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Infection and Immunity, February 2002, p. 451-461, Vol. 70, No. 2
0019-9567/01/$04.00+0 DOI: 10.1128/IAI.70.2.451-461.2002
Copyright © 2002, American Society for Microbiology. All Rights Reserved.
Program in Infectious Diseases and Immunity, School of Public Health, University of California at Berkeley, Berkeley, California,1 Department of Medicine, Pathology and Microbiology, University of Colorado Health Sciences Center, Denver, Colorado2
Received 26 June 2001/ Returned for modification 3 October 2001/ Accepted 18 October 2001
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S. enterica serovar Enteritidis causes systemic infections in mice. In orally infected mice, bacteria can be recovered from many organs, including the liver, spleen, intestine, ovaries, and blood. Death can occur rapidly (<12 h after infection), although the exact cause of death is not entirely clear. We have previously reported that clinical isolates of S. enterica serovar Enteritidis exhibit a wide range of 50% lethal doses (LD50) after oral challenge in BALB/c mice (29). In contrast to S. enterica serovar Typhimurium isolates, which usually have an oral LD50 of approximately 105 organisms (S. Lu and L. W. Riley, unpublished results), clinical S. enterica serovar Enteritidis isolates may have oral LD50 of less than 100 organisms. S. enterica serovar Enteritidis isolates are quite heterogeneous with respect to virulence-associated phenotypes determined in vitro, and these in vitro phenotypes correlate poorly with virulence in mice. However, one clinical isolate (SE2472) with an oral LD50 of 16 organisms was found to be significantly more resistant than other isolates to acidified sodium nitrite (ASN), which generates a variety of reactive nitrogen intermediate (RNI) and reactive oxygen intermediate (ROI) products (29). Isolate SE2472 was also found to be more resistant to other RNI/ROI generators, such as S-nitrosoglutathione (GSNO) and hydrogen peroxide (H2O2), than ASN-susceptible isolate SE8743.
Microbes have evolved a variety of strategies to defend themselves against toxic reactive oxygen and nitrogen products in aerobic and anaerobic environments. For pathogens, differences in the responses to such stresses in vivo may determine the clinical outcome for an infected mammalian host. Generation of RNI and ROI is essential for the defense against Salmonella in mice (12, 17, 37). De Groote et al. have observed oxygen-dependent and -independent antimicrobial activities of different redox forms of NO against isogenic wild-type and mutant Salmonella strains in vitro (11). In Escherichia coli and Salmonella, at least four global regulators are responsible for much of the response to molecular oxygen. These regulators include the OxyR, SoxRS, Fnr, and ArcAB systems (2, 28, 31). OxyR and SoxRS are activated by reactive oxygen species, such as hydrogen peroxide and superoxide, respectively (7, 22). Disruption of the transcriptional regulators oxyR and soxS affects the oxidative stress responses in vitro but does not appear to affect the virulence of S. enterica serovar Typhimurium in mice (19, 39). However, disruption of genes encoding bacterial products directly involved in detoxification or electron transport and energy transduction (zwf and sodC) has been shown to increase the susceptibility of S. enterica serovar Typhimurium to RNI and to killing by mice (18, 30). Insertion mutations in the metL gene rendered S. enterica serovar Typhimurium hypersusceptible to the nitric oxide (NO) donor compound GSNO, and such a strain became attenuated in mice (13). These observations indicate the importance of RNI in Salmonella infection control in vivo.
We investigated the molecular basis of the RNI/ROI resistance of S. enterica serovar Enteritidis isolate SE2472. In this report, we provide evidence that ArcA, the response regulator of the ArcAB global regulatory system, is essential for nitrosative and oxidative stress resistance in S. enterica serovar Enteritidis SE2472.
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Bacterial strains and plasmids.
The bacterial strains and plasmids used in this study are shown in Table 1. S. enterica serovar Enteritidis isolates SE2472 and SE8743 were kindly provided by Duc Vugia and Sharon Abbott of the Department of Health Services, State of California, and have been described previously (29). E. coli DH5
(Gibco/BRL, Gaithersburg, Md.) was used as the host for all recombinant DNA manipulations. Plasmid vector pRB3-273C (3) was used to construct a genomic library from isolate SE2472. S. enterica serovar Typhimurium LB5000 is a restriction-deficient LT2 derivative (5). Bacteriophage P22 was used for generalized transduction. Plasmids pKD4 and pKD46 used for mutagenesis of S. enterica serovar Enteritidis were generously provided by Barry Wanner (Purdue University, West Lafayette, Ind.). Plasmid pKD4 contains the kanamycin resistance gene sequence, and pKD46 contains the Red recombinase gene. All bacterial strains were grown aerobically with shaking at 225 rpm unless otherwise stated. Anaerobic cultures were grown by using the Hungate method and peptone-yeast extract medium obtained from Anaerobe Systems.
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TABLE 1. Bacterial strains and plasmids
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by electroporation. Approximately 5 x 103 recombinant DH5
colonies were obtained, which were estimated to represent approximately 85% of the S. enterica serovar Enteritidis genome. Plasmid DNA was purified from the DH5
host and transformed into S. enterica serovar Typhimurium LB5000. Plasmid DNA was purified from LB5000 and transformed into SE8743 (15). The resulting library was plated onto Luria-Bertani (LB) agar with 100 µg of ampicillin per ml, and colonies were scraped from the plate and exposed to 15 mM sodium nitrite at pH 5.0 (ASN). After exposure to ASN, the Salmonella culture was plated onto LB agar supplemented with ampicillin and incubated overnight at 37°C. All colonies that survived the first round of ASN stress were scraped from the plates for another round of selection. After three rounds of screening, plasmid inserts were amplified from the surviving bacteria by PCR and sequenced by using an ABI310 sequencer and a Big-dye sequencing kit (Applied Biosystems, Foster City, Calif.). Sequence analysis of arcA loci of SE2472 and SE8743. To compare the arcA locus of SE2472 and the arcA locus of SE8743, we amplified the genomic DNA of each isolate with primers PK2F3 (5'-AGGTAGCAAACATGCAGACC) and PK2R2 (5'-CAGGAGGGAAAGCGAGGC). This pair of primers was designed to amplify a DNA sequence from 11 bp upstream to 100 bp downstream of arcA. The PCR products were then sequenced with the ABI310 sequencer and a Big-dye sequencing kit (Applied Biosystems).
Mutagenesis of S. enterica serovar Enteritidis. Mutagenesis of the arcA gene of S. enterica serovar Enteritidis SE2472 was carried out by using the gene disruption method described by Datsenko and Wanner (9), except that 10 mM arabinose was used to induce expression of the Red recombinase instead of 1 mM arabinose as described by Datsenko and Wanner. Oligonucleotide primers 5'-TCTTATCGTTGAAGACGAGTTGGTAACACGCAACACGTTGAAAA GTATTTTCGAAGCGGAGTGTAGGCTGGAGCTGCTTC and 5'-CTTATCGTTGAAGACGAGTTGGTAACACGCAACACGTTGAAAAGTATTTTCG AAGCGGAGTGTAGGCTGGAGCTGCTTC were used to amplify the kanamycin resistance gene, and pKD4 was used as the template. These oligonucleotide primers contain a sequence of the kanamycin resistance gene and nucleotides 17 to 76 and 667 to 726 of the arcA gene, respectively. The arcA sequence from nucleotide 77 to nucleotide 666 was replaced with the kanamycin resistance gene by homologous recombination between the genomic DNA and the PCR product. Individual colonies obtained after electroporation were cultured in 1 ml of superbroth (1) overnight. The cultures were pelleted and resuspended in 100 µl of water. The resuspended bacteria were then boiled for 10 min and centrifuged for 10 min, and the supernatant was used to characterize the targeted region by performing PCR with flanking primers PK2F3 and PK2R2 and internal primers K1 and K2 (9). To confirm the interruption of the arcA locus, the junctions of the recombination sites were sequenced. Once homologous recombination was confirmed, the arcA mutation was transduced into a fresh culture of SE2472 by using phage P22, and individual phage-free transductants were selected for further analysis.
Assays of bacterial survival after exposure to nitrosative, oxidative and other stresses. Freshly transformed bacteria were cultured in 2 ml of LB medium at 37°C overnight with shaking. Antibiotics were added as appropriate. Portions (20 µl) of the overnight cultures were added to 2-ml portions of LB medium containing one of the following chemicals: sodium nitrite, hydrogen peroxide, sodium chloride, or sodium dodecyl sulfate (SDS). Survival in the presence of GSNO was assayed in M9 minimal medium with 1:1,000 dilutions of overnight cultures. Survival in the presence of sodium nitrite and GSNO was assayed at pH 5.0, while other stress assays were performed at pH 7.0. In all assays the cultures were grown aerobically with shaking at 225 rpm. After exposure to RNI, ROI, or other stresses, aliquots of cultures were diluted and plated in triplicate. Bacterial colonies were enumerated by determining the number of CFU after overnight incubation in order to determine the bacterial concentrations.
Mouse oral infection studies. Mice were infected with wild-type SE2472 and its derivatives as previously described (29). The bacteria were diluted in phosphate-buffered saline and used for infection. Groups of eight 6- to 8-week-old BALB/c and C3H/HeN mice (Charles River Laboratories, Kingston, N.Y.) were used for intragastric infection experiments. Each mouse received approximately 3 x 105 to 5 x 105 organisms in 0.25 ml of phosphate-buffered saline through a feeding needle. The mice were monitored for 2 weeks after infection, and mortality during this period was recorded.
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FIG. 1. ArcA increases resistance of S. enterica serovar Enteritidis to ASN. Cultures of SE2472, SE8743, and SE8743 transformed with vector pRB3-273C or plasmid pRB3arcA were grown in the presence of 15 mM sodium nitrite in pH 5.0 LB medium, and bacterial concentrations were determined by plating. The values are the concentrations of surviving bacteria after exposure to ASN. At least three experiments were performed, and the results of a representative experiment performed in triplicate are shown. The error bars indicate standard deviations.
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valine) and from that of E. coli ArcA at positions 127 (alanine
valine) and 237 (glutamine
glutamic acid). We renamed plasmid pK2 pRB3arcA to reflect the nature of the insert. pRB3arcA provides GSNO and H2O2 resistance to SE8743. Since plasmid pRB3arcA provided ASN resistance to SE8743, we determined whether this plasmid also mediated resistance to other RNI/ROI products. Survival of SE8743 transformed with pRB3arcA was assayed in the presence of 4 mM GSNO at pH 5.0 and in the presence of 5 mM hydrogen peroxide at neutral pH. Compared to untransformed SE8743 and SE8743 transformed with vector pRB3-273C alone, SE8743 transformed with pRB3arcA exhibited enhanced survival under both conditions (Fig. 2). After 7 h of exposure to 4 mM GSNO at pH 5.0, the concentration of viable SE8743 transformed with pRB3arcA decreased less than 1 log10. In contrast, the concentration of SE8743 transformed with pRB3-273C decreased from more than 106 CFU/ml to approximately 102 CFU/ml over the same period, and untransformed SE8743 was completely killed. This indicated that pRB3arcA conferred at least a 3-log10-fold survival advantage on SE8743 in the presence of the stress induced by 4 mM GSNO (Fig. 2A). Interestingly, pRB3arcA-transformed SE8743 exhibited even better survival than resistant isolate SE2472, further demonstrating that overexpression of ArcA effectively increased the resistance of S. enterica serovar Enteritidis to GSNO (Fig. 2A). Exposure to 5 mM hydrogen peroxide for 2 h at pH 7.0 resulted in about a 1-log10 reduction in the concentration of viable SE8743 organisms transformed with pRB3arcA, and the bacterial count returned to the original level at the end of the assay (6 h). Exposure of untransformed SE8743 or SE8743 transformed with pRB3-273C to the same conditions resulted in sharp decreases, about 3 log10 after 2 h and more than 4 log10 after 6 h. Therefore, by the end of the assay SE8743 transformed with pRB3arcA had a survival advantage of 4-log10-fold compared to bacteria transformed with vector pRB3-273C (Fig. 2B). In contrast to the effect of plasmid pRB3arcA on GSNO resistance, pRB3arcA did not increase the level of resistance of transformed SE8743 to hydrogen peroxide to the level of resistance of SE2472 (Fig. 2B). This result suggests that overexpression of ArcA might be more effective against RNI than against ROI.
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FIG. 2. ArcA increases the resistance of S. enterica serovar Enteritidis to GSNO and hydrogen peroxide. Cultures of SE2472, SE8743, and SE8743 transformed with vector pRB3-273C or plasmid pRB3arcA were grown in the presence of 4 mM GSNO in pH 5.0 M9 minimal medium (A) or in the presence of 5 mM hydrogen peroxide in pH 7.0 LB medium (B). Bacterial concentrations were determined by plating. The values are the concentrations of surviving bacteria after exposure to GSNO (A) or H2O2 (B). At least three experiments were performed, and the results of a representative experiment performed in triplicate are shown. The error bars indicate standard deviations.
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FIG. 3. ArcA does not protect S. enterica serovar Enteritidis from heat, detergent, salt, or low pH. Cultures of SE8743 transformed with vector pRB3-273C or plasmid pRB3arcA were subjected to 52°C (A), 5% SDS (B), 1 M NaCl (C), or pH 4.0 in LB medium (D). Bacterial concentrations were determined by plating. The values are the concentrations of surviving bacteria after exposure to the stress conditions. At least two experiments were performed, and the results of a representative experiment performed in triplicate are shown. The error bars indicate standard deviations.
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Construction of an arcA mutant. We demonstrated that overexpression of arcA on a multicopy plasmid protects S. enterica serovar Enteritidis against RNI and ROI stresses. It was therefore of interest to determine whether arcA is essential for bacterial defense against these stresses at the physiological level of expression. An arcA mutant of S. enterica serovar Enteritidis was generated by using the Red recombinase system described by Datsenko and Wanner (9). The DNA sequence encoding ArcA amino acids 28 to 223 (of a total of 238 amino acids) was successfully replaced with a kanamycin resistance cassette. Four candidate mutant colonies were screened by PCR performed with both flanking primers and internal kanamycin resistance cassette primers. The primers and expected size of a PCR product obtained following the gene replacement are shown in Fig. 4A. All four colonies displayed the expected pattern after PCR, and two of the patterns are shown in Fig. 4B. To confirm that the expected homologous recombination event occurred, we sequenced the junction regions of the kanamycin resistance and arcA genes. The sequences observed at both the upstream and downstream junction regions were exactly as predicted.
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FIG. 4. Generation of an arcA mutation in S. enterica serovar Enteritidis SE2472. (A) Structures of the wild-type and mutant arcA alleles. The coding region of arcA is represented by an open box, and Kanr is represented by a cross-hatched box. The positions and designations of the primers used to characterize the mutants are shown next to the alleles. (B) Characterization of two arcA mutant clones by PCR. The genomic DNA of wild-type strain SE2472 and mutant clones 6 and 7 were PCR amplified by using the primers shown in panel A. Numbers on the left are molecular sizes in kilobases.
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FIG. 5. ArcA mutant of S. enterica serovar Enteritidis exhibited normal growth under both aerobic and anaerobic conditions. Wild-type strain SE2472 (WT), the SE2472 arcA mutant (arcA-), and vector pRB3-273C- and plasmid pRB3arcA-transformed arcA mutant SE2472 (arcA-[pRB3-273C] and arcA-[pRB3arcA], respectively) were grown in peptone-yeast extract medium either aerobically (A) or anaerobically (B). The concentrations of bacteria were determined by sampling and plating after incubation.
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After 4 h of exposure to 4 mM GSNO at pH 5.0 in M9 medium, the arcA mutant decreased over 4 logs, while the wild-type strain decreased minimally (Fig. 6A). To demonstrate that the observed phenotype was specifically attributable to the arcA mutation, we transformed pRB3arcA into the arcA mutant and tested the transformants in the same assay. While the pRB3-273C vector-transformed arcA mutant exhibited the same level of survival as the untransformed mutant, the pRB3arcA plasmid fully compensated for the deficit, indicating that the increased susceptibility to GSNO was indeed due to the arcA mutation (Fig. 6A).
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FIG. 6. ArcA mutant of S. enterica serovar Enteritidis is more susceptible to GSNO and hydrogen peroxide. Cultures of SE2472 (WT), the SE2472 arcA mutant (arcA-), and vector pRB3-273C- and plasmid pRB3arcA-transformed arcA mutant SE2472 (arcA-[pRB3-273C] and arcA-[pRB3arcA], respectively) were grown in the presence of 4 mM GSNO in pH 5.0 M9 minimal medium (A) or in the presence of 5 mM hydorgen peroxide in pH 7.0 LB medium (B). Bacterial concentrations were determined by plating. The values are the concentrations of surviving bacteria after exposure to GSNO (A) or H2O2 (B). At least three experiments were performed, and the results of a representative experiment performed in triplicate are shown. The error bars indicate standard deviations.
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The resistance of the arcA mutant to ASN was also analyzed. However, no difference between the wild type and the arcA mutant could be consistently demonstrated in the ASN assay with sodium nitrite concentrations of 10 to 35 mM at pH 5.0.
arcA mutant of S. enterica serovar Enteritidis is not deficient in resistance against heat, salt, detergent, and acid. To determine the specificity of the increased susceptibility of the SE2473 arcA mutant to RNI/ROI, we determined the susceptibility of the S. enterica serovar Enteritidis arcA mutant to heat (52°C), salt (1 M NaCl), detergent (5% SDS), or acid (pH 4.0). No difference in survival or growth was detected between the arcA mutant and wild-type strain SE2472 under any of these conditions (Fig. 7).
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FIG. 7. ArcA mutation does not make S. enterica serovar Enteritidis susceptible to heat, detergent, salt, or low pH. Cultures of SE2472 (WT), the SE2472 arcA mutant (arcA-), and vector pRB3-273C- and plasmid pRB3arcA-transformed arcA mutant SE2472 (arcA-[pRB3-273C] and arcA-[pRB3arcA], respectively) were subjected to 52°C (A), 5% SDS (B), 1 M NaCl (C), or pH 4.0 in LB medium (D). Bacterial concentrations were determined by plating. The values are the concentrations of surviving bacteria after exposure to the stress conditions. At least two experiments were performed, and the results of a representative experiment performed in triplicate are shown. The error bars indicate standard deviations.
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We observed, however, that, while transformation of RNI-susceptible isolate SE8743 with a plasmid expressing arcA made it resistant to ASN, disruption of arcA in relatively RNI-resistant isolate SE2472 did not significantly affect its susceptibility to ASN, suggesting that arcA is not required for resistance of SE2472 to ASN. Instead, the arcA mutant of SE2472 became susceptible to GSNO, a donor of RNI products. Other workers have shown that GSNO mediates oxygen-independent cytostasis of S. enterica serovar Typhimurium and that another NO redox form, NO·, has no antimicrobial activity against this organism (11). Thus, Salmonella appears to exhibit different patterns of susceptibility to different redox forms of NO. The disruption of arcA in SE2472 may have affected a bacterial product that mediates resistance to the bacteriostatic redox form of NO generated by GSNO (presumably nitrosonium [NO+] [11]), whereas the susceptibility of SE8743 to ASN may be mediated by different NO redox forms that are overcome by the multicopy effect of arcA. It is also possible that the difference in the genetic backgrounds of SE8743 and SE2472 is responsible for the difference in susceptibility to ASN of SE8743 transformed with multicopy arcA and SE2472 disrupted in a singe copy of gene arcA.
ArcA is one component of the E. coli and Salmonella global control systems that respond to molecular oxygen, including the OxyR, SoxRS, Fnr, and ArcAB systems (2, 28, 31). Together with Fnr, ArcAB regulates anaerobic growth of E. coli. ArcA is the transcriptional regulator, and ArcB is a transmembrane protein that contains receiver and transmitter domains. Signals recognized by ArcB, thought to be membrane potential or metabolites generated during anaerobic growth, may activate the system (4, 20, 21, 2628). Recently, Georgellis et al. reported that the redox signals for the ArcAB system are quinones which are membrane-associated electron carriers (21). Anaerobic induction of ArcAB appears to be dependent on Fnr, which also regulates many of the ArcAB-regulated genes involved in cellular adaptation to anaerobic growth (31). Together, ArcAB and Fnr repress genes involved in aerobic metabolism, but ArcAB may also induce positive regulation of the cytochrome d oxidase operon (8, 31). The function of ArcA in aerobic growth has not been reported. Here we provide evidence for the first time that ArcA is important for RNI/ROI resistance under aerobic conditions.
In addition to ArcAB and Fnr, OxyR and SoxRS are the other major global control systems that regulate genes in response to oxidative stress. Both OxyR and SoxRS systems are also involved in resistance to RNI (14, 24, 34). SoxRS appears to be important for RNI resistance in E. coli but not in S. enterica serovar Typhimurium (19). Both OxyR and SoxR can be directly modified by S nitrosylation (14, 24). This report provides evidence for the first time that arcA of the ArcAB regulon is important for Salmonella resistance to nitrosative stress. In an anaerobic environment, nitrogen oxides can serve as electron acceptors. It would be interesting to determine whether expression or activity of the ArcAB system is induced by RNI and whether the sensor ArcB is modified by nitrosylation, as OxyR and SoxR are.
Although we found that arcA is necessary for resistance of S. enterica serovar Enteritidis to both nitrosative stress and oxidative stress in vitro, we did not detect significant attenuation of an arcA mutant S. enterica serovar Enteritidis strain in mice. It is possible that an arcA mutation is compensated for by other factors in vivo. As mentioned above, many of the ArcA-regulated genes are coregulated by the Fnr modulon. Since the RNI/ROI-susceptible arcA mutant strain of S. enterica serovar Enteritidis was able to kill mice in most of the experiments, we concluded that nitrosative and oxidative stresses in vivo are distinct from the stresses examined in vitro in this study or that other factors induced in vivo compensate for the susceptibility to stresses observed in vitro. The observation that an arcA mutant is not clearly attenuated in vivo is not entirely surprising. Two other global transcriptional regulators, OxyR and SoxS, have been shown to be nonessential for virulence of S. enterica serovar Typhimurium in vivo, even though both are essential for resistance to RNI or ROI in vitro (19, 39).
Since all S. enterica serovar Enteritidis isolates carry arcA and the sequence of this gene is the same in SE2472 (RNI/ROI resistant) and SE8743 (RNI/ROI susceptible), the relative RNI/ROI resistance of SE2472 compared to that of other clinical isolates cannot be attributed to this gene alone. Introduction of arcA on a multicopy plasmid was not sufficient for isolate SE8743 to become as resistant to ASN and hydrogen peroxide as SE2472, further indicating that other unidentified loci play a role. Nevertheless, our analyses showed that arcA is necessary for SE2472 to resist some redox forms of RNI, as well as ROI. In the future, it would be of interest to identify ArcA-regulated genes involved in RNI/ROI resistance. The arcA mutant which we constructed provides an opportunity to study such genes. It is becoming clear that the study of the role of global regulators in stress response and Salmonella pathogenesis requires detailed analyses of the interactions of all of these systems in vivo and of the overlapping regulation of the genes that they control.
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This study was supported by grant AI43032 to L.W.R.
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