Susanne Bauer,
Dagmar Beier, and
Michael Kuhn*
Lehrstuhl für Mikrobiologie, Theodor Boveri-Institut für Biowissenschaften der Universität Würzburg, 97074 Würzburg, Germany
Received 2 September 2004/ Returned for modification 18 October 2004/ Accepted 22 December 2004
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Listeria monocytogenes, a facultative intracellular bacterial pathogen (43) is known to either live in the environment or to infect humans and other mammals, thereby encountering very different microenvironments. The expression of the listerial virulence genes is coordinately regulated to allow the bacteria to proceed through their intracellular life cycle. Central to virulence gene regulation is a protein called PrfA (25), which binds to palindromic DNA sequences in the upstream regions of most known virulence genes.
So far, TCSs have not been studied comprehensively in L. monocytogenes. The availability of the complete genomic sequence of the L. monocytogenes strain EGD-e and the related apathogenic species Listeria innocua, allowed the in silico identification of 16 TCSs (15) in L. monocytogenes of which only one was absent in L. innocua.
In order to study the role of the listerial TCSs for in vitro and in vivo survival and growth of L. monocytogenes more systematically, we constructed mutants with in-frame deletions in 15 out of the 16 response regulator genes. The characterization of the mutants demonstrated that only the deletion of the degU gene had a significant effect on the in vitro and in vivo growth of L. monocytogenes. Furthermore, we show that deletion of degU renders L. monocytogenes nonmotile due to the lack of flagellum expression.
In silico analysis of the TCS genes identified in the genome sequence of L. monocytogenes.
The genome sequence of L. monocytogenes EGD-e contains 15 and 16 open reading frames (ORFs) encoding two-component histidine kinases and response regulators, respectively, including the chemotaxis regulatory system CheYA (Lmo0691/Lmo0692) (12, 15) (Table 1). With the exception of lmo2515 all the response regulator genes are genetically linked to an ORF encoding a cognate histidine kinase. Out of these TCSs Lmo1377/Lmo1378 (LisRK) and Lmo2422/2421 (CesRK) have already been characterized in some detail and were shown to contribute to stress tolerance and antibiotic resistance and to affect virulence (7, 8, 23). Lmo0051/Lmo0050 (AgrAC) which was reported to be required for the full virulence of L. monocytogenes in mice (3) is homologous to the AgrAC TCS of Staphylococcus aureus which is involved in quorum sensing and virulence gene regulation (2). Several TCSs identified showed significant homology to well-characterized TCSs from B. subtilis: Lmo1948/Lmo1947 (ResDE) is homologous to the TCS ResDE (40) which participates in the regulation of both aerobic and anaerobic respiration, while Lmo2501/Lmo2500 (PhoPR) is homologous to the phosphate starvation regulatory system PhoPR. Lmo0287/Lmo0288 is orthologous to the essential TCS YycFG which is probably involved in the regulation of genes involved in cell wall metabolism and membrane protein synthesis (10, 21). The orphan response regulator Lmo2515 (DegU) is highly homologous to DegU. In B. subtilis DegUS is a pleiotropic regulatory system which is involved in the induction of extracellular degradative enzyme synthesis, the expression of late competence genes, and down-regulation of the
D regulon (18, 27). Lmo2678/Lmo2679 (KdpED) is homologous to the KdpED TCS of Escherichia coli which contributes to the adaptation to high-osmolarity conditions by regulating the expression of a high-affinity potassium uptake system encoded by the kdpABC genes (6, 34). In L. monocytogenes orthologs of kdpABC are located adjacent to lmo2678/lmo2679. From the remaining L. monocytogenes response regulators four contain OmpR-like DNA-binding output domains (Lmo1060, Lmo1507, Lmo1745, Lmo2583), one (Lmo1022) has an output domain of the NarL type, and response regulator Lmo1022 contains an exceptionally large output domain with an AraC-like helix-turn-helix motif located at the very C terminus. The output domain of the putative response regulator Lmo1172 does not contain a common DNA-binding motif but carries the RNA-binding ANTAR domain which is present in the AmiR protein of Pseudomonas aeruginosa and other transcription antitermination regulatory proteins (31, 36).
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TCS which were transformed into L. monocytogenes EGD and chromosomal integration was then induced by growing the bacteria at 43°C. The integration mutants were subcultured at 30°C over several days and then screened for the loss of erythromycin resistance. Sensitive clones were screened by PCR to identify mutants with correct in-frame deletions. With one exception this strategy allowed the almost complete deletion of the coding region of the respective response regulator gene with only several base triplets encoding few amino acids from the N and C terminus still present in a short ORF.
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In vitro growth characteristics and motility of the
TCS-RR mutants.
The 15
TCS-RR mutants displayed normal growth in brain heart infusion (BHI) medium at 37°C, 20°C, and 43°C under aerobic conditions. Similarly, addition of 9% NaCl and 0.025% H2O2 to BHI broth had no effect on the growth of any of the mutants, demonstrating that none of the TCSs plays a significant role for the survival under these stress conditions. Interestingly, in-frame deletion of the L. monocytogenes ortholog of kdpE which in E. coli is involved in maintenance of cell turgor by regulating the expression of a high-affinity K+ transporter encoded by the kdpABC genes, did not affect growth at high osmolarity as was already observed by others (6). In B. subtilis, which does not contain orthologs of kdpED and kdpABC, the influx of potassium ions is mediated by the K+ transporters KtrAB and KtrBC (20), orthologs of which are present in L. monocytogenes, which might explain the unaltered phenotype of the kdpE mutant in response to high osmolarity. The addition of 5% ethanol to BHI markedly reduced the growth of the
resD,
phoP, and
lmo1745 mutants and led to enhanced growth of the strains
cesR and
lisR (Fig. 1), according to earlier findings (7, 22). The
degU mutant did not grow at all in the presence of 5% ethanol. In addition to contributing to tolerance to ethanol the TCSs LisRK and CesRK have been shown to influence the sensitivity of L. monocytogenes to various antibiotics and CesRK has been suggested to play a role in sensing and responding to changes in cell wall integrity (8, 23). Similarly, degU, lmo1745, resD, and phoP might directly or indirectly have an impact on the composition of the cell envelope resulting in an altered tolerance to ethanol stress. When cells were cultured anaerobically, no difference in growth was observed between the L. monocytogenes EGD wild type and the
TCS-RR mutants. In contrast to B. subtilis where nitrate respiration is controlled by ResDE, L. monocytogenes is unable to perform nitrate respiration since it lacks a dissimilative nitrate reductase (15). Our results indicate that neither ResDE nor the other TCSs of L. monocytogenes are involved in the regulation of the various fermentative pathways used by this organism.
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TCS-RR mutants was determined by swim-plate assays on semisolid TSB agar. Swimming of the bacteria on and within the agar resulted in halos around the point of inoculation. As already described (9), the L. monocytogenes
cheY mutant showed a defect in the chemotactic behavior since the mutant lacks the response regulator protein interacting with the flagellar motor. However, swimming was also completely abolished in the
degU mutant, while the other
TCS-RR mutants behaved like the wild-type bacteria, irrespective of whether they were cultivated at 24°C or 37°C (Fig. 2). As was observed previously for laboratory-adapted strains (44), the L. monocytogenes EGD strain used here showed temperature-independent swimming on semisolid agar plates. Electron microscopy demonstrated that in contrast to the
cheY mutant which produces flagella, the
degU mutant did not produce flagella indicating a role of degU in flagellar gene expression (Fig. 3). In B. subtilis the DegUS TCS is involved in the complex regulation of transition state-specific processes including the synthesis of degradative enzymes, the development of natural competence and motility (29) and also contributes to gene expression under high-osmolarity conditions (38). Motility is controlled by the phosphorylated form of DegU which negatively regulates the expression of the alternative sigma factor
D controlling the transcription of genes involved in flagellar biosynthesis and chemotaxis (1, 27). In L. monocytogenes which lacks a homolog of
D, the mechanisms of flagellar regulation have not yet been investigated thoroughly. It was shown recently that the repressor protein MogR is involved in the downregulation of expression of the flagellin gene flaA at low temperature (17). A role of DegU for the motility of L. monocytogenes was recently also presented by Knudsen et al., (24) by showing that DegU is necessary for the transcription of the flagellin-encoding flaA gene but the details of how DegU contributes to the process of flagellar gene regulation remain to be elucidated.
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TCS mutants with mammalian cells and their ability to proceed through the well described L. monocytogenes intracellular life cycle were analyzed using four different in vitro cell culture assays. We tested (i) invasion into Cos-1 fibroblast cells, (ii) intracellular growth in J774 macrophages, (iii) F-actin tail formation. and (iv) cell-to-cell spread (both in Caco-2 cells). The invasiveness of most of the mutants for Cos-1 fibroblasts was essentially like that of the wild-type bacteria. Only two mutants (
1507 and
lisR) showed an about threefold reduction in invasion into Cos-1 fibroblasts, which was, however, not as prominent when compared to a
inlAB strain lacking internalin and InlB expression (5). The reasons for these changes in invasion capability are not clear at the moment. Interestingly, the nonmotile L. monocytogenes
cheY and
degU mutants as well as the
1022 mutant showed a slightly increased ability to invade Cos-1 fibroblast cells than the wild-type strain (Fig. 4). In contrast, Dons et al. (9) reported that L. monocytogenes
cheY,
cheA, and
flaA mutants showed significantly reduced association with and invasion into Caco-2 cells when the bacteria were grown at 24°C. When the mutants were centrifuged onto the monolayer, the defect in cell association was less pronounced indicating a role for motility to ensure the initial contact of the bacteria with the host cell. Consequently, when bacteria were grown at 37°C which is the nonpermissive temperature for flagella expression, no differences in cell association between the wild-type strain and the flaA mutant were observed (9). In our experimental settings L. monocytogenes was grown at 37°C prior to invasion since temperature-dependent repression of flagellar expression was no longer observed in the wild-type strain used. While in case of the
degU mutant other features in addition to the lack of flagellar-based motility might account for the increased invasion into Cos-1 cells, the different invasion capabilities into Caco-2 and Cos-1 cells, respectively, of cheY in frame deletion mutants in the L. monocytogenes strains 12067 and EGD remain unexplained.
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TCS-RR mutants behaved indistinguishably from the wild-type bacteria regarding escape from the phagocytic vacuole, intracellular multiplication, and intracellular movement by actin polymerization and cell-to-cell spread which is in line with our observation that the major virulence factors LLO, ActA, and PlcB are efficiently expressed in the mutants.
In vivo properties of the mutants.
To test the virulence of the
TCS mutants, groups of five 6- to 8-week-old female BALB/c mice (Harlan Winkelmann, Germany) were infected intravenously via the tail vein with a dose of 5 x 103 CFU of the bacteria in 100 µl of endotoxin-free phosphate-buffered saline (PBS; Invitrogen). Mice were sacrificed 3 days postinfection, the livers and spleens removed and homogenized, and CFU per organ were calculated. The Student t test was used for statistical analysis, and P values of <0.05 were considered as statistically significant. While several mice infected with the wild-type and mutant bacteria showed signs of disease, mice infected with L. monocytogenes
degU had a normal, healthy appearance. Mice infected with the
degU strain carried a bacterial load which is more than 1 log lower in the spleen (P < 0,05) and more than 1.5 logs lower in the liver (P < 0.05) compared to the wild-type strain at day 3 of infection. For all other mutants tested, the differences of bacterial counts in livers and spleens compared to the wild-type mice are small and in most cases not statistically significant. This virulence defect of the
degU mutant probably cannot be attributed to the lack of flagella observed in this mutant since an aflagellate
flaA mutant of L. monocytogenes 12067 grown at 24°C exhibited an increased bacterial load in the spleen of experimentally infected mice (9). Furthermore, it was shown that the repressor protein MogR is required for the down-regulation of motility gene expression and that deletion of mogR resulted in a 250-fold decrease in virulence (17). In addition, others did not observe a significant virulence attenuation of an isogenic
flaA mutant of L. monocytogenes 10403S after both orogastric and intravenous application (44). In accordance with results obtained with a
cheAY mutant administered orally (9) we did not detect a virulence attenuation of our
cheY mutant when intravenously injected in mice. In contrast, we did not observe a significant decrease in virulence of the
lisR and
agrA mutants which had been reported when the bacteria were administered intraperitoneally and intravenously, respectively (3, 22). Similarly,
kdpE and
cesR mutants of strain L. monocytogenes LO28 reported to be attenuated in the mouse model upon oral administration (22) behaved like the wild-type bacteria in our analysis.
Protein pattern of the L. monocytogenes
degU strain.
The reduced virulence of the
degU strain prompted us to characterize the extracellular protein pattern of this mutant by performing two-dimensional gel electrophoresis. Extracellular proteins of logarithmically grown bacteria were isolated according to procedures described by the manufacturer of the isoelectric focusing equipment (Amersham Biosciences). The proteins were resuspended in urea buffer containing CHAPS (7 M urea, 2 M thiourea, 4% [wt/vol] 3-[{3-cholamidopropyl}-dimethylammonio]-1-propanesulfonate, 70 mM dithiothreitol) and then loaded onto Immobiline DryStrips (Amersham Biosciences) with a pH gradient ranging from 4 to 7. For the isoelectric focusing a total of approximately 180,000 Vh was applied with several stepwise increases in voltage up to 8,000 V (IPGphor IF Unit, Amersham Biosciences). The second dimension was a standard sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) using 12% polyacrylamide gels (ISODalt; Amersham Biosciences) after subsequent treatment of the strips with equilibration buffer (50 mM Tris [pH 8.8], 6 M urea, 30% [vol/vol] glycerol, 2% [vol/vol] SDS, some crystals bromphenol blue) supplemented with 64 mM dithiothreitol for 15 min and with equilibration buffer supplemented with 135 mM iodacetic acid for another 15 min. The gels were fixed and stained either with silver nitrate or with Coomassie blue G250 according to standard procedures.
When analyzing proteins from the supernatant, a number of protein spots were either less prominent or induced in the mutant (data not shown). Seven of the differentially expressed proteins were excised from Coomassie blue-stained gels and further analyzed by mass spectroscopy as described previously (37).
Five out of the seven spots (four up regulated and one down regulated in the mutant) gave clear results in the mass spectroscopy as shown in Table 3 and, surprisingly, turned out to be mostly typical intracellular proteins. Only one of the identified proteins (encoded by lmo0644) has a typical signal sequence; however, the function of this conserved protein which is repressed in the
degU strain is not exactly known. It is most likely a membrane protein belonging to a family of cell wall biogenesis proteins (14). The four proteins whose expression was shown to be induced in the
degU mutant are all typical cytoplasmic proteins; two of them, TufA, encoded by lmo2653, and Tsf, encoded by lmo1657, belong to the translational machinery (30). It is unclear at present why these proteins are differently expressed in the
degU background and why they are found in the supernatant. The listerial superoxide dismutase (SOD) is necessary for the detoxification of reactive oxygen intermediates and may play a role in defending L. monocytogenes against antilisterial host mechanisms. However, a clear role for SOD in listerial pathogenesis has not yet been demonstrated (43). In a recent report SOD, TufA, and Tsf were also detected on the surface of L. monocytogenes (35) supporting our observation that these normally cytoplasmic proteins can indeed be present outside the cell.
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degU strain. GAP is a key enzyme in glycolysis, and its encoding gene gap is present in an operon together with the transcriptional regulator gene cggR (15). Interestingly, GAP has been identified as a major surface protein of gram-positive group A streptococci where it was shown to have also ADP-ribosylating activity and binding activity to multiple cellular surface proteins (32, 33). GAP has also been found on the surface of L. monocytogenes recently (35), and it is therefore tempting to speculate that this enzyme may also play a role in the interaction of L. monocytogenes with host cells. In summary, in the present study we have shown that one response regulator of L. monocytogenes is essential for growth under standard culture conditions and that all the other response regulators are not directly involved in the regulation of several important virulence genes in L. monocytogenes. The response regulator DegU is necessary for full virulence in mice and seems to act as a pleiotropic regulator whose function remains to be characterized in detail. Interestingly, degU is the only response regulator gene in L. monocytogenes which is not genetically linked to a cognate sensor kinase. No ortholog of the sensor kinase gene degS of B. subtilis is present in the genome of L. monocytogenes. It is therefore unclear how the response regulator DegU gets activated. Since a single histidine kinase may phosphorylate several response regulators, as has been shown for the NarX/NarL and NarQ/NarP systems of E. coli (39), it is conceivable that DegU interacts with one of the 15 histidine kinases of L. monocytogenes. Since DegU belongs to the subclass of NarL-like response regulators, Lmo1021 would be a good candidate histidine kinase since it is the only sensor protein with a group II kinase domain (Table 1) which is predicted to interact with NarL-like response regulators (11).
| ACKNOWLEDGMENTS |
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This work was supported by the Deutsche Forschungsgemeinschaft through SFB 479-B5 (M.K.), by the BMBF Competence Network PathoGenoMik (T.W. and D.B.), and by the Deutscher Frauenbund (T.W.).
| FOOTNOTES |
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Both authors contributed equally. ![]()
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