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Infection and Immunity, January 2003, p. 181-186, Vol. 71, No. 1
0019-9567/03/$08.00+0 DOI: 10.1128/IAI.71.1.181-186.2003
Copyright © 2003, American Society for Microbiology. All Rights Reserved.
Gamaleya Research Institute of Epidemiology and Microbiology, Moscow 123098, Russia,1 CNR Anaerobies, Institut Pasteur, 75724 Paris, France,2 Department of Microbiology and Immunology, Northwestern University Medical School, Chicago, Illinois 606113
Received 2 August 2002/ Returned for modification 6 September 2002/ Accepted 3 October 2002
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It is well known that certain types of transferases are major virulence factors in some bacteria and represent the enzymatic components of toxins. For example, whereas diphtheria toxin of Corynebacterium diphtheriae, cholera toxin of Vibrio cholerae, and exotoxin A of Pseudomonas aeruginosa are ADP-ribosyltransferases, toxins A and B of Clostridium difficile and the lethal toxin of Clostridium sordellii are uridine diphospho (UDP)-glucosyltransferases (48). Interestingly, in the gram-negative pathogens, these toxic transferases can be dependent upon type II protein secretion, a system that, as noted above, is also critical for L. pneumophila pathogenesis (4, 43, 56). Whereas ADP-ribosyltransferases have been found in both extra- and intracellular pathogens, UDP-glucosyltransferase toxins have been studied only in extracellular pathogens (1, 37, 39). For these various reasons, our research has been aimed at identification of similar types of enzymes in Legionella cultures. In the present study, we characterized a novel product of L. pneumophila that possesses UDP-glucosyltransferase activity and modifies a distinct component of eukaryotic host cells.
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Protein purification and microsequencing. The L. pneumophila UDP-glucosyltransferase was purified from strain Philadelphia I. Bacterial cells from 100 BCYE agar plates were suspended in 20 ml of 20 mM Tris-HCl (pH 7.4)-150 mM NaCl (TBS), washed once by centrifugation (Sorvall, Newtown, Conn.) at 12,000 x g for 15 min (all centrifugation steps were performed at 4°C), and resuspended in 100 ml of TBS. The cell suspension was subjected to ultrasonication with five 1-min pulses with 2-min intervals between pulses at the high power setting (Techpan, Warsaw, Poland) on ice. Unbroken cells and cell wall fragments were pelleted by centrifugation at 18,000 x g for 60 min and discarded. The supernatant was treated with protamine sulfate (Sigma, St. Louis, Mo.) at a concentration of 2 mg/ml to sediment the majority of the bacterial DNA. After the sonicate was dialyzed overnight against 20 mM Tris-HCl (pH 7.4) (TB), it was loaded onto a Mono Q 10/10 anion-exchange column equilibrated with TB. The column was washed sequentially with TB and 0.05 M NaCl in TB, and fractions were tested for UDP-glucosyltransferase activity (see below). The enzymatically active preparation was then eluted with 20 ml of 0.1 M NaCl in TB. The eluate was dialyzed against 20 mM morpholineethanesulfonic acid (MES)-Na buffer (pH 6.25) (MB) and loaded onto a Mono S 5/5 cation-exchange column equilibrated with MB. The Mono S 5/5 column was then washed sequentially with MB, 0.05 M NaCl in MB, and 0.1 M NaCl in MB. The enzymatically active material was eluted with 3 ml of 0.15 M NaCl in MB. After the active samples were dialyzed against TB, they were loaded onto a Mono Q 5/5 anion-exchange column equilibrated with TB. Elution was performed with a linear 0.0 to 0.1 M NaCl gradient in TB. Active fractions, which eluted between 60 and 80 mM NaCl, were concentrated by ultrafiltration with a YM10 filter (Amicon, Danvers, Mass.) and subjected to gel chromatography on a TBS-equilibrated Superose 6 10/30 column, which was able to separate proteins having molecular masses ranging from 5 to 5,000 kDa. Fractions (0.4 ml) were collected, and the fractions with enzymatic activity, which eluted in a peak retention volume of 16.5 ml, were pooled and stored at -20°C as purified UDP-glucosyltransferase. All matrices used for liquid chromatography were obtained from Amersham Biosciences, Vienna, Austria. All chromatographic steps were done with the Amersham fast protein liquid chromatography system. Microsequencing of purified protein was performed at the Laboratory of Protein Microsequencing at the Institut Pasteur by standard procedures. In order to assay for UDP-glucosyltransferase activity in other strains of L. pneumophila or in other species of Legionella, crude ultrasonic extracts were prepared as described above for L. pneumophila Philadelphia I. Finally, in order to assay for a secreted UDP-glucosyltransferase activity, L. pneumophila Philadelphia I was grown in Proteose Peptone No. 3 (Difco, Detroit, Mich.) broth for 18 h at 37°C with constant shaking (200 rpm) (59). After centrifugation of the culture at 12, 000 x g for 15 min, the resultant supernatant was filter sterilized and concentrated 10-fold by using an Amicon YM10 filter.
PCR amplification and cloning of the UDP-glucosyltransferase gene.
Based on data from the L. pneumophila Philadelphia I genome project at Columbia University (http://genome3.cpmc.columbia.edu/
legion/ngnp1033033), two DNA primers were designed for amplification of the putative UDP-glucosyltransferase gene (IDT, Coralville, Iowa). The sequence of the sense primer was 5'-ATGGGAGACGAGTATGAATTCAGCAAGAAG-3' (an engineered EcoRI site is underlined), and the sequence of the antisense primer was 5'-TTCAAAATTTGTGTGTCGACATTAAGCTAC-3' (an engineered SalI site is underlined). The PCR was performed under standard conditions (i.e., denaturation at 94°C, annealing at 55°C, and elongation at 72°C) with a Sprint thermocycler (Hybaid, Ashford, England). Legionella genomic DNA for the PCR was extracted by the phenolic method (46). For cloning of the UDP-glucosyltransferase gene, the PCR product that was amplified from L. pneumophila Philadelphia I DNA was digested with EcoRI and SalI and ligated into similarly digested pET28b. E. coli BL21(DE3) was transformed with the resulting plasmid by electroporation by using an Electroporator 2510 (Eppendorf, Hamburg, Germany).
For purification of a recombinant enzyme, the E. coli clone was grown in Luria-Bertani broth supplemented with kanamycin for 3 h on a shaker at 37°C. Hyperexpression of the cloned protein was then induced by supplementing the culture with 0.5 mM isopropyl-ß-D-thiogalactopyranoside (IPTG) (Sigma) and incubating it for an additional 2 h. The bacterial cells from 100 ml of culture were harvested by centrifugation at 8,000 x g for 15 min, resuspended in 6 ml of TBS, and then lysed by ultrasonic treatment (three 20-s pulses with 1-min intervals between pulses at the medium power setting). Following clarification by centrifugation, the bacterial extract was subjected to chromatography on nickel-equilibrated chelating Sepharose Fast Flow (Amersham Biosciences) used according to the manufacturer's instructions. Purified recombinant UDP-glucosyltransferase was eluted with 0.5 M imidazole and desalted by using an FD10 column (Amersham Biosciences). Pure protein was stored at -20°C.
UDP-glucosyltransferase assay. Protein samples derived from Legionella strains were tested for the ability to UDP-glucosylate substrates contained in HeLa, THP-1, CHO, and Vero cells, which were obtained from the Pasteur Institut and the Gamaleya Research Institute. The various cell lines were grown in 250-ml culture flasks (Becton Dickinson, Oxnard, Calif.) containing RPMI 1640 medium supplemented with 10% fetal calf serum (Gibco Laboratories, Grand Island, N.Y.). After 3 to 4 days of growth at 37°C in the presence of 5% CO2, cells were scrapped from the plastic surfaces, washed, and resuspended in 2 ml of ice-cold TBS per culture flask. Cell extracts were prepared by ultrasonication, which involved a 5- to 7-s pulse at medium power. UDP-glucosyltransferase reactions were carried out by using mixtures consisting of 5 µl of reaction buffer (150 mM triethanolamine [pH 7.5], 6 mM MgCl2, 0.9 mM GDP, 3 mM dithiothreitol), 2 µl of [14C]UDP-glucose (code CFB102-10µCi; Amersham Biosciences), 5 µl of bacterial preparation at a protein concentration of 0.05 to 1.5 mg/ml, and 5 µl of eukaryotic cell ultrasonic extract at a protein concentration of 1 mg/ml. Each mixture was incubated at 37°C for 1 h, after which the reaction was stopped by adding Laemmli sample buffer and heating the mixture at 100°C for 5 min. The samples were then subjected to sodium dodecyl sulfate (SDS)-polyacrylamide gel electrophoresis (PAGE) by using 7% polyacrylamide stacking and 12% polyacrylamide resolving gels (28). After this, each gel was washed in 7% acetic acid, dried, and exposed to Hyperfilm (Amersham Biosciences) for 3 days at -70°C.
Immunoblot analysis and protein determination. Following SDS-PAGE (28), an immunoblot analysis was performed by using standard procedures (57), a 1/5,000 dilution of primary rabbit serum, and a 1/4,000 dilution of anti-rabbit horseradish conjugate (Bio-Rad, Moscow, Russia). For production of primary antiserum, 2- to 3-kg rabbits, obtained from the animal facility at the Gamaleya Research Institute, were immunized three times with 100 µg of native, purified UDP-glucosyltransferase in TBS at 2-week intervals. Ten days after the last injection, the rabbits were exsanguinated by sublethal cardiac puncture, and the resultant serum was stored. Protein concentrations were determined by a Coomassie brilliant blue R250 assay (Serva, Heidelberg, Germany) by using bovine serum albumin as a standard (10).
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FIG. 1. Identification of a new UDP-glucosyltransferase activity. Ultrasonic extracts from different Legionella species were incubated in the presence of HeLa cell extract and [14C]UDP-glucose. After this, the samples were subjected to SDS-PAGE, dried, and exposed to X-ray film. Lane 1, L. pneumophila Philadelphia I; lane 2, L. pneumophila 130b; lane 3, L. pneumophila ATCC 33823; lane 4, L. pneumophila ATCC 35096; lane 5, L. longbeachae ATCC 33462; lane 6, L. gormanii ATCC 33297; lane 7, L. steigerwaltii ATCC 35302; lane 8, L. pneumophila Philadelphia I without eukaryotic substrate; lane 9, HeLa cell extract without bacterial extract. The data represent data obtained in several experiments.
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FIG. 2. Identification of a substrate for L. pneumophila UDP-glucosyltransferase in different eukaryotic cell extracts. Ultrasonic extracts from the L. pneumophila Philadelphia I strain were incubated in the presence of HeLa (lane 1), Vero (lane 2), CHO (lane 3), and THP-1 (lane 4) cell preparations and [14C]UDP-glucose. After this, the samples were subjected to SDS-PAGE, dried, and exposed to X-ray film.
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FIG. 3. Purification of a UDP-glucosyltransferase from L. pneumophila. Samples were subjected to SDS-PAGE and stained with Coomassie brilliant blue R250. Lanes 1 and 5, molecular mass markers; (from top to bottom, 94, 67, 43, and 30 kDa; Amersham Biosciences); lanes 2 and 3, ultrasonic lysate of L. pneumophila Philadelphia I containing 30 and 15 µg of protein, respectively; lane 4, purified, 60-kDa UDP-glucosyltransferase (ca. 0.5 µg).
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FIG. 4. Enzymatic activity of UDP-glucosyltransferase purified from L. pneumophila and recombinant E. coli. Approximately 0.5 µg of purified native protein (lanes 1 and 3) or recombinant protein (lanes 2 and 4) was incubated in the presence of [14C]UDP-glucose with (lanes 1 and 2) or without (lanes 3 and 4) HeLa cell extract. After this, the samples were subjected to SDS-PAGE, dried, and exposed to X-ray film.
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legion/ngnp1033033). An open reading frame whose translated sequences matched the sequences of isolated peptides was found on contig CTG.BC.5E37D10.01.44.07280. The 1.57-kb gene, which had not yet been assigned a possible function, was predicted to encode a protein product with a molecular mass of 57.8 kDa, a size that was compatible with the size of the purified UDP-glucosyltransferase (i.e., ca. 60 kDa). There was an apparent discrepancy between the N-terminal sequences of the purified protein (DQQLSXLRMRFFSAL) and the translated gene product (MKARRDQQLSKLRMRFFSAL). The absence of the amino acid string MKARR in the sequenced protein might have resulted from posttranslational modification of the enzyme or from proteolytic degradation during storage or purification. BLASTX searches (cost to open gap, 11; expect value, 10) with the entire open reading frame sequence only retrieved hits possessing scores of less than 36 bits and E values of more than 1.1. These results demonstrated that there was a lack of overall homology between the Legionella protein and known proteins in the National Center for Biotechnology Information database (http://www.ncbi.nlm.nih.gov/blast/Blast.cgi). In order to determine whether the gene which we examined in fact encodes the L. pneumophila UDP-glucosyltransferase, we sought to clone it and test its protein product for activity in our HeLa cell extract assay. To do this, we utilized the pET28 expression system, which allows cloning of recombinant proteins in frame with an upstream polyhistidine tag and thereby permits protein purification by nickel affinity chromatography. Using PCR and primers based on sequences in the Legionella database, we amplified a 1.6-kb fragment from Philadelphia I genomic DNA (Fig. 5, lane 2). The PCR fragment was expected to contain the entire UDP-glucosyltransferase open reading frame plus 16 bp upstream and 29 bp downstream. By incorporating convenient restriction sites into the primers, the DNA fragment was easily cloned into pET28b, resulting in plasmid p28b-13. E. coli BL21(p28b-13) was confirmed by SDS-PAGE to express a considerable amount of the cloned gene product (Fig. 6). When tested in the UDP-glucosylation assay, the recombinant protein modified a substrate in a HeLa cell extract with the same molecular mass (45 kDa) as the substrate modified by the native enzyme (Fig. 4). These results confirm that the L. pneumophila gene encodes UDP-glucosyltransferase activity. We designated this gene ugt (UDP-glucosyltransferase). The ugt gene mapped between a putative heat shock protein gene and a predicted deaminase gene in the unfinished L. pneumophila genome project sequence. The previously described lspFGHIJK genes, which are associated with type II protein secretion (19, 43), were approximately 4 kb downstream of ugt. PCR analysis with the primers described above revealed that all L. pneumophila strains tested possessed a 1.6-kb ugt-containing fragment (Fig. 5). In contrast, representatives of L. longbeachae, L. gormanii, and L. steigerwaltii were negative in the PCR (Fig. 5).
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FIG. 5. PCR detection of the L. pneumophila UDP-glucosyltransferase gene. Based on nucleotide sequence data for L. pneumophila Philadelphia I, specific primers were used to PCR amplify DNA fragments from purified genomic preparations. Following amplification, the DNA mixtures were subjected to agarose gel electrophoresis and stained with ethidium bromide. Lane 1, molecular mass markers (from top to bottom, 10, 8, 6, 5, 4, 3, 2.5, 2, 1.5, 1 [threefold intensity], and 0.5 kb; Amersham Biosciences); lane 2, L. pneumophila Philadelphia I; lane 3, L. pneumophila 130b; lane 4, L. pneumophila ATCC 33823; lane 5, L. pneumophila ATCC 35096; lane 6, L. longbeachae ATCC 33462, lane 7, L. gormanii ATCC 33297; lane 8, L. steigerwaltii ATCC 35302.
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FIG. 6. SDS-PAGE analysis of recombinant L. pneumophila UDP-glucosyltransferase. Lane 1, crude lysate of E. coli BL21(p28b-13); lane 2, purified recombinant UDP-glucosyltransferase; lane 3, UDP-glucosyltransferase purified from L. pneumophila; lane 4, molecular mass markers (94, 67, 43, 30, 20, and 14 kDa). Because of its N-terminal polyhistidine tag, the recombinant enzyme migrated more slowly than the native enzyme.
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FIG. 7. Immunoblot analysis of different Legionella strains. Ultrasonic extracts were obtained from various legionellae grown on BCYE agar, and then samples containing approximately 5 µg of protein were subjected to SDS-PAGE, transferred onto a nitrocellulose filter, and probed with an antiserum raised against purified L. pneumophila UDP-glucosyltransferase. Lane 1, UDP-glucosyltransferase purified from L. pneumophila; lane 2, purified recombinant UDP-glucosyltransferase; lane 3, L. pneumophila Philadelphia I; lane 4, L. pneumophila 130b; lane 5, L. pneumophila ATCC 33823; lane 6, L. pneumophila ATCC 35096; lane 7, L. longbeachae ATCC 33462; lane 8, L. gormanii ATCC 33297; lane 9, L. steigerwaltii ATCC 35302. Minor bands observed in recombinant protein and some L. pneumophila preparations probably resulted from proteolytic degradation of a major 60-kDa enzyme.
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Given the different lifestyles of L. pneumophila, Ugt could serve any number of roles, including as a virulence determinant. In one scenario, the enzyme may promote intracellular infection of host cells. Such a hypothesis is supported by the fact the 45-kDa substrate was conserved within monocytes and epithelial cells, two types of cells that support L. pneumophila intracellular growth. In another scenario, Ugt may facilitate extracellular survival in the mammalian host and/or in natural aquatic environments. Two observations suggest that the Legionella UDP-glucosyltransferase may promote pathogenesis, participating in intracellular infection and/or extracellular survival. First, enzymatic activity and cross-reactive proteins appeared to be specific to L. pneumophila, the most pathogenic of the Legionella species. Second, UDP-glucosyltransferases can play critical roles in bacterial virulence. In the genus Clostridium, UDP-glucosyltransferases represent the enzymatic components of the so-called large clostridial toxins, which include toxins A and B of C. difficile, as well as the lethal and hemorrhagic toxins of C. sordellii (48). Another large clostridial toxin, the alpha-toxin of Clostridium novyi, uses UDP-N-acetylglucosamine instead of UDP-glucose as its cofactor (50). The 250- to 300-kDa clostridial toxins modify low-molecular-mass G proteins of the Rho and Ras subfamilies by attaching a sugar moiety to a threonine residue in the effector domain of the GTPase (1, 40, 50). The diseases caused by these clostridia have different clinical and epidemiological manifestations; C. difficile is an agent of antibiotic-associated diarrhea and pseudomembranous colitis in humans, C. sordellii produces gas gangrene, diarrhea, and enterotoxemia in humans and animals, and C. novyi causes gas gangrene in humans and animals (21, 31). However, a common feature of these diseases is that they all involve bacterial extracellular proliferation in the face of an inflammatory response (7). It has been speculated that inhibition of phagocytosis may result from the toxins' ability to target Ras-related proteins, which are important regulators of actin cytoskeleton rearrangements (1, 20, 32, 47). Indeed, the clostridial glucosyltransferases result in suppression of actin polymerization and rapid disorganization of the cytoskeleton network (1). Since the molecular masses of the Rho and Ras proteins are only 21 to 25 kDa (20), it is unlikely that the Legionella and Clostridium enzymes catalyze the same reaction. However, this does not preclude a role for Ugt in the cytoskeleton rearrangements or organelle trafficking alterations that are associated with L. pneumophila intracellular infection (55); e.g., there are multiple molecular mechanisms by which bacterial toxins influence the host cell cytoskeleton (40, 52). Thus, the L. pneumophila UDP-glucosyltransferase may promote pathogenesis by facilitating an intimate interaction with cells (e.g., macrophages) that is favorable for intracellular growth or by minimizing, as the clostridial toxins do, association with cells (e.g., polymorphonucleocytes) that are nonpermissive.
Clearly, future studies should include the generation of L. pneumophila mutants specifically defective for the glucosyltransferase and then an examination of their behavior in protozoan and mammalian models of intracellular infection, as well as in animal models of legionellosis. Any attenuation would indicate that the transferase enzyme has a role in virulence and definitely justify further identification of the eukaryotic substrates for the L. pneumophila transferase. Such investigations not only should shed light on the function of this enzyme in Legionella biology but also may increase our understanding of eukaryotic cell physiology. If the UDP-glucosyltransferase were implicated in infection, then we would also need to further investigate its locations in and/or processing by the bacterial cell. Although our data indicate that the enzyme is inside the Legionella cell, bacterial toxins can be cell associated and exhibit their pathogenic activity only after cell lysis (22, 26). Alternatively, it is conceivable that Ugt either is subject to type II secretion but only under certain growth conditions or is delivered into target cells by another specialized secretion apparatus, such as the Legionella type IV secretion system (19, 43, 49, 58). Another interesting question for possible future investigation is where and how Ugt is transported into host cells. Since the Legionella enzyme did not exhibit homology with the C-terminal, receptor-binding domain of the clostridial toxins, it may interact with host cell plasma membranes in a unique way. Alternately, it may be delivered into the host cell cytosol only after the bacteria have entered the replicative phagosome.
In summary, in this paper we describe the identification and cloning of a novel UDP-glucosyltransferase enzyme from L. pneumophila. Based on its apparently unique structure and the existence of a eukaryotic substrate, this enzyme may represent an important virulence factor of L. pneumophila. Additional study of this enzyme and its gene should yield new insights into the biochemistry of UDP-glucosyltransferases, the biology of a unique facultative intracellular parasite, and the pathogenesis of Legionnaires' disease.
This work was supported in part by NIH grant AI43987 awarded to N.P.C. and by a Regional Public Russian Medicine Support Fund grant awarded to I.B.
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-toxin-catalyzed incorporation of GlcNAc into Rho subfamily proteins. J. Biol. Chem. 41:25173-25177.
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