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Infection and Immunity, October 2003, p. 5962-5969, Vol. 71, No. 10
0019-9567/03/$08.00+0 DOI: 10.1128/IAI.71.10.5962-5969.2003
Copyright © 2003, American Society for Microbiology. All Rights Reserved.
Laboratory of Human Bacterial Pathogenesis, Rocky Mountain Laboratories, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Hamilton, Montana 59840,1 Veterinary Molecular Biology, Montana State University, Bozeman, Montana 59717,2 Department of Pathology, Baylor College of Medicine, Houston, Texas 770303
Received 30 April 2003/ Returned for modification 3 June 2003/ Accepted 7 July 2003
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Gram-negative bacterial pathogens assimilate iron or heme from host iron- or heme-protein complexes by using systems based on siderophores, hemophores, or specific receptors (13-15, 26). Siderophores (low-molecular-weight iron chelators) and hemophores (heme-binding proteins) are secreted by pathogens to sequester iron and heme from host proteins, respectively. Siderophore-iron or hemophore-heme complexes are taken up by an outer membrane receptor and transported across the outer and cytoplasmic membranes by a TonB-dependent process (20) and an ATP-binding cassette (ABC) transporter in gram-negative pathogens (16), respectively. Alternatively, iron or heme can be directly sequestered from host proteins by specific receptors on the surfaces of bacteria and brought across the cytoplasmic membrane by ABC transporters (15). Recent studies suggest that cell surface proteins and ABC transporters are involved in heme acquisition by gram-positive bacteria (23).
Streptococcus pyogenes, commonly referred to as group A streptococcus (GAS), is a gram-positive bacterial pathogen causing a variety of human diseases including pharyngitis, scarlet fever, necrotizing fasciitis, streptococcal toxic shock syndrome, and postinfection sequelae such as acute rheumatic fever, rheumatic heart disease, and glomerulonephritis (7). GAS can take up heme from hemoglobin and haptoglobin-hemoglobin complexes (11). Exogenously supplied heme or host heme proteins (hemoglobin, myoglobin, and catalase), but not iron-loaded transferrin and lactoferrin, support in vitro growth of GAS under iron-restricted conditions (9). However, little is known about the machinery for heme acquisition in GAS. Recently, a novel heme-associated cell surface protein (Shp) made by GAS was identified (21). The shp gene is cotranscribed with eight contiguous downstream genes (21), including spy1795 (designated htsA), spy1794 (htsB), and spy1793 (htsC), encoding a putative ABC transporter (designated heme transporter of S. pyogenes, or HtsABC). We report here the preparation, heme binding, and cell surface location of HtsA and its comparison in cation content, cell surface location, and gene transcription with MtsA and Spy0385, the lipoprotein components of two other putative iron acquisition ABC transporters of GAS.
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Bacterial strains and growth. GAS strain MGAS5005 (serotype M1) has been described previously and characterized extensively (17). GAS was grown in Todd-Hewitt broth (Difco Laboratories, Detroit, Mich.) supplemented with 0.2% yeast extract (THY). Iron-restricted conditions were achieved by treating THY with the chelating resin Chelex 100 (Sigma) and supplementing it with 60 µM MgCl2 (DTHYMg) or 0.4 mM (each) CaCl2, MgCl2, MnCl2, and ZnCl2 (DTHYM). Tryptose agar with 5% sheep blood (Becton Dickinson, Cockeysville, Md.) or brain heart infusion agar (Difco Laboratories) was used as the solid medium. Escherichia coli strains NovaBlue and BL21(DE3) (Novagen) were used for gene cloning and protein expression, respectively.
Gene cloning. The htsA (spy1795), mtsA (spy0453), and spy0385 genes were cloned from MGAS5005 by using vectors and primers summarized in Table 1. MtsA was expressed as a mature form without any tag in which the first amino acid residue of the mature protein, cysteine, was replaced by a glycine residue. HtsA and Spy0385 each had 11 amino acid residues (MHHHHHHLETMG) fused to the second amino acid residue of each mature protein. Therefore, all three proteins were expressed as unlipidated cytosolic proteins without secretion signal sequences. The cloned genes were sequenced to rule out spurious mutations.
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TABLE 1. Primers, vectors, cloning sites, and recombinant plasmids in gene cloning
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Protein purification. All solutions were buffered with 10 mM Tris-HCl (pH 8.0) (THCl). The cell paste described above was suspended in 70 ml of THCl and sonicated on ice for 15 min. The samples were centrifuged at 20,000 x g for 15 min to remove cell debris, and the lysate containing recombinant protein was collected. Dialysis was done against 3 liters of THCl at 4°C for 30 h with two buffer changes. Purified proteins were concentrated by (NH4)2SO4 precipitation at 70% of saturation, dialyzed against THCl, and stored at -20°C. All centrifugation was carried out at 20,000 x g for 15 min.
(i) Purification of MtsA. The cell lysate was loaded onto a 2.5- by 10-cm DEAE Sepharose column, and the column was washed with 50 ml of THCl. (NH4)2SO4 (21 g) was added to 100 ml of the flowthrough pool. The sample was centrifuged at 20,000 x g for 10 min, and the supernatant was loaded onto a 2.5- by 5-cm phenyl Sepharose column. The column was washed with 170 ml of 1.5 M (NH4)2SO4, and the protein was eluted with a 100-ml linear gradient of 1.5 to 1.0 M (NH4)2SO4. Fractions containing recombinant MtsA were pooled.
(ii) Purification of Spy0385. NaCl (4 g) was added to 70 ml of cell lysate. The sample was loaded onto a nickel-nitrilotriacetic acid agarose column (1 by 5 cm), the column was washed with 100 ml of 1 M NaCl in THCl, and the protein was eluted with a 50-ml gradient of 0 to 0.15 M imidizole in the 1 M NaCl solution. The protein obtained was dialyzed, loaded onto a 1.5- by 10-cm Q-Sepharose column, and eluted with THCl.
(iii)Purification of HtsA. Initial chromatography of HtsA using a nickel-nitrilotriacetic acid agarose column was carried out exactly as described above. The eluted protein was dialyzed, loaded onto a 1.5- by 10-cm Q-Sepharose column, and eluted with a 100-ml linear gradient of 0 to 0.2 M NaCl in THCl and then with 50 ml of 0.2 M NaCl in THCl.
Reconstitution of holo-HtsA. Holo-HtsA was reconstituted from heme and apo-HtsA present in the purified HtsA sample. HtsA (0.3 ml at 0.57 mM) was incubated with 0.6 mM heme in 100 mM Tris-HCl (pH 8.8) for 10 min, loaded onto a Sephadex G-25 column (0.5 by 30 cm), and eluted with THCl. HtsA without free heme was collected.
Determination of protein concentration and heme content.
Protein concentrations were determined with the modified Lowry protein assay kit purchased from Pierce (Rockford, Ill.) with bovine serum albumin as a standard (22). A pyridine hemochrome assay (12) was used to assess the existence and content of heme associated with HtsA. Purified or reconstituted HtsA in 750 ml of THCl was mixed with 175 ml of pyridine, 75 µl of 1 N NaOH, and about 2 mg of sodium hydrosulfite, and the optical spectrum was recorded immediately with an Ultraspec 4000 UV-visible spectrophotometer (Pharmacia). Heme content was determined by measuring the absorbance at 418 nm (
418, 191.5 mM-1 cm-1) (12).
Measurement of iron, manganese, and zinc by ICP-MS. Levels of iron, manganese, and zinc in HtsA, MtsA, and Spy0385 were determined by inductively coupled plasma mass spectrometry (ICP-MS) conducted by procedures described previously (21) using an HP4500 ICP-MS instrument equipped with an CETAC ASX-500 autosampler (Agilent Technologies, Palo Alto, Calif.). Multielement calibration standard-2A (Agilent Technologies), a certified standard, was used to generate calibration curves.
Analysis of gene transcription. Gene transcripts present in GAS grown in THY, DTHYM, DTHYMg, or heparinized human blood were assessed by real-time reverse transcription-PCR (RT-PCR) (TaqMan) analysis. GAS grown in THY, DTHYM, or DTHYMg were harvested at an OD600 of 0.2. Culture of GAS in human blood was carried out by inoculating 108 CFU of GAS per ml of fresh nonimmune blood and rotating tubes end to end at 37°C for 4 h. The GAS culture in blood was incubated with 3 volumes of RNAprotect Bacteria reagent (Qiagen, Valencia, Calif.) for 5 min at room temperature, and GAS bacteria were pelleted by centrifugation at 1,600 x g for 2 min. The harvested bacteria were immediately frozen in liquid nitrogen and kept at -80°C prior to RNA isolation. Total RNA was isolated as described previously (21). High RNA quality was confirmed spectrophotometrically with an Agilent 2100 Bioanalyzer and an RNA 6000 LabChip kit (Agilent Technologies).
TaqMan analysis was performed as previously described (5) with probes and primers specific for gyrA, htsA, mtsA, or spy0385 (listed in Table 2). Oligonucleotide probes were labeled at the 5' end with the reporter dye 5-carboxyfluorescein and at the 3' end with the quencher N,N',N'-tetramethyl-6-carboxyrhodamine. The RT-PCR mixture (25 µl) contained the TaqMan One-Step RT-PCR Master Mix reagents (Perkin-Elmer Applied Biosystems), 500 nM each gene-specific primer, 100 nM each probe, and 30 ng of total RNA template or known quantities of MGAS5005 genomic DNA as the standard. Triplicates of samples, standard, and controls were set up in a single 96-well plate for all four genes tested. Amplification and detection of specific products were performed with the ABI Prism 7700 sequence detection system (Perkin-Elmer Applied Biosystems) with a cycle profile of 1 cycle at 48°C for 30 min, 1 cycle at 95°C for 10 min, and 40 cycles at 95°C for 15 s and 60°C for 1 min. The critical threshold cycle (Ct) is defined as the cycle at which the fluorescence becomes detectable above background and is inversely proportional to the logarithm of the initial number of template molecules. A standard curve was plotted for each primer-probe set, with Ct values obtained from amplification of known quantities of MGAS5005 genomic DNA. The standard curves were used to transform Ct values to the relative number of DNA molecules. Control reactions that did not contain reverse transcriptase revealed no contamination of genomic DNA in any RNA sample.
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TABLE 2. Oligonucleotide primers and fluorescent probes used to quantitate cDNA
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FIG. 1. Chromosomal contexts of the 10-kb regions containing genes encoding three putative ABC transporters which may participate in iron acquisition in GAS. Red arrow, lipoprotein gene; blue arrow, ATP-binding protein gene; green arrow, permease gene; pink arrow, hypothetical protein of unknown function black arrow, protein with known or inferred function. Above each arrow is the spy number assigned to the corresponding ORF in the M1 genome sequence (10). (A) ORFs around the htsABC transporter. Known or inferred functions are as follows: shp, heme-binding protein; 1791 and 1790, transporter proteins with transmembrane and ATP-binding domains. (B) ORFs around the spy0386-to-spy0383 transporter. Inferred functions are as follows: 0388, UDP-MurNac-tripeptide synthetase; 0380, manganese-dependent inorganic pyrophosphatase; 0379, pyruvate-formate lyase activating enzyme. (C) ORFs around the mtsABC transporter. Inferred functions are as follows: 0447, 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; 0450, metal-dependent transcriptional regulator; 0457, peptidyl-prolyl cis-trans-isomerase.
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FIG. 2. Sodium dodecyl sulfate-polyacrylamide gel electrophoretic analysis of purified recombinant HtsA, Spy0385, and MtsA. The gel was stained with Coomassie brilliant blue.
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FIG. 3. HtsA binds heme. (A) UV-visible absorption spectrum of 50 µM HtsA in THCl. (B) Reductive spectra of pyridine hemochrome derived from HtsA (solid curve) and purified recombinant M. tuberculosis KatG (open circles) obtained as described in Materials and Methods. The spectra were normalized for comparison.
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FIG. 4. Reconstitution of holo-HtsA. Purified HtsA, 82% of which was in apo-HtsA form, was incubated with heme, and the protein was separated from free heme by gel filtration using a Sephadex G-25 column. Presented are the optical absorption spectra of the untreated (dashed curve) and treated (solid curve) HtsA samples, both at 10 µM. The absorption peak at 408 nm is the Soret absorption peak of the bound heme.
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FIG.5. Levels of iron, manganese, and zinc in purified Spy0385, MtsA, and HtsA proteins as measured by ICP-MS. Shown are concentrations of iron (A), manganese (B), and zinc (C) in buffer (THCl), Spy0385, MtsA, HtsA, and the negative-control protein Spy1294 (putative maltose/maltodextrin binding protein), each at 100 µM in the buffer.
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FIG.6. (A) Effects of growth conditions on transcription of the gyrA, htsA, mtsA, and spy0385 genes. TaqMan assays were carried out with RNA isolated from GAS grown to an OD600 of 0.2 in metal cation-replete THY (open bars), Fe3+-depleted and Ca2+-, Zn2+-, Mn2+-, and Mg2+-replete DTHYM (solid bars), or Fe3+-, Ca2+-, Zn2+-, and Mn2+-depleted DTHYMg (hatched bars). The mean copy number of each indicated gene transcript in 30 ng of total RNA is shown. Error bars, standard deviations. (B) TaqMan analysis of htsA, mtsA, and spy0385 transcription in GAS grown in THY (open bars) or heparinized human blood (solid bars). GAS bacteria were harvested from THY at an OD600 of 0.4 or from human blood after a 4-h incubation. Levels of gene transcripts were normalized to the level of the transcript derived from the gyrA gene. Data are means ± standard deviations of triplicate measurements.
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Cell surface expression of HtsA. Iron acquisition systems are targets of vaccine research for many pathogenic bacteria. Cell surface exposure and accessibility to specific antibodies is one of the criteria for a successful vaccine candidate. To narrow our focus in future studies on GAS vaccine development, we used flow cytometry analysis to determine if HtsA, MtsA, and Spy0385 are located on the GAS cell surface. Only the antibody specific for HtsA recognized protein on the GAS surface (Fig. 7), indicating that HtsA is surface exposed.
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FIG. 7. Assessment of cell surface location of HtsA (top), Spy0385 (center), and MtsA (bottom) by flow cytometry. MGAS5005 (serotype M1) cells harvested at an OD600 of 0.4 were treated with a specific rabbit polyclonal antibody (red histograms) or a control rabbit anti-Sla antibody (histograms with solid black lines), stained with a phycoerythrin-conjugated donkey anti-rabbit IgG secondary antibody (histograms with dotted lines), and analyzed by flow cytometry.
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Gram-negative pathogens transport heme across the outer membrane into the periplasmic space through outer membrane heme-sequestering receptors, and the transport requires TonB, ExbB, and ExbD (20), which presumably use the proton motive force of the cytoplasmic membrane to drive the transport (3). Gram-positive pathogens do not need the TonB system. However, cell surface proteins in addition to ABC transporters are involved in heme acquisition. For example, cell wall-anchored proteins are part of the heme acquisition machinery in Staphylococcus aureus (23). A streptococcal cell surface heme-binding protein, Shp, has also been identified (21). The shp gene is cotranscribed with eight downstream genes (21), including htsABC. Subsequently, Bates et al. (1) reported that shr, the ORF immediately upstream of shp, is also cotranscribed with shp and that recombinant Shr and HtsA (which they named SiaA) can bind hemoglobin. HtsA is localized on the cell surface. HtsA could bind host hemoproteins as a receptor, as proposed by Bates et al. (1), to sequester heme from the bound hemoproteins and deliver heme to the permease HtsB. Heme in host proteins could be extracted by Shp and Shr and relayed to HtsA. We are currently in the process of investigating whether Shp and HtsABC are essential for heme acquisition in GAS and elucidating the molecular mechanism of the heme acquisition process.
The transcription of mtsA, spy0385, and especially htsA is up-regulated under metal cation-depleted conditions, suggesting their roles in the acquisition of iron and/or other metal cations. The transcription of these genes is apparently regulated by different unknown transcription regulators. Metal cation-restricted conditions up-regulated the transcription of all three genes. Iron-depleted and Ca2+-, Zn2+-, Mn2+-, and Mg2+-replete conditions dramatically depressed mtsA transcription, while completely and partially abolishing, respectively, the up-regulation of htsA and spy0385 transcription induced under metal cation-depleted conditions. Furthermore, the transcription of htsA and that of spy0385 responded differently when growth conditions were changed to human blood from THY. Our results also suggest that the unknown transcription regulators belong to an integrated network coordinately responding to the levels of various metal cations. We are currently in the process of identifying the metal ion(s) responsible for depressing mtsA transcription and reversing the up-regulation of htsA transcription induced under metal cation-depleted conditions in an effort to reveal the network regulating the transcription of htsA, mtsA, and spy0385.
ICP-MS analysis confirmed the finding of Janulczyk et al. (18) that MtsA binds Zn2+ and Fe3+. In addition, we detected the binding of Mn2+ by MtsA. It should be noted that MtsA shares 76.3 and 75.2% amino acid sequence identities with the lipoprotein components PsaA (GenBank accession no. AF459738) and ScaA (GenBank accession no. L11577) of manganese transporters in Streptococcus pneumoniae and Streptococcus gordonii, respectively. As discussed above, mtsA transcription was down-regulated under iron-depleted conditions. Our findings support the idea that MtsABC transports a cation other than iron under physiological conditions (4). Surprisingly, recombinant Spy0385 did not bind Fe, Zn, or Mn ions. Since iron-restricted conditions enhance spy0385 transcription, the Spy0383-to-Spy0386 transporter is likely involved in iron acquisition but is unlikely to target free Fe3+. Our preliminary data suggest that Spy0385 binds ferrichrome, implying that Spy0383 to Spy0386 may be involved in the acquisition of ferrisiderophore complexes. Although GAS is not known to produce siderophores, and GAS genomes (2, 10, 27) do not have homologues of siderophore production systems, GAS could use the Spy0383-to-Spy0386 transporter to acquire iron by using siderophores produced by other bacteria in the pharynx, the most common site of GAS infection. The iron level in HtsA was similar to the heme content, consistent with the conclusion that HtsA binds heme. GAS is a hemolytic pathogen causing acute inflammatory infections, and hemoproteins released from host cells by GAS should be abundant at both noninvasive and invasive infection sites. In vitro studies indicate that heme or hemoproteins, but not iron-loaded transferrin, support in vitro GAS growth under iron-depleted conditions (9). Taken together, heme is likely the most important iron source for GAS in vivo, and thus, HtsABC is likely an important ABC transporter for iron acquisition in GAS.
There are several indications from the results of flow cytometric analysis that HtsA, but not MtsA or Spy0385, is accessible to specific antibodies. HtsA is cell surface exposed, whereas MtsA and Spy0385 may be buried inside the cell wall. The possible location of these proteins inside the cell wall may be dictated by their substrates. The substrates of MtsA and Spy0385 may be small enough to diffuse freely inside the cell wall, whereas heme, the substrate of HtsA, is usually in complexes with host proteins or extracted from host proteins by GAS cell surface proteins, and cell surface exposure of HtsA may be essential for the acquisition of heme from host and/or GAS hemoproteins. PsaA and ScaA are suggested to be adhesins (19). Due to limited exposure on the cell surface, MtsA, which is homologous to PsaA and ScaA, may not function as an adhesin. If HtsABC is crucial for iron acquisition and virulence in GAS, HtsA may be a vaccine candidate.
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