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Infection and Immunity, December 2002, p. 7054-7062, Vol. 70, No. 12
0019-9567/02/$04.00+0 DOI: 10.1128/IAI.70.12.7054-7062.2002
Copyright © 2002, American Society for Microbiology. All Rights Reserved.
Kazuhide Kimbara,1,
T. K. Das Gupta,2 and A. M. Chakrabarty1*
Department of Microbiology & Immunology,1 Department of Surgical Oncology, University of Illinois College of Medicine, Chicago, Illinois 606122
Received 23 May 2002/ Returned for modification 29 August 2002/ Accepted 6 September 2002
| ABSTRACT |
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| INTRODUCTION |
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In addition to stabilization of p53 by NQO1, which inhibits its degradation (3), redox proteins may contribute to the activation of p53 by stimulating its DNA-binding activity as a transcriptional activator. For example, the oxidized form of p53, which is inactive for DNA binding, is greatly stimulated in its DNA-binding activity in the presence of a dual-function redox and repair protein, Ref-1, particularly in the presence of reducing agents (13). Since p53 transcriptionally regulates the level of proapoptotic proteins such as Bax, NOXA, and P53AIP1 (25, 28), mammalian redox proteins such as Ref-1 play an important role in p53-mediated induction of apoptosis by enhancing the transcription of proapoptotic genes in mammalian cells (8).
Redox proteins such as azurin and cytochrome c551 are involved in electron transfer during denitrification in P. aeruginosa (38). A great deal is known about the structure of these proteins, and many site-directed mutants are available (6, 7,39). Azurin is a type I blue copper protein with a molecular mass of 14 kDa, while cytochrome c551 (9 kDa) is a haem-containing cytochrome. Azurin possesses a relatively large hydrophobic patch close to the active site, and two residues in this hydrophobic patch, Met-44 and Met-64, are believed to be involved in its interaction with the redox partners cytochrome c551 and nitrite reductase (39). Similarly, amino acid residues such as His-46 and His-117 are important for electron transfer, since the site-directed mutants His-46Gly (H46G) and His-117Gly have only 34 and 15% of the activity of the wild-type azurin (7). The double mutant Met-44Lys/Met-64Glu (M44K/M64E) is deficient in binding to its redox partners and demonstrates 3.4 and 3.3% of the electron transfer activity of wild-type azurin towards cytochrome c551 and nitrite reductase, respectively (7). Although a great deal is known about these two redox proteins with regard to their electron transfer activity, nothing is known about any cytotoxicity of these two proteins towards phagocytic or other mammalian cells. In this article, we demonstrate that purified azurin and cytochrome c551 from P. aeruginosa exhibit cytotoxicity towards macrophages. We additionally demonstrate that azurin forms a complex with the tumor suppressor protein p53, generates reactive oxygen species (ROS), and induces apoptosis in macrophages. That the cytotoxicity is due to azurin and not due to contaminating cellular constituents such as cell wall lipopolysaccharides is clear from their absence in the purified wild-type or mutant azurin preparations and from the fact that several mutant azurins isolated by the same purification procedure as the wild type demonstrated very low cytotoxicity, even though they might have been contaminated by the same cellular constituents present in the wild type.
| MATERIALS AND METHODS |
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Purification of wild-type and mutant azurins. azuA was amplified by PCR according to the method described by Kukimoto et al. (15). For expression of the P. aeruginosa cytochrome c551 gene, a plasmid, pkk223-3-PAC551, was used as described by Hasegawa et al. (10). Periplasmic fractions including azurin and cytochrome c551 from recombinant E. coli strains were obtained according to the method described by Cornelis et al. (5). Recombinant E. coli cells harvested from 5-liter cultures were washed with 1.2 liter of 10 mM Tris-HCl, pH 8.0, and centrifuged. The resultant cell pellets were suspended in 400 ml of 25% sucrose solution containing 0.1 mM EDTA and were shaken at room temperature for 15 min prior to centrifugation. The resultant cell pellets were suspended in 400 ml of ice-cold water and shaken again for 15 min prior to centrifugation. This supernatant was used as the periplasmic fraction. A mixture of 1 M Tris-HCl, pH 8.0, 1 M CuSO4, and 0.1 M potassium ferricyanide was then added to the periplasmic fraction containing azurin to adjust their final concentrations to 10, 1, and 0.1 mM, respectively. The fraction was mixed with a Q-Sepharose Fast Flow resin that had previously been equilibrated with 10 mM Tris-HCl, pH 8.0. The flowthrough fraction unbound to the Q-Sepharose gel was concentrated by Amicon YM-10. Purified azurin was obtained after gel filtration using a Hiprep 16/60 Superdex 75 column. The periplasmic fraction containing cytochrome c551 in 10 mM Tris-HCl, pH 8.0, was concentrated by Centriprep YM-3. The fraction was applied to a MonoQ column equilibrated with 10 mM Tris-HCl, pH 8.0. Proteins were eluted using a linear gradient from 0 to 0.15 M NaCl in 10 mM Tris-HCl, pH 8.0. The fraction showing redness was eluted with 0.05 M NaCl. This fraction was applied to a Superdex 75 column as described for azurin, and the red fraction was obtained as purified cytochrome c551.
Macrophage culture and cytotoxicity assay. The J774 cell-line-derived murine macrophage cells were cultured in RPMI 1640 medium containing L-glutamine, buffered with 10 mM HEPES, and supplemented with 10% fetal bovine serum, 100 U of penicillin/ml, and 100 µg of streptomycin/ml at 37°C in a humidified incubator with 5% CO2. For measurement of the cytotoxic activity of azurin or cytochrome c551, the 3-(4,5-dimethylthiazol-2-yl-2,5-diphenyl tetrazolium bromide) (MTT) assay (23) was conducted as described previously (14). Then 105 cells of the macrophages per well were seeded onto 96-well culture plates in 200 µl of RPMI 1640 medium. After overnight culture, the cells were washed with the same medium and were then replaced with fresh medium containing azurin. After 24 h treatment, 10 µl of 5-mg/ml MTT solution was added to the culture and incubated for 2.5 h at 37°C. The MTT reaction was terminated by the addition of 40 mM HCl in isopropanol. The MTT formazan formed was measured spectrophotometrically as described earlier (23).
Measurement of apoptotic cells. To determine the extent of cytotoxicity due to induction of apoptosis, 1.5 x 106 cells were seeded per well into six-well culture plates in 3 ml of RPMI 1640 medium. After overnight culture, the cells were washed with the same media and then were replaced with 2 ml of new media containing 20 µg of wild-type azurin or the mutant proteins per ml. After 16 h of treatment, flow cytometry analysis (Becton Dickinson) with the ApoAlert mitochondrial membrane sensor kit (Clontech) was used to determine the extent of apoptotic cells.
Preparation of macrophage cytosolic extracts for caspase assays. The macrophage cytosolic extracts were prepared as described by Zaborina et al. (43). Briefly, 20 ml of macrophage culture medium in a culture bottle was removed. Ten milliliters of ice-cold phosphate-buffered saline (PBS) (pH 7.2) was added, and adhered cells were lifted gently off the bottle. The cytosolic extract was then prepared as described previously (43). Caspase 9 and caspase 3 assays in the macrophage cytosolic extracts were conducted as previously described (43), using N-acetyl-Leu-Glu-His-Asp-p-NO2-aniline and N-acetyl-Asp-Glu-Val-Asp-p-NO2-aniline as substrates as described in the Fig. 2 legend.
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Gene array.
To determine the gene expression profile of murine macrophages, the cells were incubated with 50 µg of azurin/ml and 25 µg of cytochrome c551/ml or without any treatment as a control for various periods (0, 3, 6, and 12 h). Total RNA from macrophages was isolated by the RNAqueous-Midi kit (Ambion). The mouse Apoptosis-1 GEArray kit (Super Array Inc., Bethesda, Md.) with 23 apoptosis-related genes, including the Bcl-2 family, caspase family, Fas, TRAIL, NF-
B, and p53, was used to measure the level of gene expression. Membranes and a [
-32P]cDNA probe were hybridized overnight. To compare the expressions of apoptotic genes in macrophage cells, signal intensity was measured by phosphorimager.
Subcellular fractionations of macrophages. Macrophages were treated with azurin (50 µg/ml) and cytochrome c551 (25 µg/ml) for 0, 3, 6, and 12 h. Mitochondria and cytosol fractions were prepared as described by Han et al. (9). After treatment, macrophages were suspended in buffer A (20 mM HEPES-KOH, pH 7.5, 10 mM KCl, 1.5 mM MgCl2, 1 mM EGTA, and 1 mM dithiothreitol [DTT]) containing 250 mM sucrose and proteinase inhibitor cocktail (Sigma). The resultant suspension was passed five times through a 26-gauge needle. After centrifugation at 1,000 x g for 10 min, the supernatant was subjected to centrifugation at 10,000 x g for 20 min at 4°C to separate the mitochondrial pellet, which was resuspended in 10 mM Tris-acetate, pH 8.0-0.5% NP-40-5 mM CaCl2) buffer. For generating a cytosol fraction, the supernatant was centrifuged at 100,000 x g for 1 h. The nuclear extracts were prepared as described by Raffo et al. (27). Macrophages were lysed by homogenization in hypotonic cell lysis buffer (10 mM HEPES, pH 7.9, 1.5 mM MgCl2, 10 mM KCl, 0.5 mM DTT, and protease inhibitor cocktail). The nuclei were separated by centrifugation and were resuspended in isotonic-glycerol nuclear lysis buffer (20 mM HEPES, pH 7.9, 25% glycerol, 420 mM NaCl, 0.2 mM EDTA, 0.5 mM DTT, and protease inhibitors). Monoclonal antibodies raised against p53, Bax, and cytochrome c (Santa Cruz Biotechnology) were used for immunoblotting. Blots were also probed for actin by using monoclonal antiactin antibody (Sigma) and mitochondrial membrane protein cytochrome c oxidase subunit IV (COX IV) with monoclonal anti-COX IV antibody (Molecular Probes) for checking cross-contamination and as internal controls. Protein bands were visualized using enhanced chemiluminescence reagents (Amersham Corp.).
Microscopy. Azurin was conjugated with the fluorescent chemical Alexa Fluor 468 (Molecular Probes) and was incubated with macrophages for 30 min. Entry of fluorescent chemically labeled azurin into the macrophages was observed by confocal microscopy. Morphological changes of macrophages were seen by phase-contrast microscopy with a 40x objective.
Glycerol gradient centrifugation analysis. Complex formation between wild-type azurin, mutant azurin, and p53 was confirmed by glycerol gradient centrifugation analysis (24, 34, 42). Each purified protein, wild-type or mutant azurin, full-length glutathione S-transferase (GST)-p53, bovine serum albumin (BSA), or GST was used in 180-pmol amounts before loading. To allow complex formation, various combinations of proteins were incubated at 4°C overnight. The stepwise 5, 15, 20, 25, and 35% glycerol gradient was prepared as described by Shankar et al. (32). Sample proteins were mixed in a 5% glycerol solution (top layer). After centrifugation, fractions from each gradient were collected and tested by immunoblotting with antiazurin antibody and anti-p53 antibody.
Determination of p53 stability. To determine the stability of p53 in the presence of bacterial redox proteins, the macrophages were either treated with buffer (control) or treated with azurin (50 µg/ml) and cytochrome c551 (25 µg/ml) for 12 h. Cycloheximide (20 µg/ml) was then added to the culture media to prevent protein synthesis in the cells (18). p53 levels were measured in equal amounts of cell extract proteins by immunoblotting using a monoclonal anti-p53 antibody after various periods of cycloheximide addition. The intensity of bands at each time point after cycloheximide addition was measured densitometrically. The level of p53 was calculated at 0 to 6 h after cycloheximide addition. Because of the 12-h pretreatment of macrophages with azurin-cytochrome c551, the level of p53 at 0 h of cycloheximide addition is higher in the extracts of treated macrophages than that in the control; however, the levels are plotted as a percentage of the p53 level (with 0-h cycloheximide at 100%) in each case.
Flow cytometry analysis of ROS. For the detection of ROS in wild-type azurin- and mutant azurin (50 µg/ml each)-treated J774 cell-line-derived macrophages, 2', 7'-dichlorodihydrofluorescein-diacetate (DCHF-DA; Sigma) was used as a substrate (10 µM) by staining live cells for 30 min at 37°C and measuring the DCF (2',7'-dichlorofluorescein) green fluorescence by flow cytometry (16). Ten thousand cells were collected for flow cytometry analysis in each case. The protective effect of ROS-removing enzyme superoxide dismutase (SOD) or the vitamin E analogue Trolox (6-hydroxy-2,5,7,8-tetramethyl chroman-2-carboxylic acid; Sigma) on cytotoxicity was tested by incubating macrophages treated with 25 µg of azurin per ml in the absence or presence of various concentrations of these antioxidants. The MTT assay for cytotoxicity was conducted following 1-h preincubation with antioxidants and then exposure for 16 h to azurin and SOD or Trolox.
| RESULTS AND DISCUSSION |
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To determine a time course of the initiation of apoptotic activity when macrophages are subjected to azurin-cytochrome c551 treatment, we used the TUNEL assay to determine the extent of nuclear DNA fragmentation. The incorporation of fluorescein-conjugated dUTP in the fragmented nuclear DNA, leading to enhanced green fluorescence imparted by fluorescein and detected by confocal microscopy, demonstrated the initiation of apoptosis in macrophages at around 5 or 6 h and continuing beyond 12 h (Fig. 2C).
To determine if induction of apoptosis by azurin-cytochrome c551 might be due to transcriptional activation or repression of proapoptotic or antiapoptotic genes, we used DNA array chips harboring 23 such murine genes and determined the extent of expression of these genes as a function of azurin-cytochrome c551 treatment of murine macrophages for 3, 6, and 12 h. The data did not show significant (more than twofold) alteration in the expression of these genes following treatment with azurin-cytochrome c551.
Subcellular localization of azurin and the tumor suppressor protein p53. In order to see if the bacterial redox proteins may trigger apoptosis in nonphagocytic cells, we tried several mammalian cell lines, including p53-positive and p53-null cell lines. We noticed that p53-negative cell lines were resistant to undergoing apoptosis in the presence of azurin-cytochrome c551, while the p53-positive cell lines were more susceptible (42a). Since p53 is a known inducer of apoptosis (2, 31, 40), these observations indicated that p53 might play a role in the induction of apoptosis by azurin-cytochrome c551. To see if treatment with azurin-cytochrome c551 might alter the intracellular level of p53, we treated macrophages with azurin and cytochrome c551 (50 and 25 µg/ml, respectively) for 0, 3, 6, and 12 h and measured the level of p53 in the extracts of the treated (or untreated [0 h]) macrophages by Western blotting. We also measured the level of actin as an internal control (Fig. 3A and B). Significant elevation in the level of p53, but not of actin, was observed when the macrophages were treated with the redox proteins for 12 h (Fig. 3A and B).
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To localize azurin during the treatment of macrophages with this protein, we used confocal microscopy of macrophages incubated for 30 min with chemically labeled (Alexa Fluor 468) green fluorescent azurin (Fig. 3C). Azurin was found to be located within the macrophage cell. Unlike azurin, another labeled protein, GST, did not show entry or intracellular accumulation (data not shown). We also examined various subcellular fractions for the presence of azurin by Western blotting using antiazurin antibody (Fig. 3D). Azurin was found to be localized in the cytosol and the nuclear fractions. The concentration of internalized azurin increased with an increasing period of incubation (Fig. 3D). No azurin was found in mitochondria. Since the redox-negative mutant azurin proteins had low cytotoxicity (Fig. 1B), it was of interest for us to see if this was due to lack of internalization of mutant azurins or a different subcellular localization. Incubation of the macrophages with the wild-type and mutant azurin proteins showed localization of both types of azurin in the nuclear fraction and in the cytosol (data not shown). This suggested that the low cytotoxicity of mutant azurin proteins is not due to a lack of entry into the macrophages.
Azurin forms a complex with p53 and stabilizes it. As previously mentioned, mammalian redox proteins such as NQO1 (3) and Ref-1 (8, 13) modulate p53 level or its activity by binding to it and preventing its degradation or enhancing its DNA-binding activity. We thus wanted to determine if the bacterial redox protein azurin or cytochrome c551 could form complexes with p53 and elevate its level by stabilizing it. Glycerol gradient centrifugation to study complex formation among sigma factor-anti-sigma factor (42) or other interacting proteins (24, 34) has previously been used. In this method, the proteins are sedimented by ultracentrifugation through a glycerol gradient, either singly or in combination. If the two proteins form a complex, then the complex sediments at a higher glycerol gradient than do the individual proteins. We used a 5 to 35% glycerol gradient to sediment wild-type azurin, p53 (a GST-p53 fusion protein was used), cytochrome c551, BSA, GST, and mutant azurin proteins H46G and the double mutant M44K/M64E either singly or in various combinations. The presence of azurin in various glycerol gradient fractions was then detected by collecting samples from these fractions and running Western blots using antiazurin or monoclonal anti-p53 (or anti-cytochrome c551) antibodies. Azurin by itself sedimented at 5% glycerol (Fig. 4A). When azurin and GST-p53 fusion protein were incubated before sedimentation, azurin could be detected at 5, 15, 20, and 25% glycerol fractions (Fig. 4A), suggesting the presence of a polydisperse complex. p53 is known to form aggregates (17) and was found to be present by itself in 5, 15, 20, and 25% glycerol gradient fractions as various aggregates (Fig. 4B). Incubation with azurin did not lead to its sedimentation at higher glycerol concentration, presumably because of the low molecular mass (14 kDa) of azurin. Azurin is known to associate with cytochrome c551 for its electron transfer reaction (38) and can be seen to form a polydisperse complex with cytochrome c551, similar to that with p53 (Fig. 4A). Other proteins such as BSA and GST, however, had no ability to form complexes with azurin (Fig. 4A), suggesting the specificity of azurin-p53 complex formation. The inability of GST to form a complex with azurin strongly suggests that the complex formation of azurin with GST-p53 fusion protein is due to p53 and not due to GST. Interestingly, the two mutant azurin proteins had much less affinity for complex formation with p53. It is not known if the reduced cytotoxicity of the mutant proteins might be due to reduced affinity for this complex formation, rather than to loss of their redox activity. Addition of the M44K/M64E mutant azurin to wild-type azurin had no significant effect on its cytotoxicity, indicating a lack of competition between the two.
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Correlation between cytotoxicity and ROS generation by azurin. Redox proteins such as PIG3 (26) and NQO1 (3) appear to be at least partly responsible for an increase in the formation of ROS in mitochondria, which has been implicated in the induction of apoptosis (21); however, ROS inhibitors have been reported to be unable to protect against p53-mediated apoptosis in some cases (31). On the other hand, antioxidants such as SOD have been shown to protect acute myeloblastic leukemia cells from undergoing apoptosis in the presence of the oxidative agent Etoposide (20). To see if the bacterial redox protein azurin might elicit a higher level of ROS formation in macrophages, we treated the macrophages either with buffer (untreated) or with 50 µg of wild-type azurin or mutant azurins H46G and M44K/M64E per ml. The level of ROS was then determined periodically for the next 24 h as DCF fluorescence generated from the substrated DCHF-DA (16). As opposed to buffer-treated macrophages, macrophages treated with wild-type azurin showed significant generation of ROS, while treatment with the mutant azurins generated a lower level of ROS, particularly during prolonged treatment (Fig. 5A). To see the effect of antioxidants such as catalase, SOD, and Trolox, a vitamin E analogue, on the azurin-induced cytotoxicity towards macrophage cells, macrophages were either not treated with azurin (0 µg/ml) or were treated with azurin at 25 µg/ml with or without concomitant addition of SOD at 0.1 and 1.0 kU/ml or Trolox at 0.1 and 1.0 mM (Fig. 5B). Similar experiments were done with catalase. While catalase had no effect on azurin-induced cytotoxicity, SOD at 1.0 kU/ml or Trolox at 1.0 mM significantly reduced the cytotoxicity exerted by 25 µg of azurin/ml (Fig. 5B), thus demonstrating a correlation between the level of Trolox- or SOD-susceptible ROS and azurin-induced cytotoxicity in macrophages. The redox-negative mutants generated lesser quantities of ROS and had less cytotoxicity, confirming the role of ROS, at least partly, in azurin-mediated induction of apoptosis in macrophages.
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The enhanced cytosolic or mitochondrial Bax levels in murine macrophages during treatment with azurin-cytochrome c551 for prolonged periods (Fig. 3B) is most likely a reflection of high p53 levels in such cells. The reduced cytotoxicity of the two redox-negative mutant azurin proteins may similarly be correlated with their reduced ability to form complexes with p53 (Fig. 4A) and not to their loss of redox activity. The loss of the redox enzymatic functions in these two mutants, however, might also abolish their ability to activate p53-mediated binding to the response element of the bax genes (36) or to generate a significant amount of ROS. Further studies are under way to define clearly the role of enzymatic redox activity on azurin-mediated cytotoxicity and the ability of wild-type and redox-negative mutant azurins to modulate the DNA-binding activity of p53, as demonstrated for Ref-1 (8, 13).
| ACKNOWLEDGMENTS |
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We thank Yasuo Igarashi of the University of Tokyo for the gift of the cytochrome c551 gene and J. A. Cole of the University of Birmingham, Birmingham, United Kingdom, for the gift of the E. coli strain JCB7120, where the cytochrome c551 gene was expressed.
| FOOTNOTES |
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Present address: Department of Surgery, University of Chicago, Chicago, Ill. ![]()
Present address: Environmental Biotechnology Laboratory, Railway Technical Research Institute, Tokyo 185-8540, Japan. ![]()
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