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Infection and Immunity, June 2005, p. 3351-3357, Vol. 73, No. 6
0019-9567/05/$08.00+0 doi:10.1128/IAI.73.6.3351-3357.2005
Copyright © 2005, American Society for Microbiology. All Rights Reserved.
Department of Oral Sciences, School of Dentistry,1 Mucosal and Vaccine Research Center, University of Minnesota, Minneapolis, Minnesota 554552
Received 5 October 2004/ Returned for modification 15 November 2004/ Accepted 14 January 2005
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Expression of sspA and sspB is regulated by environmental signals, including temperature, pH, osmolarity, and saliva (6, 8). SspB may also be transcriptionally regulated by SspA (7). Little is known, however, about the expression of sspA and sspB by cells associated with early biofilms that form on saliva-coated surfaces. We sought to define the roles of SspA and SspB in the initiation of oral biofilms. To detect the expression of sspA and sspB in biofilms formed on saliva-coated HA (sHA), a novel oral biofilm model developed in our laboratory (41) was used. With this model, we also analyzed the effect of inactivation of SspA and SspB on the development of initial S. gordonii biofilms on sHA.
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Preparation of sHA. Human whole saliva was collected from several donors and pooled as described previously (12) using an informed-consent protocol that was reviewed and approved by the University of Minnesota Institutional Review Board. To prepare the sHA used for the biofilm assay as described previously (12), 100 mg ceramic HA (ICN, Aurora, Ohio) was equilibrated for 1 h with 1 mM KH2PO4-K2HPO4 buffer (pH 6.8) with 50 mM KCl, 1 mM CaCl2, and 0.1 mM MgCl2 (modified Gibbons' buffer) at ambient temperature. Equilibrated HA was then incubated with 3 ml of sterile whole saliva for 1 h at 37°C in 5% CO2 and washed three times with ice-cold modified Gibbons' buffer. To prepare sHA for the adhesion assay in buffer, 20 mg of HA was equilibrated for 1 h with modified Gibbons' buffer at ambient temperature. Immediately before use, equilibrated HA was incubated with 1 ml of sterile whole saliva for 1 h at ambient temperature and then washed three times with modified Gibbons' buffer.
sHA adhesion assay. The sHA adhesion assay used was a modification of methods used by Liljemark et al. (21) and Tellefson and Germaine (36). S. gordonii DL1 and an SspA SspB mutant strain were cultured overnight with [3H]thymidine (10 µCi ml1) in chemically defined synthetic medium (37), centrifuged, and adjusted with modified Gibbons' buffer to give a 2.5 x1010-cells/ml suspension. The cells (1 ml, ranging from 107 to 1010) were then incubated with 20 mg of sHA for 1 h at ambient temperature with continuous inversion on a roto-torque. Under these conditions, there is no detectable synthesis of new streptococcal proteins (M. C. Herzberg and H. F. Jenkinson, unpublished observations). The unattached cells were removed by aspiration. The sHA with attached bacteria was washed three times to remove additional unattached cells. The radioactivity associated with sHA was monitored by liquid scintillation counting. Bacterial suspensions of known concentration were used to calculate the number of radioactive counts per minute per input cell. From this, numbers of adherent or sHA-associated bacteria were determined.
Initial sHA biofilm assay. S. gordonii DL1 (3 ml) cells were harvested from an overnight culture by centrifugation, resuspended in an equal volume of fresh THB with 20% whole saliva, mixed with 100 mg of fresh sHA, and incubated for 2 h with continuous inversion on a roto-torque at 37°C in 5% CO2. The planktonic cells and sessile cells attached on sHA were recovered separately as described previously (41). In parallel, cells (3 ml) were cultured in suspension without sHA in THB with 20% saliva under the same incubation conditions. These cells grown in the absence of an adhesion surface were termed free-growing cells. Planktonic cells and free-growing cells were harvested by centrifugation.
RNA extraction. Collected sessile, planktonic, and free-growing cells were resuspended in a lysing reagent (1 ml) containing 150 µl of 2 M sodium phosphate (pH 6.8), 72 µl of H2O, and 778 µl of RLT (RNeasy Mini Kit; QIAGEN). The planktonic cells and free-growing cells were then mixed with 100 mg HA to correct for nonspecific adsorption of RNA from the sessile cell preparation. In their respective mixtures, sessile, planktonic, and free-growing cells were transferred to FastPrep Blue tubes and processed in a FastPrep FP120 machine (Bio 101) at a speed rating of 6 for 2 min. Disrupted cells were incubated for 5 min at 60°C to permit RNA to desorb from HA and then maintained for an additional 5 min at room temperature. After centrifugation (12,000 x g, 10 min), the supernatant was collected and RNA was prepared using an RNeasy Mini Kit (QIAGEN). The integrity of the RNA was checked by electrophoresis in 1.0% (wt/vol) nondenaturing agarose gels. The RNA obtained was then treated with DNase I (Promega, Madison, Wis.) for 2 h at 37°C. The concentration of RNA was determined by measuring the A260 in a spectrophotometer.
Reverse transcription. RNA (10 µg) was reverse transcribed into cDNA with random hexamer primers as described previously (41).
Oligonucleotide primers. The sequences of the primers used in this study are listed in Table 1 and were developed by Primer3 (version 0.2) (31). The source code is available at http://frodo.wi.mit.edu/cgi-bin/primer3/primer3_www.cgi.
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TABLE 1. Oligonucleotide primers used in this study
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To estimate the quantity of initial template in a sample, serial real-time PCR was performed with templates of purified S. gordonii DL1 genomic DNA (10 ng to 0.001 ng). For each gene, a standard curve was developed as the log of the quantity of initial template plotted against the threshold cycle values for the standard wells. In this way, differences in primer efficiency for each gene could be accommodated. The set of primers used in the real-time PCR for any specific gene was selected for an amplification efficiency ranging from 90 to 100% under the conditions described above (for example, see the abpB gene, Fig. 1). From the standard curve, n-fold differences could be determined in the level of initial template quantities of a specific gene in one sample relative to another. As reported previously (40, 41), 16S rRNA was selected as an internal standard to normalize for the amount of RNA in each sample.
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FIG. 1. Real-time PCR of S. gordonii DL1 abpB gene. (A) Standard curve. The standard curve was a plot of the initial template quantity (x axis) versus the threshold cycle (slope = 3.501, x intercept = 16.79, R2 = 0.998, amplification efficiency = 93.0%). (B) Dissociation curve analysis of abpB real-time PCR products from reactions to prepare the standard curve as shown in panel A. The plot was based on the first derivative of the fluorescence reading multiplied by 1 [Rn'(T)]. The specific PCR products melted at 81 ± 1°C.
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Preparation of cell lysates for protein antigen analysis. Free-growing and planktonic cells (12 ml) from the sHA biofilm assay were collected as described above, washed, and resuspended in 6 ml of ice-cold phosphate-buffered saline. Collected cells were sonicated on ice for 5 min at a 50-W output and centrifuged at 20,000 x g for 15 min. The soluble supernatant was concentrated by ultrafiltration using an Amicon Ultra-15 with an Ultracel PL-10 membrane (Millipore, Bedford, MA), and protein concentrations were determined with a bicinchoninic acid (BCA) protein assay kit (Pierce, Rockford, IL).
SDS-PAGE and Western blotting. Proteins were separated by 10% sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) (17). Gels were stained with Coomassie brilliant blue (Bio-Rad, Hercules, CA) and destained in a methanol-acetic solution (40% methanol, 10% acetic acid). Prestained molecular mass standards (ranging from 207 kDa to 7.7 kDa) were purchased from Bio-Rad. Western blotting was performed by electrotransfer of proteins to nitrocellulose membranes with a trans-blot SD semidry electrophoretic transfer cell (Bio-Rad, Hercules, CA). The membrane was then incubated with rabbit anti-FimA serum (38) and visualized with alkaline phosphatase-conjugated anti-rabbit immunoglobulin G (Bio-Rad, Hercules, CA) and 5-bromo-4-chloro-3-indolylphosphate (BCIP)-Nitro Blue Tetrazolium (Sigma, St. Louis, MO).
Slot blotting. Total proteins (1 µg protein as estimated by the BCA assay) were slot blotted onto nitrocellulose membrane by a Hybri-slot manifold (Bethesda Research Laboratories, Bethesda, MD) following the instructions of the manufacturer. The membrane was then incubated with rabbit antiserum against paraformaldehyde-fixed cells of S. gordonii DL1 (Pacific Immunology Corp., Ramona, CA) and visualized as described for Western blotting.
Statistics. Gene expression and biofilm formation by S. gordonii strains were compared for differences using an unpaired two-tailed t test.
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TABLE 2. sspA- and sspB-specific mRNA n-fold difference in planktonic, sessile, and free-growing S. gordonii DL1 cells
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FIG. 2. Initial biofilm formation on sHA by S. gordonii DL1 and SspA, SspB, and SspA SspB inactivation mutants. Wild-type and mutant strains were incubated with fresh sHA in THB containing 20% saliva with continuous rotation for 2 h at 37°C. Sessile cells attached to sHA and planktonic cells were collected separately and disrupted. Biomass was measured by real-time PCR as described in Materials and Methods. Data shown are the mean ± standard error (n = 3). *, P < 0.05.
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FIG. 3. Total RNA extracted from sessile, planktonic, and free-growing cells of S. gordonii DL1 and the SspA SspB mutant. Wild-type and mutant strains were incubated with fresh sHA in THB containing 20% saliva with continuous rotation for 2 h at 37°C. In parallel, cells were cultured in suspension without sHA in THB with 20% saliva under the same incubation conditions. These cells grown in the absence of an adhesion surface were termed free-growing cells. Sessile cells attached to sHA, planktonic cells, and free-growing cells were collected separately and disrupted. Total RNA was extracted, purified, and quantified as described in Materials and Methods. Symbols: , S. gordonii DL1 wild-type strain; , SspA SspB mutant strain. Data shown are the mean ± standard error (n 4). *, P < 0.05.
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TABLE 3. Adhesin gene-specific mRNA n-fold differences between the sspA sspB mutant relative to the S. gordonii DL1 wild type recovered as initial planktonic and sessile biofilm cells and free-growing cells
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FIG. 4. Adhesion of S. gordonii DL1 and SspA SspB mutant strains to sHA. Both strains were cultured with [3H]thymidine overnight in FMC (37) and washed. Cells (1 ml, containing 107 to 1010 cells) were incubated with sHA for 1 h at room temperature with continuous rotation. The radioactivity associated with sHA was monitored by liquid scintillation counting. Bacterial suspensions of known concentration were used to calculate the number of radioactive counts per minute per input cell. From this, numbers of adherent or sHA-associated bacteria were determined. Symbols: , S. gordonii DL1 wild-type strain; , SspA SspB mutant strain. Values are given as the mean number of cells bound ± the standard deviation, based on two independent experiments performed in duplicate.
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FIG. 5. Expression of FimA-cross-reactive antigens. Planktonic and free-growing cells from S. gordonii DL1 and the SspA SspB mutant were lysed by sonication and centrifuged to clarity, and the proteins in the supernatant were resolved by 10% SDS-PAGE. A replicate gel was stained with Coomassie brilliant blue (A). Resolved proteins were then electrotransferred to nitrocellulose membrane and probed with anti-FimA serum in a Western blot assay (B). Prestained molecular weight standards are shown at the left. Each lane contained 1 µg of protein. Total proteins (1 µg) were also slot blotted onto nitrocellulose membrane and probed with anti-S. gordonii DL1 serum (C). Lane 1, standards. Lane 2, free-growing cells of S. gordonii DL1. Lane 3, free-growing cells of SspA SspB mutant strain. Lane 4, planktonic cells of S. gordonii DL1. Lane 5, planktonic cells of SspA SspB mutant strain.
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A novel oral biofilm model (41) was utilized to test whether expression of sspA and sspB were regulated during the initiation of biofilms on sHA. Using this model, we now show that sessile and free-growing cells differentially expressed sspA and sspB, suggesting that production of SspA and SspB may be modulated during the initiation of biofilms on sHA.
In a previous study, we identified a novel two-component system, BfrAB, which is required for biofilm formation by S. gordonii (41). Inactivation of BfrAB reduces adhesion to sHA. Furthermore, the bfrAB gene is differentially expressed by sessile cells and planktonic cells from sHA biofilms (41), suggesting that BfrAB may be involved in the initiation of biofilms on sHA by S. gordonii. It not yet known whether BfrAB is involved in the regulation of sspA and sspB in initial biofilms. Differential expression of functionally varied genes between sessile and planktonic cells in sHA biofilms, however, suggests that the initiation of oral biofilms is a tightly regulated process.
To test whether inactivation of SspAB affects the initiation of sHA biofilm formation by S. gordonii, the SspA strain and the SspB strain were compared with wild-type S. gordonii DL1 in a 2-h sHA biofilm assay. The biomass formed by the strains was estimated by comparing the amounts of 16S rRNA gene. Quantitative real-time PCR was used since it has been shown to be a rapid, reliable, and sensitive method to compare the relative amounts of cells (22). Contrary to our expectations, both the SspA and SspB strains showed greater biofilm formation on sHA than the wild-type strain. Dual inactivation of SspA and SspB (SspA SspB strain) further increased the biofilm-forming ability on sHA.
Consistent with these results, under otherwise identical conditions, total RNA extracted from the SspA SspB sessile cells was significantly higher than the total RNA from the wild type (Fig. 3). Total RNA extracted from the SspA SspB planktonic cells, however, was significantly lower than the total RNA from the wild-type cells. On the other hand, similar amounts of total RNA were recovered from parallel free-growing cells of the SspA SspB mutant and the wild type. These data suggest that the greater sessile biomass of SspA SspB mutant cells is not caused by the intrinsic differences in growth rates between the SspA SspB strain and the S. gordonii DL1 wild type.
Since multiple adhesins may be involved in the initiation of biofilms, we hypothesized that inactivation of SspAB modulated the profile of adhesin gene expression during initial biofilm formation in vitro by S. gordonii. The SspA SspB and wild-type strains were compared for expression of six adhesin genes of S. gordonii, which are known to bind the cell to saliva-coated glass surfaces or other oral bacteria as coaggregation partners (13, 14). These adhesin genes included scaA, hsa, abpB, abpA, cshA, and cshB. ScaA mediates S. gordonii coaggregation with Actinomyces naeslundii (1, 16). SsaB, the counterpart of ScaA in S. sanguis, is involved in the coaggregation with Actinomyces and adhesion to sHA (9, 10). The sialic acid-binding protein (Hsa) binds glycoconjugates found in salivary mucins (18, 33), which are major pellicle constituents, and platelets (34). AbpA (20) and AbpB (29) are two amylase-binding proteins in S. gordonii. S. gordonii AbpA may be the major ligand for binding to amylase in salivary pellicle (29). Inactivation of AbpA reduces the adhesion of S. gordonii to amylase-coated HA, biofilm formation in a saliva-coated flow cell system (30), and oral biofilm development in rats (35). AbpB, however, may be required to initiate oral biofilms in starch-eating rats (35). CshA and CshB are involved in the determination of streptococcal cell surface hydrophobicity (24, 26), coaggregation with Actinomyces (25), binding to immobilized fibronectin (23), and mucosal colonization of mice (25). The multiplicity of adhesins, each with different structures or alternatively expressed (e.g., CshA and CshB), would likely explain the complex specificity and tropisms shown by the oral streptococci for saliva-coated hard and soft tissue surfaces (11). While CshA levels were up-regulated in S. sanguis biofilms formed on glass beads (2), there are no reports known to us to indicate that adhesion of oral streptococci to saliva-coated tooth-like surfaces regulates the expression of adhesin genes.
We now show that inactivation of SspAB significantly up-regulated the expression of scaA and abpB in sessile, planktonic, and free-growing cells using a real-time reverse transcription-PCR method. Planktonic and free-growing SspA SspB cells also appeared to express more ScaA antigen than wild-type S. gordonii DL1. We attempted to estimate levels of ScaA protein in sessile cells from the wild-type and mutant strains as we reported for RNA (41). Proteins isolated from sessile cells are mixed with salivary proteins associated with sHA. While total protein can be recovered, the proportion that represents bacterial proteins is difficult to quantify. An efficient method to separate sessile cells from the sHA is being developed. Given the consistency that we have shown between scaA-specific mRNA and protein antigen levels, and the gain in associated function, the data show that small changes in gene expression may be biologically meaningful during biofilm formation. Pending further study, these findings suggest strongly that other low-magnitude changes in adhesin gene expression during initial biofilm formation may also be biologically important.
As reported previously for the SspA strain (15), the washed SspA SspB strain and wild-type S. gordonii DL1 in Gibbons' buffer are now shown to adhere to sHA similarly. Based on the data from this study, SspA SspB free-growing cells may produce higher levels of adhesins such as ScaA. These adhesins may compensate for the loss of SspAB-mediated adherence to sHA.
Why did the SspA SspB mutant strain show "normal" sHA adhesion but significantly increased biofilm formation on sHA? In nutritionally rich environments, once bacteria contact attractive surfaces, an adherent biomass begins to accumulate. Sessile, planktonic, and free-growing cells express different phenotypes (27, 32, 41). In the sHA adhesion assay (Fig. 4), bacterial cells were washed, maintained, and assayed in buffer in the absence of carbon and nitrogen sources. Cells appear to be metabolically inactive, without detectable protein synthesis (Herzberg and Jenkinson, unpublished). Under these conditions, adhering cells cannot reflect the sessile colonial phenotype that is acquired after adhering to sHA in nutrient-rich medium. The sHA adhesion assay therefore can test only the adhesion ability of free-growing cells. In contrast, bacterial cells were maintained and assayed in nutrient-rich medium (THB) in the sHA biofilm assay. The biofilm assay distinguishes the responses of the SspA SspB mutant and the wild type during initial adhesion to sHA and in the resulting sessile and planktonic cells. We speculate that inactivation of SspAB results in responses to initial adhesion to sHA that differ from the S. gordonii DL1 wild type. These altered responses to adhesion may contribute to the increased initial sHA biofilm formation by the SspA SspB mutant.
Adhesin genes appear to be tightly regulated. For example, SspA and SspB share a common receptor, a high-molecular-weight SAG found in the salivary pellicle that coats the tooth (4, 5). Inactivation of SspA reduces the expression of sspB (7). Hence, these two adhesins show similarities in structure, function, and at least one-directional coregulation. Since bfrAB appears to regulate initial biofilm formation on sHA (41), a coordinated signaling system may exist. Considering the new data in this report, we propose that SspAB, ScaA, and AbpB are the members of a closely regulated adhesin network.
It is not clear at this time how inactivation of SspAB alters the pattern of expression of these adhesin genes. SspA protein can bind to the upstream regulatory region of the sspB gene (7), and may act as a positive transcriptional regulator involved in the expression of sspB. We speculate that SspA and perhaps SspB can regulate the expression of scaA and abpB as negative transcriptional regulators. It is also possible that the proposed adhesin network includes other adhesin or nonadhesin components, of which some may perform regulator roles. Further analyses of the regulatory mechanisms in S. gordonii adhesin networks may provide new insights into the processes of adhesion and initial biofilm formation.
The assistance of Joel Rudney and James Hodges with the statistical analyses is appreciated.
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