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Infection and Immunity, December 2005, p. 7938-7945, Vol. 73, No. 12
0019-9567/05/$08.00+0 doi:10.1128/IAI.73.12.7938-7945.2005
Copyright © 2005, American Society for Microbiology. All Rights Reserved.
Medical College of Wisconsin, Department of Microbiology and Molecular Genetics, 8701 Watertown Plank Road, Milwaukee, Wisconsin 53226
Received 26 May 2005/ Returned for modification 12 July 2005/ Accepted 30 August 2005
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Differential intracellular localization of several Yersinia type III cytotoxins within mammalian cells has been reported. YopM localizes to the nucleus and stimulates the activity of PRK2 and RSK1 kinases (27, 34). YopH localizes to the focal adhesion complexes, which is essential for antiphagocytosis and virulence (17). YopE is a type III cytotoxin and a RhoGAP for Rho, Rac, and Cdc42 (5, 36). Rho and Rac appear to be preferred intracellular targets, since transfection of cells with the dominant active RhoV14 inhibited actin reorganization which leads to cell rounding, while transfection with the dominant active RacV12 inhibited antiphagocytic activity of YopE. YopE localizes within both the cytosol (12) and the perinuclear region of cultured cells (33).
Type III-delivered ExoS localizes to intracellular membranes within cultured cells (29) through the action of the first 107 amino acids of ExoS. When a green fluorescent protein (GFP) fusion reporter system was used to measure targeting to the perinuclear region of cultured cells, residues 51 to 72 of ExoS were observed to constitute a membrane localization domain (MLD), which was necessary and sufficient to localize the reporter within cultured cells (28). Deletion of the MLD did not inhibit type III secretion from P. aeruginosa. However, MLD-deleted ExoS (ExoS
MLD) localized in the cytosol, rather than being membrane associated. The type III secreted ExoS
MLD stimulated cell rounding and expressed ADP-ribosyltransferase activity but had a limited ability to ADP-ribosylate intracellular Ras GTPases (28). This indicated that membrane localization influenced the intracellular host proteins that were ADP-ribosylated by ExoS. The present study describes a leucine-rich motif within the MLD that targets ExoS to the Golgi-endoplasmic reticulum region of mammalian cells.
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Bacterial strains and reagents.
P. aeruginosa strain PA103 (
exoU exoT::Tc) with a pUCP derivative to express the indicated form of ExoS was cultured as described previously (2, 21, 26).
Construction of expression vectors.
Mammalian expression plasmids encoding the indicated regions of ExoS fused to GFP [ExoS(51-66)/GFP, ExoS(51-72)/GFP, and ExoS(1-107)/GFP] were engineered as previously described (21, 22). Mammalian expression plasmids encoding ExoS(62-77)/GFP, ExoS(51-77)/GFP, and ExoS(51-77)DiL
4N were engineered by amplification, using pExoS-HA as a template. Products were digested with EcoRI and BamHI, and the digested products were subcloned into pEGFP-N1 (Clontech, Palo Alto, CA). EcoRI-BamHI fragments in pEGFP-N1 were sequenced to confirm the open reading frame. Mammalian expression plasmids for ExoS(57-77), ExoS(51-72)2RD
3N, ExoS(51-72)4L
4N, ExoS(51-72)4L
4S, ExoS(51-66)L53Q, ExoS(51-66)L54Q, ExoS(51-66)L57Q, and ExoS(51-66)L61Q were engineered by annealing the complementary oligonucleotides with the indicated restriction sites and subcloned into the pEGFP-N1 vector. ExoS(MLD 4L
4N) (BglII/KpnI) and ExoS(MLD 2RD
3N) (BglII/KpnI) were subcloned into pUCPExoS(
MLD) (Table 1).
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TABLE 1. ExoS constructs generated in this studya
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Transfection and cellular fractionation of HeLa cells.
HeLa cells (85-mm dishes) were grown to
70% confluence and transfected with Lipofectamine Plus using 1 µg of the indicated DNA (16). After 18 to 24 h, transfected cells were washed twice with phosphate-buffered saline (PBS), harvested in 10 ml homogenization buffer (HB1) (250 mM sucrose, 3 mM imidazole, pH 7.4), pelleted at 1,000 rpm for 5 min, washed in 300 µl of HB1, suspended in 300 µl of HB2 (HB1 plus 1% mammalian protease inhibitor mixture set III [Sigma, St. Louis, MO], and 0.5 mM EDTA). Cells were lysed by passage 20 times through a 25-gauge needle. The whole-cell lysate was centrifuged for 5 min at 2,000 rpm in a microcentrifuge at 4°C, and the pellet (nuclei and unbroken cells) and postnuclear supernatant (PNS) were collected. The PNS was centrifuged for 30 min at 100,000 x g, and the pellet (membrane) and supernatant (cytosol) were collected. Samples were normalized to volume equivalent with sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) sample buffer, boiled, and stored at 20°C.
P. aeruginosa secretion analysis.
P. aeruginosa PA103 (
exoU exoT::Tc) containing the indicated plasmid was cultured for 4 h to reach an optical density of approximately 4 to 5 in TBSD containing nitrilotriacetic acid (NTA) (23). Bacteria were pelleted in a refrigerated microcentrifuge for 30 min, and secreted material (supernatant fluid) was precipitated with ammonium sulfate (65%) overnight at 4°C. The precipitate was collected by centrifugation, suspended in SDS-PAGE sample buffer, and subjected to SDS-PAGE.
Tetanolysin analysis of intracellular proteins that are ADP-ribosylated by type III secreted ExoS.
Stock cultures of P. aeruginosa were cultured overnight on plates with 400 µg of carbenicillin/ml, to select for plasmid maintenance. The next morning bacteria were suspended in tissue culture media and normalized spectrophotometrically, using 1 A540 unit to equal 8 x 106 bacteria/ml. HeLa cells were infected at a multiplicity of infection (MOI) of 8:1 (bacteria to cells) and at the first indication of cell rounding (typically 3 to 3:30 h) were permeabilized with tetanolysin (List Biologicals, Campbell, CA) using a procedure adapted from the work of Ahnert-Hilger et al. (1). P. aeruginosa-infected HeLa cells (six-well plate) were washed with PBS at room temperature and incubated in 2 ml total of cold HG1 buffer [20 mM PIPES, 2 mM Na+-ATP, 4.8 mM Mg(CH3COO)2, 150 mM potassium glutamate, 2 mM EGTA, 1 mM dithiothreitol, and KOH to obtain pH 7.0] with 0.8 µg tetanolysin for 15 min on ice and washed with cold HG1 buffer. Next, 2 ml of HG1 buffer containing 20 nM ([32P]adenylate phosphate)-NAD (10 µCi) was added, and cells were incubated for 40 min at 37°C in 5% CO2. Cells were washed in PBS, lysed with the addition of 100 µl of SDS-PAGE sample buffer, and subjected to SDS-PAGE. In estimating the amount of cell-associated ExoS, bacterial contamination can contribute to experimental error. Using auto-ADP-ribosylation of ExoS as a measurement of internalization, essentially all cell-associated ExoS
MLD and ExoS(MLD 4L
4N) were determined to be internalized. Previous studies showed that
20 to 30% of wild-type ExoS is auto-ADP-ribosylated and is completely ADP-ribosylated within a 45-min chase (31). Thus, the determination of the amount of wild-type ExoS and ExoS(MLD 2RD
3N) internalized may be a low estimation, which does not compromise interpretation of the data.
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50% of ExoS(51-72)/GFP was membrane bound, while in a high-salt extraction buffer (
150 mM NaCl),
90% of the fusion protein was associated with the membrane fraction (data not shown). Characterization of several regions surrounding the MLD showed that extending the membrane localization domain to residues 51 to 77, which added dileucine residues, made membrane association independent of the ionic strength of the extraction buffer, with
90% of ExoS(51-77)/GFP being membrane associated (Fig. 1). Fractionation in low-ionic-strength buffer showed that deletion at either end of the MLD reduced membrane association (Fig. 1). Previous studies observed that deletion of dileucines and adjacent regions [ExoS(57-72)/GFP] abolished membrane localization (22). This indicated that residues at both proximal and distal points within 51 to 77 of ExoS contribute to membrane association.
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FIG. 1. Membrane localization of deletion peptides of the MLD of ExoS. (A) Schematic of ExoS/GFP fusion proteins that were expressed by transient transfection in HeLa cells. Residues of ExoS fused to the N terminus of GFP are indicated on the left. (B) Physical location of ExoS/GFP proteins. HeLa cells (85-mm dishes) were transfected with plasmids (1 µg) encoding the indicated ExoS/GFP fusion protein for 18 h. Cells were harvested, lysed (Total), and separated into nuclear fraction (Pellet) and postnuclear supernatant (PNS), which was centrifuged to generate a cytosol (Cyto) and a membrane (Mem) fraction. Samples were normalized by volume and subjected to SDS-PAGE. ExoS/GFP fusion proteins were detected by Western blotting using mouse anti-GFP immunoglobulin G followed by goat anti-mouse immunoglobulin G conjugated to horseradish peroxidase. GFP-reactive bands were detected by enhanced chemiluminescence; the exposed X-ray film is shown. Ctrl, 5 ng of a GFP standard. (C) Percent of ExoS/GFP fusion protein localized within the membrane. The ratio of ExoS/GFP fusion protein in the membrane fraction to that in the PNS times 100 was calculated by densitometry and is reported as the mean plus standard error of two to five independent experiments. For ExoS(51-77) and ExoS(62-77), P = 0.01, and for ExoS(51-77) and ExoS(57-77), P = 0.008 (significantly different).
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4N)] disrupted perinuclear localization, while the charge substitution [R56N, R63N, D70N: ExoS(MLD 2RD
3N)] did not affect the intracellular localization of the MLD (Fig. 2B and C). Asparagine was chosen as a point mutation substitution to maintain the overall bulk of the R group, with loss of hydrophobicity. To address potential structural disruption due to the asparagine mutation, leucine-to-serine mutations [L53S, L54S, L57S, L61S: ExoS(MLD 4L
4S)] were also tested and was observed to disrupt perinuclear localization, indicating that a conservative substitution also changed the binding properties of the MLD and that gross changes to protein structure were not responsible for the change in localization (data not shown). Additional analysis showed that individual leucines contributed to membrane localization, since single leucine-to-glutamine mutations disrupted the membrane localization when introduced into ExoS(51-66)/GFP. Valine- or isoleucine-to-glutamine mutations were examined in ExoS(62-77)/GFP: the protein with the Val66
Gln substitution retained
50% perinuclear localization, while the Iso68
Gln substitution abolished this localization (Fig. 3A and B). Again, a short version of the MLD was used to enhance the sensitivity of the analysis. Since the Leu61Asn mutation disrupted localization of ExoS(51-66)/GFP as determined both visually and by examination of subcellular fractionation, this mutation along with 2diL
4N was characterized in ExoS(51-77), the full-length MLD. The Leu61Asn and 2diL
4N mutations had partial effects on localization, which supports an additive role for leucines in intracellular localization. Together, these data indicated that membrane association was mediated by multiple hydrophobic interactions of leucines and an isoleucine that were situated throughout the MLD.
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FIG. 2. Leucines, but not charged residues, are critical for the membrane localization of the MLD of ExoS. (A) Schematic of ExoS/GFP fusion proteins that were expressed by transient transfection in HeLa cells; mutated amino acids are indicated in black. (B) Physical location of ExoS/GFP proteins. HeLa cells (85-mm dishes) were transfected with plasmids (1 µg) encoding the indicated ExoS/GFP fusion protein for 18 h. Cells were harvested, fixed in 1% paraformaldehyde-PBS, and imaged with a Nikon inverted microscope for either phase contrast or fluorescence. (C) The percentage of the fusion protein present in the membrane was determined as the ratio of the amount in the membrane to the amount in the cytosol plus the membrane times 100. Samples were normalized by the volume and subjected to SDS-PAGE, and the amount of protein present was calculated by densitometry. The results are reported as the means plus standard errors calculated by densitometry and are the averages of two to five independent experiments.
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FIG. 3. Flanking dileucines and internal leucine and isoleucine play an important role in localization. (A) Schematic of ExoS/GFP fusion proteins that were expressed by transient transfection in HeLa cells. Mutated amino acids are indicated in black. (B) The percentage of the fusion protein present in the membrane was determined as the ratio of the amount in the membrane to the amount in the cytosol plus the membrane times 100. Samples were normalized by the volume and subjected to SDS-PAGE, and the amount of protein present was calculated by densitometry. The results are reported as the means plus standard errors calculated by densitometry and are the averages of two to five independent experiments.
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4N) and ExoS(MLD 2RD
3N) to ADP-ribosylate host proteins (Fig. 4A). ExoS(MLD 4L
4N) and ExoS(MLD 2RD
3N) were secreted from P. aeruginosa into NTA medium with efficiency similar to that of ExoS and ExoS
MLD, and type III secreted ExoS(MLD 4L
4N) and ExoS(MLD 2RD
3N) elicited a rounding phenotype, which indicated that the mutated proteins were delivered into HeLa cells (Fig. 4). A time course study showed that ExoS
MLD rounding of HeLa cells was delayed
15 to 30 min relative to that elicited by wild-type ExoS. Figure 4C shows an early time point in the infection (3 to 3.5 h); extending the infection by 30 min yielded complete cell rounding by all four ExoS derivatives (data not shown).
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FIG. 4. Secretion and cell rounding by type III secreted ExoS. (A) The indicated constructs of ExoS-MLD mutations were engineered and subcloned into pUCP for expression in P. aeruginosa. The vertically striped box indicates ExoS with leucine mutations (L53N, L54N, L57N, L61N) (4L 4N), and the horizontally striped box indicates ExoS with charged-residue mutations (R56N, R63N, D70N). (B) P. aeruginosa PA103(pUCPExoS), PA103(pUCPExoS MLD), PA103(pUCPExoS, MLD 4L 4N), or PA103(pUCPExoS, MLD 2RD 3N) was cultured under conditions to induce type III secretion. The culture medium was concentrated and was subjected to SDS-PAGE followed by Coomassie staining. Protein expression was further confirmed by the Western blotting in which a C-terminal hemagglutinin tag of ExoS was detected by antihemagglutinin antibody followed by enhanced chemiluminescence, using a goat anti-mouse immunoglobulin horseradish peroxidase-conjugated immunoglobulin G. (C) HeLa cells were infected with P. aeruginosa with the ExoS MLD mutants with an MOI of 8:1. After 3 h, cells were scored for rounding. The percent rounded cells was determined in five representative fields (50 cells/field). Error bars represent standard deviations from five fields.
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3N) were similar, while ExoS
MLD and ExoS(MLD 4L
4N) ADP-ribosylated a different set of host proteins. The ability to ADP-ribosylate the Ras GTPases was used as a measurement of the ability of ExoS to traffic to cell membranes. ExoS wild type and ExoS(MLD 2RD
3N) ADP-ribosylated the family of Ras GTPases (proteins marked as -RAS in the autoradiogram [Fig. 5B ]) with similar efficiencies, while neither ExoS
MLD nor ExoS(MLD 4L
4N) efficiently ADP-ribosylated the Ras GTPases. Normalizing the amount of the Ras GTPases ADP-ribosylated to the amount of cell-associated ExoS showed that ExoS(MLD 2RD
3N) was
70% as active in the ADP-ribosylation of the Ras GTPases as wild-type ExoS, while ExoS
MLD was only 6% as active and ExoS(MLD 4L
4N) only 12% as active as wild-type ExoS in the ADP-ribosylation of the Ras GTPases (Fig. 5C). This implies that the leucine-rich motif within the MLD contributes to membrane localization and efficient ADP-ribosylation of the Ras GTPase family of proteins by type III secreted ExoS. In vitro, ExoS and ExoS
MLD have similar capacities to ADP-ribosylate Ras (31).
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FIG. 5. Leucine mutations within the MLD disrupt the ADP-ribosylation of Ras by type III secreted ExoS. (A) Schematic of wild-type ExoS (WT), ExoS( MLD), ExoS(MLD 4L 4N), and ExoS(MLD 2RD 3N). (B) HeLa cells were infected for 3.5 h with P. aeruginosa exoU exoT::Tc pUCP (pUCP), pUCPExoS (WT), pUCPExoS( MLD), pUCPExoS(MLD 4L 4N), or pUCPExoS(MLD 2RD 3N) (2RD 3N) at an MOI of 8:1 or left uninfected (Ctrl). Cells were washed, permeabilized with tetanolysin, and incubated with [32P]NAD before harvesting in SDS-PAGE loading buffer as described in Materials and Methods. Cell lysates were subjected to SDS-PAGE and transferred to polyvinylidene difluoride membranes for autoradiography (X-ray film is shown [lower panel]) or immunoblotting with antihemagglutinin antibody followed by enhanced chemiluminescence (X-ray film is shown [upper panel]). To the right of the gel is indicated the ADP-ribosylation of members of the family of Ras GTPases (Ras). (In Western blotting, 4L 4N runs slightly higher than wild type and 2RD 3N. This is due to a complete auto-ADP-ribosylation.) (C) Efficiency of ADP-ribosylation of Ras GTPases was calculated as the amount of ADP-ribosylation of the members of the family of Ras GTPases (Ras) relative to the amount of ExoS in the lysate (hemagglutinin-reactive material). The activity of the wild-type ExoS was normalized to 100%, and values are the averages of three independent experiments.
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TABLE 2. Bacterial proteins with homology to the MLD of ExoS
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-helix on an adjacent protein (25). LRRs are widely distributed among proteins, including GTPase-activating proteins, spliceosomal protein U2A', Rab geranylgeranyl-transferase, internalin B, dynein light chain 1, nuclear export protein TAP, and the type III cytotoxin YopM of Yersinia (20). Identification of a role for the dileucine motif in mediating protein-protein interactions is relatively recent. Dileucine motifs play roles in endocytosis, targeting proteins to endosomes and lysosomes (11, 24, 35). Although similar to previously described motifs, the MLD within ExoS is unique: since leucines are not divided evenly, as observed for the leucine zipper motif, there are fewer leucines relative to the LRR motifs, and the organization of the ExoS MLD is unique to the dileucine motifs. Relative to bacterial exotoxins, steps in the internalization and trafficking of the type III cytotoxins are less clear. Current models propose that these toxins are injected directly into the cytosol by the type III secretion system and intracellular targeting is related to toxin function. The Yersinia type III cytotoxins are among the most studied with respect to intracellular localization. YopM is a protein scaffold in the nucleus that recruits and stimulates the activity of PRK2 and RSK1 kinases (27). YopM travels to the nucleus via a vesicle-associated pathway that is inhibited by brefeldin A, monensin, and bafilomycin A1 and dependent upon microtubules, which are inhibited by colchicine and nocodazole (34). YopH localizes to the focal complexes and is essential for antiphagocytosis and virulence (17, 30). The N-terminal domain of YopH was shown to interact with p130Cas in vitro (6). YopH dephosphorylates the focal complex proteins p130Cas and focal adhesion kinase (FAK) (4, 30). p130Cas and FAK are therefore important for the uptake of Yersinia (30). YopE is a GTPase activating protein for Rho, Rac, and Cdc42 that localizes to cytoplasmic granules and the perinuclear region (14, 22). The YopE membrane localization domain (residues 54 to 75) can target ExoS to efficiently ADP-ribosylate Ras (22). Previous studies showed that the membrane localization regions of YopE and ExoS MLD are interchangeable, which suggests the importance of membrane localization-involved expression of RhoGAP activity. In addition to the membrane localization function, Cornelis and coworkers found that residues 50 to 77 are inhibitory to YopE release and the binding of chaperone SycE overcomes this inhibitory effect, which suggests that YopE MLD may have multiple functions (8). The molecular basis for the trafficking of these type III toxins remains to be determined.
BLAST alignment identified several bacterial proteins that possessed MLD-like regions, including ExoT, another type III exotoxin of P. aeruginosa; AexT, a type III exotoxin from Aeromonas salmonicida; YopE, a type III toxin from Yersinia; and a putative methyl-accepting chemotaxis protein from P. aeruginosa strain PA14 (Table 1). For each protein, while the leucines are conserved, the primary amino acid sequences adjacent to the leucines vary, suggesting specificity for each membrane interaction. The methyl-accepting chemotaxis protein from P. aeruginosa strain PA14 shares considerable sequence homology with ExoT but lacks an N-terminal secretion signal and part of the C-terminal ADP-ribosyltransferase domain. While the MLD targets ExoS, ExoT, and YopE, a role for intracellular targeting of SptP, another bacterial RhoGAP, remains to be defined. SptP does not contain a leucine-rich motif that resembles the MLD of ExoS. The presence of MLDs within bacterial toxins implies a role for membrane trafficking in the translocation and substrate targeting of bacterial type III cytotoxins within mammalian cells.
This study was supported by a grant from the NIH (NIAID AI030162).
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