the case with many bacterial pathogens, adhesion of C. difficile to host cells is probably multifactorial, involving several distinct bacterial proteins and possibly other macromolecules.
The C. difficile SLPs bind to different components of gastrointestinal tissues, at both the morphological and biochemical levels. Morphologically, SLP binding occurs both to epithelial and connective tissue. In the intestinal epithelium, positive cells correspond to enterocytes, while goblet cells are negative. Thus, although an association of whole C. difficile cells to mucus-secreting HT29-MTX cells has been reported (11), it is unlikely that the SLP ligand is a mucus constituent. Based on the concentration of epithelial staining along the luminal border, it seems more likely that it corresponds to a component of the brush border. Binding shows an intriguing correlation with the architectural organization and hence the differentiation state of the intestinal epithelium. Thus, it is largely restricted to cells lining the main digestive cavity and is highest at the apexes of villi, which correspond to the most differentiated enterocytes. In contrast, glands and crypts, which represent the proliferative compartment, are negative. The staining obtained on the gastrointestinal connective tissue indicates binding to the ECM rather than to cells. Both a diffuse and a fibrillar pattern are observed, suggestive of binding to multiple components.
The immunohistochemistry data are supported and extended by the results of biochemical analysis. On Western blotting, the SLPs were found to bind specifically to two major polypeptides, one of which may be specific to the intestine. The nature and the precise cellular origin of these polypeptides remain to be established. Candidate ECM ligands were investigated after immobilization on a membrane. A clear signal was obtained with collagen I, thrombospondin, and vitronectin, but not with collagen IV, fibronectin, or laminin. The last results indicate that the SLPs do not bind to the basement membrane of the epithelium, consistent with the immunohistochemistry data. They also suggest that binding is mediated by specific structural domains rather than by nonspecific interactions. We cannot exclude binding to additional ECM components, such as the glycosaminoglycans that are the main constituents of the connective tissue ground substance. Binding of whole C. difficile cells has recently been reported for fibrinogen, vitronectin, fibronectin, and collagen types I, III, IV, and V but not for laminin (5a).
SLP binding to tissues or ECM molecules is mediated almost exclusively by the high-MW subunit. The sequence of this subunit is well conserved among strains, suggesting that binding is not strain dependent. This is supported by the ELISA data on HEp-2 cells using acid-extracted SLPs from three independent strains. While binding of soluble SLPs is sufficiently strong to be easily detected under the stringent conditions used in our histochemical and biochemical assays, even higher affinity is likely to exist for polymeric SLPs, such as that found within the bacterial S-layer. In contrast, the low-MW SLP does not bind to the mucosal connective tissue or to purified ECM components. Binding is observed, however, to rare gastrointestinal epithelial cells in a weak, punctate pattern, as is binding to HEp-2 cells in ELISA, although the latter are not derived from the gastrointestinal epithelium. Thus, the SLPs may be a multifunctional adhesin.
The role of SLP binding to tissue components in C. difficile-associated disease remains to be investigated. In several bacteria, surface molecules have evolved to interact with animal cells. Thus, in the case of Listeria monocytogenes, InlA and InlB binding to E-cadherins on enterocytes (8) and to gC1q-R and Met, respectively, on other epithelial cell types (3, 30), is required for internalization. Similarly, in Yersinia species, invasin binding to ß1 integrins promotes entry into intestinal M cells (14). In both cases, the cellular ligands are adhesion molecules, the engagement of which activates intracellular signaling pathways and leads to rearrangements of the actin cytoskeleton. There is no evidence that C. difficile can gain entry into nonphagocytic cells. However, disruption of the actin cytoskeleton is among the most notable effects of the C. difficile toxins (25, 37). The resulting damage to the intestinal surface epithelium allows the bacteria access to the underlying mucosal connective tissue. A number of studies have shown bacterial binding to ECM components and documented its role in infection. Thus, S. aureus binding to fibronectin via FnBP-A (fibronectin binding protein) or to collagen via CNBP (collagen binding protein) has been shown to play a role in animal models of infection (20, 22, 24, 26). In Yersinia species, mutations of the YadA surface protein causing loss of collagen binding resulted in a loss of virulence in mice (33). Binding of SLPs to ECM components is not unique to pathogenic bacteria but may also have a role in gut colonization by the normal resident flora (35).
We propose that SLP-mediated binding may play a role in at least two separate stages. First, it could mediate binding of C. difficile to brush border components and therefore allow targeted delivery of toxins to enterocytes. This may be essential in order to avoid dilution of the toxins or their degradation by digestive proteolytic enzymes (7). At a later stage, following toxin-induced epithelial damage, SLP binding to ECM components is likely to contribute significantly to further tissue damage. In the intestinal mucosa, collagen I plays a major structural role, whereas thrombospondin mediates the assembly of multiprotein complexes that can modulate cell adhesion or signaling (6, 19) and vitronectin plays a key regulatory role in the integrity of the ECM (28). SLP binding may lead to the disruption of these crucial interactions. In addition, binding to tissue components may contribute to pathogenesis by masking potential antigenic determinants and allowing the bacteria to escape from the immune response. A thorough testing of this hypothesis will require the development of C. difficile slpA mutants and an analysis of their pathogenicities in an experimental animal model.
E.C. was supported by a fellowship from the Blanceflor Boncompagni Ludovisi Foundation, Stockholm, Sweden.
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