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Infection and Immunity, October 2005, p. 6472-6478, Vol. 73, No. 10
0019-9567/05/$08.00+0 doi:10.1128/IAI.73.10.6472-6478.2005
Copyright © 2005, American Society for Microbiology. All Rights Reserved.
Department of Microbiology and Immunology, University of Texas Health Science Center at San Antonio, San Antonio, Texas
Received 20 April 2005/ Returned for modification 31 May 2005/ Accepted 16 June 2005
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-actinin was shown to be overexpressed in amoeboid parasites compared to batch-cultured ellipsoid trichomonads (1). The transcriptional regulation of parasite genes in response to interactions with host cells using in vitro models has been studied in Neisseria meningitides (23), Porphyromonas gingivalis (25, 41), and Helicobacter pylori (26). Due to the lack of a good animal model system to study T. vaginalis pathogenesis, we have used an in vitro model of immortalized human VECs (22) in our present study. Because of the unavailability of genome sequence data at the time this study was initiated, we used the subtraction cDNA library approach to identify the transcriptional changes in gene expression during the initial step of T. vaginalis attachment to VECs. Differentially expressed gene profiling using cDNA subtraction has been an ideal tool in identifying novel genes and transcripts of low abundance (13). Our data identify numerous T. vaginalis genes that are up-regulated upon contact, which was confirmed by semiquantitative reverse transcription-PCR (RT-PCR) and protein immunoblot analyses. We believe that functional analyses of up-regulated genes of both VECs, as done recently (29), and of the organisms after the adherence event will contribute to our understanding of the host-pathogen interrelationship and the elucidation of the mechanisms of pathogenesis.
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Isolation of total RNA. The MS-74 VECs were used for adherence as recently detailed (22). Briefly, 6 x 105 VECs were seeded onto T75 culture flasks and allowed to form a monolayer for 2 days. VECs were then washed with a medium mixture of Dulbecco's modified Eagle's medium-TYM (2:1, vol/vol) without serum. Parasites at the mid-logarithmic phase of growth were added to the MS-74 monolayer at a parasite-VEC ratio of 10:1 and incubated at 37°C to allow for parasite adherence. Parasites were incubated with the VECs for 30 min, and nonadherent parasites were removed by aspiration. The monolayer with adherent parasites was further incubated for 2 h until the monolayer was completely lysed. The parasites after interaction with the monolayer are referred to as primed parasites. Total RNA from control and primed parasites after contact with VECs was isolated using Trizol reagent (Invitrogen).
Construction of subtraction cDNA library. The cDNA from primed (tester cDNA) and control (driver cDNA) parasites was prepared using a cDNA synthesis system (Roche Diagnostics Inc.). Briefly, 2 µg of total RNA was reverse transcribed using an oligo(dT)15 primer and avian myeloblastosis virus reverse transcriptase according to the manufacturer's protocol. The subtractive cDNA library was constructed according to the standard protocol (52). Briefly, each set of cDNA was digested with AluI and RsaI to generate shorter, blunt-ended cDNA fragments. The tester DNA and driver DNA were ligated with different sets of adaptors. Ligated cDNA was amplified by PCR using the adaptor primers to obtain large amounts of cDNA. The tester cDNA was labeled with [32P]dCTP, and the driver cDNA was biotinylated using 0.5 mM bio-11-dUTP (Biotium Inc.). A first hybridization between an excess of driver and tester was carried out to enrich the differentially expressed sequences. Tester/driver and driver/driver hybrids and biotinylated single-stranded driver cDNA were removed by addition of streptavidin and extraction with phenol-chloroform. The percentage of tester cDNA removed was determined by the radioactive counts remaining after phenol-chloroform extraction. Further rounds of subtraction were performed using the cDNAs from the previous round as a template for PCR synthesis of tester and driver cDNAs. After 10 rounds of alternating long and short hybridizations, the subtracted cDNA fraction was cloned into a TA vector and transformed into Escherichia coli to create a primed T. vaginalis (pTv) cDNA library.
PCR analysis of the subtraction efficiency.
PCR was performed on subtracted and unsubtracted cDNA with
-tubulin primers (Table 1) as an internal control. Each reaction was amplified for 30 cycles, and 5-µl aliquots were removed after 15, 20, and 25 cycles. The PCR products were electrophoresed on 1% agarose gels followed by staining with ethidium bromide (EtBr). The efficiency of subtraction was reflected by the difference in the number of cycles required for equal amplification of the PCR product in subtracted and unsubtracted samples.
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TABLE 1. Primers used for RT-PCR analyses
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RT-PCR analysis of selected genes.
Differential expression of a subset of cloned genes was confirmed by semiquantitative RT-PCR. Total RNA from control nonprimed and primed parasites was reverse transcribed with the oligo(dT)15 primer using Superscript II reverse transcriptase (Invitrogen), according to the manufacturer's protocol. PCR amplification of cDNA was carried out using gene-specific primers (Table 1). The trichomonad
-tubulin gene was used as an internal control. RT-PCR from iron-depleted and iron-replete organisms was also performed as explained above. Twenty-five cycles were used for amplification of specific genes (see Fig. 2), except for the protein disulfide isomerase (PDI) gene, which was amplified for 35 cycles because of its low levels of expression. As a control, all reactions were spiked with a known amount of human DNA, and RT-PCR was performed using
-tubulin primers. This assured the abundance of PCR product detected under these experimental conditions with the known primers. In addition, all RNA samples without reverse transcription were also used for PCR to detect genomic DNA contamination, if any. PCR products were visualized on EtBr-stained agarose gels, and the band intensity was quantitated using the Scion image beta program. The PCRs were carried out at four different times to verify the reproducibility of results. The result from one of the experiments is used for the data presentation.
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FIG. 2. Representative experiment showing confirmation of gene expression patterns in primed (pTv) and control (T. vaginalis [Tv]) parasites by semiquantitative RT-PCR analyses. Total RNA from pTv and T. vaginalis was isolated as detailed in Materials and Methods. RNA was reverse transcribed using oligo(dT) primer, and PCR was performed using gene-specific primers (Table 1). (A) RT-PCR products separated on EtBr-stained gels after electrophoresis in 2% agarose. (B) Gene expression pattern relative to the housekeeping trichomonad -tubulin gene used as a control. The values were obtained by scanning the intensities of bands from pictures of the gels in A using the Scion image beta program. The expression for each gene was relative to baseline density for -tubulin plotted on the graph. This experiment was repeated on four separate occasions with similar results.
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-actinin.
Hybridomas producing monoclonal antibodies (MAbs) against the
-actinin protein were obtained using standard protocols, as we have described previously (4). The MAb HA423 was identified by screening supernatants of antibody-producing hybridomas with different preparations of high-Mr protein antigens eluted from acrylamide gels after sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and using anti-mouse immunoglobulin G followed by alkaline phosphatase-conjugated goat anti-mouse immunoglobulin G. After subsequent single-cell cloning, the hybridomas were then reacted with E. coli expressing the recombinant protein from the full-length
-actinin gene (1).
SDS-PAGE and immunoblotting.
Lysates from identical numbers of control and primed parasites were separated by 10% SDS-PAGE, and the proteins were blotted onto nitrocellulose membranes (Bio-Rad, Hercules, CA). The nitrocellulose blots were then incubated in a solution containing 0.1% Tween 20 and 5% bovine serum albumin prior to probing with the MAbs F5, DM116, and HA423, specific for adhesin protein 33 (AP33), AP65, and anti-
-actinin, respectively, at a dilution of hybridoma supernatant of 1:1,000. As a protein loading control, an identical blot was probed with human
-tubulin MAb clone B512 (Sigma, St. Louis, MO) at a dilution of 1:50. The blots were further incubated with goat anti-mouse secondary antibody (1:1,500 final dilution) conjugated with horseradish peroxidase (Bio-Rad). The blots were washed well and incubated in horseradish peroxidase substrate (Bio-Rad) to visualize the reactive band.
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200 bp. The subtraction efficiency was estimated by comparing the abundance of a known gene prior to and after subtraction. We amplified the T. vaginalis
-tubulin housekeeping gene as a control from subtracted and unsubtracted cDNA. Figure 1B shows that the PCR product for
-tubulin is detectable only after
25 cycles in the subtracted sample, while it is readily detectable after
15 cycles in the unsubtracted sample, indicating successful subtraction efficiency.
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FIG. 1. RNA isolation and PCR analysis of subtraction efficiency. (A) Total RNA was isolated from primed parasites after contact with VECs (pTv) and control organisms handled identically (T. vaginalis [Tv]). Total RNA (3 µg) was separated on a 1.2% agarose gel followed by staining with EtBr to visualize the purity and assess degradation of RNA. 28S and 18S refer to the rRNA bands of the VECs and the parasites. (B) PCR using -tubulin primers was performed on unsubtracted and subtracted cDNAs. Aliquots (5 µl) were removed at a predetermined number of cycles and analyzed by EtBr-stained gels after electrophoresis in 1.2% agarose. The -tubulin product appeared only after 25 cycles in the subtracted sample compared to 15 cycles in the unsubtracted sample.
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-actinin, and enolase. A putative PDI gene, a phospoglucomutase family protein involved in glucose metabolism, and a conserved GTP-binding protein (GTP-BP) were up-regulated. Genes involved in transcription and protein translation in addition to six genes with unknown functions were also elevated in expression. The identification of adhesin genes in the subtraction library validates the increased amounts of adhesins after adherence (8, 22). |
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TABLE 2. Genes upregulated in T. vaginalis upon early stages of cytoadherence to MS-74 VECs
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-actinin, GTP-BP, and PDI genes based on a possible role in adherence and the functional role played by these enzymes in other organisms. RT-PCR products of the selected genes were separated and visualized on ethidium bromide-stained gels, and as shown in Fig. 2A, band intensities were greater in PCR products from primed parasites compared to those of controls. Furthermore, the bar graph in Fig. 2B illustrates the higher levels of increased expression for these genes relative to
-tubulin, as quantitated by the Scion image beta program. Compared to unprimed control RT-PCR products, the range of increased expression varied from twofold (
-actinin) to sevenfold (PDI). These data reaffirm the up-regulation of genes identified by the subtraction library.
Verification of protein expression of up-regulated genes.
We felt that it was important to verify elevated levels of transcription with amounts of those proteins where MAbs were available. Figure 3 shows that MAbs F5, DM116, and HA423 against AP33, AP65, and
-actinin, respectively, readily detected each corresponding protein on nitrocellulose blots containing total proteins of control unprimed versus primed T. vaginalis parasites. Increased amounts of proteins based on the intensities of the bands for identical numbers of parasites loaded onto gels were obtained for the primed trichomonads. As an additional control, MAb that was reactive to the trichomonad
-tubulin was used similarly, and identical intensities of protein bands were obtained for control and primed parasites, indicating specific upregulation of expression of AP33, AP65, and
-actinin upon contact. Negative control experiments were performed on duplicate nitrocellulose blots using secondary antibody alone and were unreactive with any trichomonad proteins. These data suggest that signaling of parasites upon contact with VECs is evidenced by increased transcription of genes and corresponding translation of transcripts to protein.
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FIG. 3. Detection of protein expression in T. vaginalis upon adherence to VECs. Cell lysates were prepared from equivalent numbers of primed (pTv) and control (T. vaginalis [Tv]) parasites prior to SDS-PAGE and blotting onto nitrocellulose membranes, as described in Materials and Methods. Quadruplicate blots were probed with the MAbs F5, DM116, HA423, and B512, specific for AP33, AP65, -actinin, and -tubulin, respectively. The numbers indicated on the left-hand side are the molecular mass standards. A negative control without MAb and with only secondary antibody was always nonreactive in duplicate blots (data not shown).
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-tubulin gene and the GTP-binding protein remained unaltered, although the gene for GTP-binding protein was expressed at higher levels above
-tubulin. Interestingly, the
-actinin gene had a 60% higher level of expression based on the amount of transcript in low-iron-grown parasites than those of normal or high-iron organisms (Fig. 4B). Last, the amounts of transcript for PDI were decreased when trichomonads were grown in high-iron medium. These results reinforce the idea of multiple signaling and/or regulatory pathways influencing the expression of genes induced by contact of organisms with host cells.
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FIG. 4. Representative experiment showing the effect of iron on regulation of selected genes. Total RNA from parasites grown in normal TYM medium (N), iron-depleted medium (L), and iron-replete medium (H) was used in RT-PCR. (A) PCR products were separated on 2% agarose gels for visualization after EtBr staining. (B) Bar graph plotted using the relative values of band intensity obtained by Scion image beta scanning. Again, all values were normalized to the band intensity of -tubulin as a control. This experiment was repeated on four separate occasions with similar results.
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-actinin, which is known to have enhanced expression in the amoeboid forms of trichomonads (1). We also picked up two clones of the poorly characterized T. vaginalis enolase gene. Importantly, recent studies have shown that enolase has functional diversity and is a plasminogen-binding protein in other pathogenic organisms, including Fasciola hepatica (12), Streptococcus spp. (11, 39), and Staphylococcus aureus (34). In addition, enolase acts as a spreading factor during tissue invasion of group A streptococci (40). Of particular interest to us will be future localization and functional analyses of the trichomonad enolase to determine whether there is an alternative, nonenzymatic role, if any, in surface expression and parasite adherence. The fact that the gene for GTP-binding protein was also up-regulated indicates an important role for this gene product during early events of infection. GTP-binding protein is mainly involved in the endocytic and vacuolar protein-sorting pathways (47) in higher eukaryotes and also is involved in signal transduction pathways (15). As both signaling and compartmentalization of adhesins are mediated by contact and iron (8, 22, 32), it is conceivable that this GTP-binding protein may likewise play an essential role in adherence.
Moreover, the finding that PDI was up-regulated in expression may be noteworthy, given the important function of these proteins in the complex processes of protein folding for biological functions (28). Little is known about protein folding in T. vaginalis, and, although speculative, it is likely that trafficking, compartmentalization, and surface placement of adhesins may require proteins such as PDI. It has been proposed that PDIs confer protection as an important survival mechanism against oxidative stress and a denaturing environment for F. hepatica (45) and Giardia lamblia (28). Equally noteworthy are the chaperone and nonchaperone activities of PDIs in addition to the disulfide bond isomerization. Our finding, therefore, highlights the possibly critical role of these multifunctional PDI proteins in initial steps of colonization. Finally, the fact that genes with unknown functions specific for T. vaginalis respond to parasite contact with VECs perhaps highlights the importance of these proteins both in the property of adherence and in pathogenesis. These findings make evident the need for structure-function characterization of these novel virulence factors heretofore not identified previously.
The finding that the genes for AP65, AP33,
-actinin, GTP-BP, and PDI were up-regulated in expression was consistent with the relative abundance of the clones in the subtraction library, and indeed, AP65, AP33, and
-actinin also had increased amounts of protein. The coordinated up-regulation of
-actinin with the adhesin genes is not surprising given the involvement of
-actinin in cytoskeletal rearrangements for transformation from ellipsoid to amoeboid forms and for recruitment and surface placement of adhesins following contact (1).
In the vagina, the menstrual cycle likely plays a role in modulating the availability of iron sources and other nutrients (14) essential for optimal parasite viability and colonization (5, 33, 42-44). Despite the fact that both high- and low-iron environments are found in the vagina (31), most trichomonads during infection are high iron (2, 3). Accordingly and not surprisingly, an iron-responsive promoter element regulating the expression of the prominent AP65 adhesin gene of T. vaginalis has been characterized previously (50). While the AP65 and AP33 genes had increased amounts of mRNA for parasites grown in high-iron medium (6, 21, 37), it was previously hypothesized that the increased synthesis of adhesins by parasites after attachment may be due to utilization of intracellular iron pools (7). Alternatively, the data may indicate the possibility of two distinct signaling pathways for up-regulation of expression of genes, i.e., iron and contact. The fact that the
-actinin gene had elevated amounts of transcript for low-iron trichomonads is also consistent with the notion of at least two signaling pathways modulating
-actinin gene expression (1, 7). Given the role of
-actinin in maintenance of the amoeboid form during adherence to VECs, it is conceivable that a dual signaling system for increased expression of
-actinin permits sustained adherence when organisms are in a low-iron niche. In this scenario, trichomonads are unable to synthesize new adhesins because of low iron yet retain the amoeboid morphology for maximum surface interaction and utilize existing adhesins for optimal attachment to VECs. In contrast, PDI had decreased amounts of transcript when organisms were grown in high-iron medium. To our knowledge, there are no reports of such regulation of PDI in other systems (28, 45). It is possible that this reduction in amounts of transcript may be a posttranscriptional event regulated in part by iron. Furthermore, since PDI is a highly stable protein with a half-life of approximately 7 days in rat liver (38), the decreased transcript amounts may not be problematic for PDI-mediated protein folding and other functions. The fact that GTP-binding protein remained unaltered under all the conditions tested may indicate a need for steady-state levels of this protein at all times to ensure the proper sorting and compartmentalization of proteins (47) regardless of environmental cues.
Collectively, these results indicate that there are different mechanisms of gene regulation for parasites in the complex, constantly changing environment of the vagina (14). That the gene regulation patterns are altered to achieve optimal host parasitism regardless of external stimuli represents a theme of the T. vaginalis organisms (2, 3, 5, 8, 17, 18, 31, 32). In conclusion, we have identified a set of known and unknown parasite genes that are up-regulated after contact with host cells. Although the functional role of some of these gene products in terms of parasite adherence and pathogenesis remains to be determined, we feel that identification of both parasite and VEC-induced genes (29) after a crucial step preparatory for successful infection will help us elucidate and understand the complex host-parasite interrelationship.
Members of the laboratory are acknowledged for their suggestions and discussion of our work. The excellent assistance by Leo Chang is acknowledged for work involving the monoclonal antibodies, especially the new MAb against
-actinin.
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-Enolase of Streptococcus pneumoniae is a plasmin(ogen)-binding protein displayed on the bacterial cell surface. Mol. Microbiol. 40:1273-1287.[CrossRef][Medline]
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