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Infection and Immunity, October 2002, p. 5816-5821, Vol. 70, No. 10
0019-9567/02/$04.00+0 DOI: 10.1128/IAI.70.10.5816-5821.2002
Copyright © 2002, American Society for Microbiology. All Rights Reserved.
Coxiella burnetii Localizes in a Rab7-Labeled Compartment with Autophagic Characteristics
Walter Berón,1* Maximiliano G. Gutierrez,1 Michel Rabinovitch,2 and Maria I. Colombo1*
Instituto de Histología y Embriología, Facultad de Ciencias Médicas, Universidad Nacional de Cuyo-CONICET, Mendoza 5500, Argentina,1
Departamento de Microbiologia, Imunologia e Parasitologia, Escola Paulista de Medicina, UNIFESP Sao Paulo, Sao Paulo, Brazil2
Received 29 March 2002/
Returned for modification 17 May 2002/
Accepted 17 June 2002

ABSTRACT
The obligate intracellular bacterium
Coxiella burnetii, the
agent of Q fever in humans and of coxiellosis in other animals,
survives and replicates within large, acidified, phagolysosome-like
vacuoles known to fuse homo- and heterotypically with other
vesicles. To further characterize these vacuoles, HeLa cells
were infected with
C. burnetii phase II; 48 h later, bacteria
-containing
vacuoles were labeled by LysoTracker, a marker of acidic compartments,
and accumulated monodansylcadaverine and displayed protein LC3,
both markers of autophagic vacuoles. Furthermore, 3-methyladenine
and wortmannin, agents known to inhibit early stages in the
autophagic process, each blocked
Coxiella vacuole formation.
These autophagosomal features suggest that
Coxiella vacuoles
interact with the autophagic pathway. The localization and role
of wild-type and mutated Rab5 and Rab7, markers of early and
late endosomes, respectively, were also examined to determine
the role of these small GTPases in the trafficking of
C. burnetii phase II. Green fluorescent protein (GFP)-Rab5 and GFP-Rab7
constructs were overexpressed and visualized by fluorescence
microscopy.
Coxiella-containing large vacuoles were labeled
with wild-type Rab7 (Rab7wt) and with GTPase-deficient mutant
Rab7Q67L, whereas no colocalization was observed with the dominant-negative
mutant Rab7T22N. The vacuoles were also decorated by GFP-Rab5Q79L
but not by GFP-Rab5wt. These results suggest that Rab7 participates
in the biogenesis of the parasitophorous vacuoles.

INTRODUCTION
Phagocytosis is responsible for the internalization of microorganisms,
damaged cells, and inert particles (
1,
29). After internalization,
the particles become sequestered in membrane-bound organelles,
called phagosomes, which undergo a process of maturation that
involves acidification and several fusion events. At early time
points after phagocytosis, phagosomes acquire markers of early
endosomes such as Rab5 and mannose receptors (
1,
4,
15). Subsequently,
phagosomes gradually lose these markers and acquire late endosomal
markers such as mannose-6-phosphate receptors, Rab7, lysosome-associated
membrane glycoproteins (LAMPs), and cathepsin D (
1,
4,
15).
Finally, phagosomes fuse with secondary lysosomes, acquiring
higher concentrations of hydrolytic enzymes and LAMPs and a
lower pH (
14).
Because many microbes are killed and degraded in the phagosomal compartment, the phagocytic pathway is an important component of host defense against microorganisms. However, some intracellular pathogens inhabit vacuoles that interact with compartments of the biosynthetic pathway, while others escape from the phagosomes or remain in vacuoles which neither acidify nor fuse with lysosomes (for a review see reference 31). In contrast, Coxiella burnetii bacteria live and replicate in acidified compartments with phagolysosomal characteristics (23). Lysosomal membrane markers and enzymes, as well as molecules internalized by fluid phase endocytosis, are easily found in vacuoles containing C. burnetii (23), and. the vacuoles also fuse with other components of the phagocytic/endocytic system (20, 42, 43). The acid environment appears to be essential for C. burnetii replication since raising the lysosomal pH with lysosomotropic amines or proton pump V-ATPase inhibitors reduces the growth of C. burnetii (22, 24).
Lysosomes represent the hydrolytic compartment not only for extracellular substrates (e.g., microorganisms) but also for turnover of cellular components including organelles. Autophagy is probably the main mechanism for degradation of long-lived proteins and the only mechanism for turnover of organelles including mitochondria and peroxisomes (41). Cytoplasmic portions and organelles are sequestered in a membranous structure (i.e., autophagosome) that interacts with the endocytic pathway and finally fuses with the lysosomes, where the incorporated materials are degraded (17, 18). Recently, it has been shown that some intracellular parasites avoid interactions with the endocytic pathway and replicate rapidly in vacuoles with autophagosome features (11, 35, 46).
Rab GTPases belong to the Ras superfamily of small GTPases and play crucial roles in membrane trafficking of eukaryotic cells, regulating tethering, docking, and fusion events among different compartments (48). Rab proteins localized in different intracellular compartments modulate specific vesicular-transport events (48). Rab5, a member of the Rab family, localizes on early endosomes and newly formed phagosomes (14-16), regulating membrane trafficking events in both the endocytic and phagocytic pathways (2, 3, 7, 44). Rab7, in turn, controls transport and fusion among degradative endocytic compartments such as late endosomes and lysosomes (19, 45). Rab7 appears to be a key component for the maintenance of the perinuclear lysosomal compartment by controlling the aggregation and fusion of late endosomes and lysosomes (8). Interestingly, some pathogens reside in phagosomes that exclude Rab7 from their membranes (13, 39, 44) whereas others reside in phagosomes that recruit this protein (10, 30). Nevertheless, both kinds of phagosomes are arrested in their maturation.
Given the diversity of the intracellular compartments targeted and customized by microorganisms, it is likely that modulation of the endocytic and phagocytic pathways allows pathogens to survive and to multiply in their host cells. There is indeed evidence that parasites can disrupt the maturation of the phagosomal pathway by interference with the distribution and function of the Rab protein (2, 3, 10, 13, 30, 39, 44).
Although C. burnetii multiplies in vacuoles with lysosomal features, the molecular mechanisms by which the bacterium controls the biogenesis of the replicative vacuoles are largely unknown. In the present study we further characterized C. burnetii parasitophorous vacuoles. In HeLa cells infected with C. burnetii phase II for 48 h, vacuoles containing these intracellular parasites and labeled with LysoTracker, a marker of acidic compartments, were found to accumulate monodansylcadaverine (MDC) and the LC3 protein, both specific markers of autophagic vacuoles (5, 26, 32). Also, 3-methyladenine (3-MA), an inhibitor of autophagy (40), blocked the development of Coxiella-containing vacuoles. These results suggest that parasitophorous vacuoles interact with the autophagic pathway. Furthermore, we show that vacuoles harboring C. burnetii are heavily labeled with Rab7 and with the GTPase-deficient Rab5 mutant. Interestingly furthermore, overexpression of the dominant-negative Rab7 mutant altered the formation of the replicative vacuole. These results suggest that Rab7 likely participates in the biogenesis of the C. burnetii-containing vacuoles.

MATERIALS AND METHODS
Materials.
Minimal essential medium (

-MEM) and fetal bovine serum (FBS)
were obtained from Gibco Laboratories (Grand Island, N.Y.).
Rhodamine 6G and LysoTracker were from Molecular Probes (Eugene,
Oreg.). All other chemicals were from Sigma Chemical Co. (St.
Louis, Mo.). Recombinant Sindbis viruses expressing green fluorescent
protein (GFP)-tagged Rab5, Rab7, and their mutants were kindly
provided by Philip D. Stahl (Washington University, St. Louis,
Mo.). Plasmids encoding enhanced GFP (EGFP)-Rab7 and its mutants
were kindly provided by Bo van Deurs (University of Copenhagen,
Copenhagen, Denmark).
Cell cultures.
HeLa cells were grown in T25 flasks at 37°C in a 5% CO2 atmosphere in
-MEM supplemented with 10% FBS, 2.2 g of sodium bicarbonate/liter, 2 mM glutamine, and 0.1% penicillin-streptomycin. Stably transfected CHO cells overexpressing the EGFP-LC3 protein (33) were grown in T25 flasks at 37°C in a 5% CO2 atmosphere in
-MEM supplemented with 10% FBS, 2.2 g of sodium bicarbonate/liter, 2 mM glutamine, 0.1% penicillin-streptomycin, and 0.2 mg of Geneticin/ml.
Propagation of C. burnetii phase II.
The clone 4 phase II Nine Mile strain of C. burnetii, which is infective for cells but not for animals, was provided by Ted Hackstadt (Rocky Mountain Laboratories, National Institute for Allergy and Infectious Diseases, National Institutes of Health, Hamilton, Mont.) and was handled in a biosafety level II facility (21). Infective inocula were prepared as described previously (47). Nonconfluent Vero cells were cultured in T25 flasks at 37°C in
-MEM supplemented with 5% FBS, 0.22 g of sodium bicarbonate/liter, and 20 mM HEPES, pH 7 (MfbH). Cultures were infected with C. burnetii phase II suspensions for 2 to 6 days at 37°C in an air atmosphere. After being frozen at -70°C, the flasks were thawed, and the cells were scraped and passed 20 times through a 27-gauge needle connected to a syringe. Cell lysates were centrifuged at 800 x g for 10 min at 4°C. The supernatants were centrifuged at 24,000 x g for 30 min at 4°C, and pellets containing C. burnetii were resuspended with 0.5 ml of phosphate-buffered saline (PBS), aliquoted, and frozen at -70°C.
Infection of cells with C. burnetii.
HeLa cells plated in T25 flasks were washed several times with PBS and detached with trypsin-EDTA. After resuspension with MfbH, cells were plated on coverslips distributed in six-well plates. For infection, a 50-µl aliquot of the C. burnetii suspension was diluted with 550 µl of MfbH, and 100 µl of this dilution was added to each well. Except when indicated otherwise, cells were incubated for 48 h at 37°C in an air atmosphere. The same protocol was used for the infection of CHO cells overexpressing pEGFP-LC3.
Expression of Rab proteins and their mutants in HeLa cells by using the Sindbis virus system.
Coxiella-infected HeLa cell monolayers grown in 35-mm-diameter dishes were incubated with recombinant Sindbis viruses to overexpress GFP-Rab proteins in 300 µl of PBS containing 1% FBS. Virus absorption proceeded at room temperature for 1 h. The medium was replaced by 2 ml of MfbH, and the cells were incubated overnight at 37°C. Cells were mounted and immediately analyzed by fluorescence microscopy using an inverted microscope (Eclipse TE 300; Nikon) equipped with a charge-coupled device camera (Orca I; Hamamatsu). Images were processed with MetaMorph, version 4.5, software (Universal Images Corporation).
Transfection with pEGFP plasmids.
HeLa cells were grown in D-MEM supplemented with 10% FBS, 2.2 g of sodium bicarbonate/liter, 2 mM glutamine, and 0.1% penicillin-streptomycin in a 5% CO2 incubator at 37°C. The cells were transfected with the pEGFP vector alone or pEGFP plasmids encoding wild-type Rab7 (Rab7wt), Rab7T22N, a dominant-negative mutant, and the active Rab7Q67L mutant by using Lipofectamine (GIBCO-BRL) according to the manufacturer's instructions. After 48 h of transfection cells were infected with C. burnetii. The cells were analyzed and processed as described above.

RESULTS
The replication compartment of C. burnetii phase II displays autophagosomal markers.
To examine the compartment where
C. burnetii phase II survives
and multiplies, HeLa cells were infected for 48 h with the bacteria.
As previously shown (
42),
Coxiella-rich large vacuoles can be
easily distinguished by phase-contrast microscopy of infected
cells (Fig.
1, left). These vacuoles have been shown to be labeled
by antibodies against the LAMP-1 protein and to contain the
lysosomal hydrolase acid phosphatase (
23). To further characterize
the bacterial-replication compartment, we labeled
Coxiella-infected
HeLa cells with LysoTracker, a marker for acidic compartments.
As shown in Fig.
1 (right) and in agreement with previous observations
(
28), the large parasitophorous vacuoles were intensely labeled.
We have also observed small vesicles labeled by LysoTracker
next to large
Coxiella-containing vacuoles.
To investigate the possible involvement of an autophagic pathway,
we next incubated the cells with MDC, an autofluorescence-specific
marker of autophagosomes (
5,
32). The C
oxiella replication niche
was labeled by MDC (Fig.
2A, top), indicating that this compartment
has characteristics of an autophagosomal vacuole. The labeling
was heterogeneous since some vacuoles accumulated more marker
than others. Interestingly, clusters of MDC-labeled vesicles
were also observed in close proximity to parasitophorous vacuoles
(Fig.
2A, bottom). It has been proposed that autophagosomes
originate from an as yet undefined region of the endoplasmic
reticulum (ER). Therefore, we were interested in determining
if
Coxiella colocalizes with ER markers. Cells were labeled
with rhodamine 6G, and a typical reticular structure was observed.
However, no label surrounding the vacuoles was detected, only
empty spaces that look like "holes" where the large
Coxiella-containing
vacuoles are located (Fig.
2C, right).
Enzymes of the phosphatidylinositol 3-kinase (PI3K) family has
been implicated in the regulation of a multitude of intracellular
events (
12,
27). It has been shown that wortmannin (WM) inhibits
autophagy by blocking PI3K activity (
6,
32). Furthermore, 3-MA
is a specific inhibitor of autophagy that seems to also block
PI3K (
6,
40). Therefore, to further investigate the involvement
of autophagy in
C. burnetii infection, we tested the effect
of WM and 3-MA on the development of the large vacuoles. Table
1 shows that both compounds were inhibitory. To confirm the
relationship between
Coxiella-containing vacuoles and the autophagic
pathway, we studied the localization of LC3, a protein that
interacts specifically with the autophagosomal compartment (
26).
However, since the transfection and expression of pEGFP-LC3
in HeLa cells were low, CHO cells, which are easily infected
by
C. burnetii (
42,
43), were used instead. As shown in Fig.
2B (right), after 48 h of infection of stably transfected CHO-LC3
cells, the limiting membrane of the
Coxiella-containing vacuole
was strongly labeled with protein GFP-LC3. These results clearly
indicate that
Coxiella interacts with the autophagic pathway.
C. burnetii localizes in vacuoles labeled with Rab7.
It is well established that Rab proteins function in the tethering
and docking of vesicles to their target compartment, leading
to membrane fusion. Rab protein activity is regulated by the
binding and hydrolysis of GTP, by multiple effectors, and by
the signal transduction pathway (
48). GTPases have the ability
to cycle regularly between GTP- and GDP-bound states. Their
on/off regulatory function is restricted to the membrane compartments
where they are localized. A useful strategy to explore the function
of Rab proteins is the use of GTP-binding-defective (dominant-negative)
and GTPase-defective (active) mutants.
To study the interaction of the endocytic compartments with vacuoles containing C. burnetii, we examined the distribution of Rab5 and Rab7, early and late endosomal markers, respectively, on Coxiella-containing vacuoles formed in HeLa cells. Cells infected with Coxiella for 48 h were superinfected with wild-type and mutant forms of recombinant GFP-Rab5 or -Rab7 constructs of Sindbis virus for another 12 h. As shown in Fig. 3, the large Coxiella-containing vacuoles were clearly decorated with GFP-Rab7wt (top) or with GTPase-defective mutant GFP-Rab7Q67L (bottom). These results suggest that C. burnetii resides in a compartment labeled by Rab7, indicating that this compartment has characteristics of late endosomes and lysosomes.
Interestingly, the
Coxiella-containing vacuoles were also intensively
decorated with the GTPase-deficient Rab5 mutant (i.e., GFP-Rab5Q79L),
but they were not stained in cells transfected with Rab5wt or
dominant-negative mutant GFP-Rab5S34N (Fig.
4). The presence
of the Rab5-positive mutant on
Coxiella-containing vacuoles
might be explained by the observation that Rab5cQ79L allows
the interaction between endosome or phagosome and lysosome compartments
(
36).
Since the
Coxiella-containing vacuoles were heavily labeled
with GFP-Rab7wt, we next examined the distribution of GFP-Rab7T22N,
a dominant-negative mutant. For technical reasons we were unable
to generate recombinant Sindbis virus able to overexpress GFP-Rab7T22N.
Therefore, we used a different approach to overexpress this
protein. HeLa cells were transiently transfected with plasmid
pEGFP-Rab7wt and mutants. The expression and distribution of
EGFP-Rab proteins were similar to those observed by other authors
(
8). In the HeLa cells overexpressing EGFP-Rab7wt or dominant-positive
mutant EGFP-Rab7Q67L, the GFP signal was associated with vesicles
partly distributed throughout the cytoplasm and concentrated
in the perinuclear region. As expected, dominant-negative mutant
GFP-Rab7T22N showed a diffuse and widespread distribution (data
not shown).
Transiently transfected cells were subsequently infected with C. burnetii, and after 48 h the cells were analyzed by fluorescence microscopy. As shown in Fig. 5, top, similar to the results obtained with the recombinant Sindbis virus, in HeLa cells transfected with pEGFP encoding Rab7Q67L, large Coxiella-containing vacuoles were formed and a noteworthy ring-shaped EGFP signal on the vesicles was observed. In cells transfected with EGFP-Rab7wt, the EGFP-tagged protein showed a distribution essentially similar to that exhibited by mutant Rab7Q67L (data not shown). Conversely, in cells overexpressing the dominant-negative EGFP-Rab7T22N mutant, the protein presented a diffuse pattern and it was not localized on the vacuole-limiting membrane (Fig. 5, bottom). Furthermore, the formation of replication vacuoles seems to be delayed or partly impaired since the transfected cells had few and small Coxiella-containing vacuoles. These results suggest that Rab7-mediated vesicular transport is required for the formation and maintenance of the vacuoles that shelter C. burnetii.

DISCUSSION
In this study we present evidence that the compartment inhabited
by
Coxiella displays some of the features of autophagosomes,
such as uptake of MDC and presence of the protein LC3 (
5). Furthermore,
vacuolar development was reduced by 3-MA and WM, known inhibitors
of the autophagic pathway (
6,
40). Since parasitophorous vacuoles
that shelter
Coxiella also display lysosomal markers such as
LAMPs and lysosomal enzymes, it is possible that
C. burnetii resides in an autophagolysosome-like compartment. This is not
an unusual observation for an intracellular parasite since
Brucella abortus seems to reside within compartments resembling autophagosomes
(
35).
C. burnetii has two cell variants, the large-cell variant
(LCV), the more sensitive to environmental stress of the two,
and the small-cell variant (SCV), which is considered the dormant,
stress-resistant, and less metabolically active form (
23). Therefore,
it is possible that
Coxiella may transit through the autophagic
pathway to initially avoid the harsh environment of lysosomes,
perhaps during the transition from SCV to LCV. Indeed, Howe
and Mallavia (
25) have shown that phagosomes containing
C. burnetii exhibited a significant delay in fusion with lysosomes. These
authors have also shown, in an in vitro assay, increased protein
synthesis in
C. burnetii incubated at pH 5.5 (endosomal pH)
compared to that observed at pH 4.5 (lysosomal pH). These results
suggest that
C. burnetii may prefer a slightly less acidic compartment
perhaps with characteristics of a late endosomal or autophagosomal
compartment. The interaction between the autophagic compartments
and the
Coxiella-containing vacuole which has some lysosomal
characteristics could allow
Coxiella to obtain metabolites for
its intracellular growth and development.
In this report we have shown for the first time that the spacious vacuoles generated by Coxiella are heavily labeled by Rab7, a late endocytic marker. The presence of Rab7 antigen in the vacuolar membranes of C. burnetii phase II-infected mouse primary macrophages has been observed (S. Paul and S. Gomes, personal communication). Other intracellular parasites also appear to reside in vacuoles that become positive for Rab7 (10, 13, 30, 38, 39, 44). It has been shown that Mycobacterium tuberculosis and Legionella pneumophila phagosomes acquire staining for Rab7 and for the constitutively active mutant form of Rab7 (Rab7Q67L) in HeLa cells overexpressing these proteins (10). Also Salmonella enterica serovar Typhimurium seems to inhabit a compartment enriched in lysosomal glycoproteins and Rab7, acquired apparently by fusion with nonlysosomal vesicles (30). The functional importance of Rab7 in regulating membrane trafficking in the endocytic pathway has been established by the demonstration that expression of a dominant-negative Rab7 mutant interrupts the normal endocytic flow from early to late endosomes (19, 36). In addition, overexpression of a GFP-tagged Rab7 dominant-negative mutant has been shown to lead to dispersal of the lysosomal compartment (8). We have reported here not only that the Coxiella-containing vacuoles are labeled by Rab7 but also that this protein seems to regulate vacuole biogenesis since smaller parasitophorous vacuoles were observed in HeLa cells overexpressing dominant-negative mutant Rab7T22N. However, a more exhaustive analysis of the effect of this mutant is necessary to determine the role of Rab7 in the biogenesis of the Coxiella replication compartment. Also, further experiments need to be done to establish whether Rab7 is actively recruited to the Coxiella-containing phagosomes or if the protein is acquired by fusion with late endosomes. Indeed, we have observed large clusters of Rab7-positive vesicles in close proximity to the Coxiella replication compartment.
In agreement with our results it has also been shown that HeLa cells incubated with VacA, a toxin produced by Helicobacter pylori, develop large intracellular vacuoles in a Rab7-dependent fashion through a process that involves fusion between late endosomes (34). Interestingly, in cells overexpressing Rab5Q79L, VacA induces the formation of large vesicles positive for both Rab7 and Rab5Q79L. We have also observed that the large Coxiella-containing vacuoles were labeled by Rab5Q79L but not by Rab5wt, suggesting that the mutant protein is mistargeted or remains associated with the Coxiella replication compartment. Clemens et al. (9) have observed that large vacuoles stained positively for Rab5c and LAMP-1 are formed in HeLa cells overexpressing Rab5cQ79L. In contrast, in cells overexpressing Rab5cwt this colocalization was not observed. Furthermore, M. tuberculosis, which normally resides in a compartment that acquires Rab5 but excludes Rab7 and LAMP-1 and that avoids fusion with latex bead phagosomes (44), resides in a compartment that gets LAMP-1 and that fuses with latex bead phagosomes in HeLa cells overexpressing the Rab5cQ79L mutant. These results suggest that Rab5cQ79L allows the interaction between endosome or phagosome and lysosome compartments. Indeed, in a recent report it has been shown that Rab5aQ79L-positive vesicles colocalize with lysosomal membrane proteins and lysosomal enzymes (37). Therefore, an altered traffic between lysosomes and endosomes might explain the presence of Rab5Q79L on the large lysosome-like Coxiella replication compartment. However, since by fluorescence microscopy we are unable to distinguish the smallest Coxiella-containing vacuoles, we cannot discard the possibility that Rab5wt might be present in the tiny vesicles generated at the early time points of infection.
In summary, in the present report we have further characterized the Coxiella replication compartment and we have clearly shown that Rab7 is present in the parasite-containing vacuoles. Since C. burnetii replicates only when is phagocytosed and transported to the phagolysosome, dissecting this transport pathway at the molecular level will help us to find a therapeutic approach for this infectious agent.

ACKNOWLEDGMENTS
We specially thank Bo van Deurs for the generous gifts of plasmids
encoding the Rab7 protein and its mutants. We also thank Luis
S. Mayorga for critical reading of the manuscript.
This work was partly supported by grants from CONICET (PIP 0695/98), Agencia Nacional de Promoción Científica y Tecnológica (PICT97 no. 01-00111-02072, PICT99 no. 1-6058), and CIUNC (Universidad Nacional de Cuyo) to M.I.C. and W.B.

FOOTNOTES
* Corresponding author. Mailing address: Instituto de Histología y Embriología (IHEM)-CONICET, Facultad de Ciencias Médicas, Universidad Nacional de Cuyo, Casilla de Correo 56, Centro Universitario, Parque General San Martín, 5500 Mendoza, Argentina. Phone: 54-261-4205115, ext. 2675. Fax: 54-261-4494117. E-mail for Walter Berón:
wberon{at}fmed2.uncu.edu.ar. E-mail for María I. Colombo:
mcolombo{at}fmed2.uncu.edu.ar.

Editor: J. T. Barbieri

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Infection and Immunity, October 2002, p. 5816-5821, Vol. 70, No. 10
0019-9567/02/$04.00+0 DOI: 10.1128/IAI.70.10.5816-5821.2002
Copyright © 2002, American Society for Microbiology. All Rights Reserved.
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