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Infection and Immunity, October 2006, p. 5609-5616, Vol. 74, No. 10
0019-9567/06/$08.00+0 doi:10.1128/IAI.00321-06
Copyright © 2006, American Society for Microbiology. All Rights Reserved.
Division of Pediatric Infectious Diseases, School of Medicine, Johns Hopkins University, Baltimore, Maryland 21287,1 Division of Clinical Research, National Health Research Institutes, Tainan, Taiwan,2 Institute of Molecular Medicine, National Cheng Kung University Medical College, Tainan, Taiwan3
Received 27 February 2006/ Returned for modification 31 May 2006/ Accepted 20 July 2006
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We have previously shown that the type 1 fimbria is an important determinant involved in E. coli K1 binding to and invasion of HBMEC (32). The type 1 fimbria is encoded in the fim gene cluster, which includes at least nine genes required for its biosynthesis (19). The fimbriae are composed of a polymer with the major subunit protein, FimA, and a tip structure containing FimF, FimG, and FimH (13). The adhesin, FimH, is responsible for the mannose-sensitive binding ability of type 1 fimbriae (8). The fim promoter, located in a 314-bp fragment (invertible element or fim switch) upstream of the major-subunit-encoding gene, fimA, controls the expression of type 1 fimbriae. The orientation of the 314-bp invertible element can be switched by site-specific recombination catalyzed by two recombinases, FimB and FimE, encoded upstream of this DNA fragment (14). By switching the orientation of the invertible element, the fim promoter can be directed toward the downstream fim structural genes to express type 1 fimbriae (phase ON) or toward the opposite direction to stop the type 1 fimbria expression (phase OFF) (1). Since type 1 fimbria expression is phase variable, wild-type E. coli organisms are a heterogeneous mixture containing both phase-ON and phase-OFF populations of type 1 fimbriae. We constructed type 1 fimbria locked-ON and locked-OFF mutants of E. coli K1 strain RS218, whose fim promoters were fixed in the "ON" and "OFF" orientations, respectively. The locked-ON mutant, which constitutively expresses type 1 fimbriae, exhibited significantly greater abilities to bind to and invade HBMEC than the wild-type strain, whereas the locked-OFF mutant, which exhibits no type 1 fimbria expression, showed significantly decreased abilities to bind to and invade HBMEC in comparison with the wild-type strain (32). These findings clearly indicate that type 1 fimbriae contribute to E. coli K1 binding to and invasion of HBMEC.
We have also shown that outer membrane protein A (OmpA), one of the major outer membrane proteins, is important in E. coli K1 RS218 binding to and invasion of HBMEC (9, 12, 27). In characterizing the role of OmpA in E. coli K1 binding to and invasion of HBMEC, we showed that deletion of ompA decreased the expression of type 1 fimbriae. The purposes of the present study were to characterize of the effect of ompA deletion on type 1 fimbria expression and to elucidate how OmpA contributes to E. coli K1 binding to and invasion of HBMEC, e.g., via its interaction with HBMEC and/or its effect on type 1 fimbriae.
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TABLE 1. Strains used
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To insert the ompA gene into the lacZ locus of the ompA deletion mutant of E. coli K1 RS218, the primers OmpA-F and CM52 (Table 2) were designed to amplify the ompA gene and its promoter region. The suicide vector pJRinslacZ, which is a pCVD442 derivative, contains a lacZ gene (26), and the PCR product was cloned into the EcoRV site of the lacZ gene in the plasmid. The resulting plasmid, designated pR10, was then subjected to the allelic exchange procedure as described previously (3, 6). The resulting E. coli K1 strain was designated CHT126 (Table 1).
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TABLE 2. Primers used
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Invertible-element orientation assay. The invertible-element orientation assay utilized the asymmetrical digestion site of SnaBI within the invertible element as previously described (32). A pair of primers, Ch1-F and Ch1-R (Table 2), were designed to amplify a 602-bp fragment containing the invertible element from both phase-ON and phase-OFF bacteria. When the invertible element is in the ON position, SnaBI digestion produces fragments of 404 and 198 bp, whereas for the OFF position, the restriction enzyme digestion results in fragments of 442 and 160 bp. The SnaBI-digested PCR products were separated on a 1.5% agarose gel. To quantify the percentage of phase-ON bacteria, a standard curve was prepared as described previously (16, 32), except that defined numbers of the type 1 fimbria locked-ON and locked-OFF bacteria were used as PCR templates. The intensity of each band of the DNA fragments was determined using the ImageJ program downloaded from the NIH website (http://rsb.info.nih.gov).
Yeast aggregation assay. Yeast aggregation titers of E. coli strains were measured as described previously (30, 32). Briefly, E. coli cultures at an optical density of 0.4 at 530 nm were subjected to serial twofold dilutions in phosphate-buffered saline (PBS) and mixed with commercial baker's yeast cells (5 mg/ml). Aggregation was monitored visually, and the titer was recorded as the highest dilution giving a positive aggregation result.
Immunofluorescence labeling of bacteria. Type 1 fimbria antiserum was derived from immunizing rabbits with purified type 1 fimbriae as previously described (29, 32). To remove nonspecific antibodies, the antiserum was absorbed with the type 1 fimbria locked-OFF mutant of E. coli K1 RS218.
Surface presentation of type 1 fimbriae on whole bacteria was assessed by immunofluorescent microscopy with the absorbed type 1 fimbriae antiserum as previously described (20, 32), with a minor modification. Briefly, overnight bacterial cultures were harvested and washed once with PBS. Bacterial cells were fixed by mixing 200 µl of bacterial suspension with 800 µl of a 4% (wt/vol) solution of paraformaldehyde in PBS. The mixture was incubated on ice for 20 min. The fixed bacteria were then washed twice with PBS. Fifteen microliters of each sample was placed on a poly-L-lysine-coated slide and air dried. Twenty-five microliters of a 1:10 dilution of anti-type 1 fimbria serum in PBS was placed on top of each sample, and the samples were incubated for 1 h at room temperature in a moist chamber. After being washed three times with PBS, each slide was incubated with 25 µl of goat fluorescein isothiocyanate-conjugated anti-rabbit immunoglobulin G antibodies at a dilution of 1:100 in PBS for 1 h at room temperature in a moist chamber and examined by fluorescence microscopy as described previously (32).
Immunodot blot assay. To assess the levels of type 1 fimbriae presented on the E. coli surface, immunodot blot assays were performed as previously described (4). Briefly, 1 ml of overnight bacterial culture was centrifuged, and the pelleted bacteria were resuspended with 100 µl of PBS. Five microliters of the bacterial suspension was spotted onto nitrocellulose membrane. After blocking with 2% bovine serum albumin in PBS, the membrane was subjected to antibody labeling. The rabbit type 1 fimbria antiserum was used as the primary antibody at a dilution of 1:2,000, and goat horseradish peroxidase-conjugated anti-rabbit immunoglobulin G antibody was utilized as the secondary antibody at a dilution of 1:3,000. The signals were visualized with the Amersham ECL Western detection system (Amersham, Piscataway, NJ).
Real-time quantitative PCR (qPCR) analysis. Total RNA was extracted using a RiboPure-Bacteria kit (Ambion, Austin, TX) according to the manufacturer's instructions. Purified RNA was cleaned up and concentrated using the RNeasy minikit (QIAGEN, Valencia, CA) with on-column DNase treatment according to the manufacturer's instructions. The amount and quality of the RNAs were verified by measuring the absorbance at 260 and 280 nm and by native agarose gel electrophoresis.
Random-primed reverse transcription of RNA was performed with the SuperScript first-strand synthesis system for reverse transcription-PCR (Invitrogen, Carlsbad, CA), using 200 ng of RNA for each reaction. Samples without reverse transcriptase were concurrently prepared and analyzed to verify the absence of contaminating genomic DNA.
Real-time qPCR analysis was performed in a LightCycler system using the LightCycler FastStart DNA MasterPLUS SYBR green I kit (Roche Applied Science, Indianapolis, IN). The cDNA, obtained as described above, was diluted 10-fold in nuclease-free distilled water; 5 µl was used for qPCR. The PCR program consisted of one activation/denaturation step at 95°C for 10 min and 40 amplification/quantification cycles of 94°C for 10 s, 60°C for 5 s, and 72°C for 10 s, with signal acquisition at the end of each cycle. PCR amplification was followed by melting curve analysis to verify the identity of the PCR products and the absence of primer dimers. Amplification products were further verified by agarose gel electrophoresis.
For fimB qPCR analysis, a 157-bp PCR fragment was amplified using primers FimB-F and FimB-R (Table 2). For fimE qPCR analysis, a 170-bp PCR fragment was amplified using primers FimE-F and FimE-R (Table 2). Expression of fimB and fimE was normalized against the expression of the 16S rRNA; for the analysis of 16S rRNA expression, a 150-bp PCR fragment was amplified using primers 16S-F and 16S-R.
Efficiency-corrected, calibrator-normalized relative quantification was performed as described in Roche Applied Science technical note no. LC 13/2001. The Relative Expression Software Tool was used to analyze the statistical significance of the data by pairwise fixed reallocation randomization (21).
Assays of E. coli invasion of and association with HBMEC. HBMEC were isolated and cultured as previously described (31). HBMEC cultures were grown in RPMI 1640 containing 10% heat-inactivated fetal bovine serum, 10% Nu-Serum, 2 mM glutamine, 1 mM pyruvate, penicillin (100 U/ml), streptomycin (100 µg/ml), essential amino acids, and vitamins. Invasion assays were performed using the gentamicin protection assay as previously described (32). Briefly, confluent monolayers of HBMEC grown in 24-well plate were infected with 107 bacteria at a multiplicity of infection of 100. After 90 min of incubation at 37°C, the monolayers were washed with PBS, incubated with medium containing gentamicin(100 µg/ml) for 1 h to kill extracellular bacteria, and then washed three times with PBS. HBMEC were lysed by incubation with sterile water at room temperature for 30 min. The released intracellular bacteria were enumerated by plating on sheep blood agar. The invasion rates were calculated by dividing the number of internalized bacteria by the number in the original inoculum. Results are presented as relative invasiveness, i.e., the percent invasion compared with the invasion rate of the wild-type RS218, which was arbitrarily set at 100%. Association assays were performed like the invasion assay described above except that the gentamicin treatment step was omitted.
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FIG. 1. Expression levels of the fim genes in the ompA isogenic mutant compared to those in the wild-type RS218. The expression levels in the ompA mutant are presented as percentages in comparison to those in the wild-type strain (which were set at 100%). Data are shown as means ± standard deviations from three independent experiments. *, P < 0.01 compared to the wild-type strain.
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FIG. 2. (A) Invertible-element orientation assays show that ompA deletion preferentially directs the fim promoter to the phase-OFF orientation. The y axis indicates the percentages of the bacteria with fim promoter in the phase-ON orientation (mean ± SD). WT, wild type. (B) Western blot analyses of OmpA proteins from the total lysate of the wild-type RS218, the ompA mutant, and CHT126 with the anti-OmpA monoclonal antibody. Insertion of ompA into the chromosomal lacZ locus of the ompA mutant (CHT126) was able to restore the expression of OmpA to the wild-type level. (C) HBMEC association and invasion assays of the wild-type RS218, the ompA mutant, and CHT126. The association and invasion frequencies of CHT126 were restored to the levels of the wild type. Hatched and filled bars indicate relative association and invasion rates, respectively, compared with those of the wild-type strain, which were set at 100%. The ompA mutant and CHT126 exhibited 49% ± 5% and 108% ± 23% of the association frequency of the wild-type strain, respectively, while the same mutants showed 43% ± 6% and 90% ± 5% of the invasion frequency of the wild type, respectively. The invasion and association frequencies of the wild-type RS218 were 0.9% ± 0.09% and 21% ± 5% of the original inoculum, respectively. Data shown (means ± SDs) are representative of three independent experiments done in triplicate.
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TABLE 3. Comparison of type 1 fimbria piliation and yeast aggregation among RS218 and its derivatives
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Characterization of the effects of ompA deletion on the orientation of the fim promoter. To further characterize the effect of the ompA deletion on the fim promoter (or invertible-element) switching, a single colony of the ompA mutant or the parent strain grown on blood agar plates was resuspended in LB broth and allowed to grow under static conditions for 48 h at 37°C. Samples were taken at various time points after 12 h of incubation, and the percentages of bacteria whose fim promoters were in the phase-ON orientation were measured by the invertible-element orientation assay. The bacteria grown on the blood agar plates were, as expected, predominantly type 1 fimbria phase OFF (18). As shown in Fig. 3, the percentages of the phase-ON bacteria gradually increased for the parent strain and the ompA mutant during this experimental period (Fig. 3). However, after 16 h of incubation, the percentages of the phase-ON bacteria in the wild-type strain started to be significantly higher than those in the ompA mutant (27% ± 2% in the wild type versus 16% ± 3% in the ompA mutant at 16 h of incubation; P = 0.006), and the significant differences were maintained until 45 h of incubation.
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FIG. 3. Dynamics of fim promoter switching in the wild-type (WT) RS218 and the ompA mutant. The orientation of the fim promoter (invertible element) was determined with the invertible-element orientation assay as described in Materials and Methods. The y axis indicates the percentages of the bacteria with the fim promoter in the phase-ON orientation at different time points. Points represented the means of three separate measurements, and error bars show standard errors of the means.
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ompA deletion affects type 1 fimbria expression mainly through fim promoter flipping. The above data suggest that ompA deletion affects type 1 fimbria piliation through preferentially driving the fim promoter toward a phase-OFF orientation involving both FimB and FimE. However, these results cannot exclude the possibility that the ompA deletion might have affected other steps of type 1 fimbria biogenesis (for example, type 1 fimbria assembly or presenting the fimbriae to the bacterial surface). To address this question, we constructed an ompA deletion mutant in the type 1 fimbria locked-ON background (32); this new double mutant was designated CHT059. In the locked-ON mutant, 5 bp of the 5'-end flanking region of the invertible element has been changed to abolish site-specific recombination so that the fim promoter is fixed in the phase-ON orientation to allow constant type 1 fimbria expression (32). We assessed the percentages of type 1 fimbriated bacteria in CHT059 and the locked-ON mutant. Immunofluorescence microscopy with type 1 fimbria antiserum showed that almost all the bacteria of these two mutants were type 1 fimbriated (99% ± 1% in CHT059 and 98% ± 1% in the locked-ON mutant) (Table 3). The results with immunofluorescence microscopy suggest the percentages of type 1 fimbriated bacteria, not the total amount of the fimbriae presented on the surface of the bacterial population. To assess whether or not the total numbers of type 1 fimbriae presented on the surfaces of the two strains are similar, we performed immunodot blot assays with the type 1 fimbria antiserum. With the same numbers of bacteria, CHT059 and the locked-ON mutant showed similar densities of signals, while the wild-type RS218 showed considerably weaker signals (Fig. 4). In addition, we performed yeast aggregation assays of the two mutants to investigate the yeast aggregation abilities of their type 1 fimbriated population. The two mutants showed similar yeast agglutination titers (Table 3). Since the ability of type 1 fimbriae to aggregate yeast is through their adhesin protein, FimH, the results of the yeast aggregation assays suggest that deletion of ompA does not affect the proper presentation of the fimbriae on the bacterial surface in the type 1 fimbria locked-ON background. The above findings suggest that type 1 fimbria expression is similar in the type 1 fimbria locked-ON mutant and its ompA deletion mutant and that ompA deletion decreases type 1 fimbria expression mainly through the change in the fim promoter orientation (i.e., phase OFF).
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FIG. 4. Immunodot blot analysis of the wild-type (WT) RS218, the type 1 fimbria locked-ON mutant, and CHT059 (the ompA deletion mutant from the type 1 fimbria locked-ON mutant) with anti-type 1 fimbria polyclonal antibody.
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FIG. 5. HBMEC association and invasion abilities of the wild-type (WT) RS218, the ompA deletion mutants, the type 1 fimbria locked-ON mutant, and CHT059 (ompA deletion mutant in the type 1 fimbria locked-ON background). Hatched and filled bars indicate relative association and invasion rates, respectively, compared with those of the wild-type RS218, which were set at 100%. The invasion and association frequencies of the wild-type RS218 were 0.78% ± 0.07% and 17% ± 3% of the original inoculum, respectively. Data shown (means ± SDs) are representative of three independent experiments done in triplicate.
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FIG. 6. HBMEC association and invasion abilities of the wild-type (WT) RS218, the ompA deletion mutants, the type 1 fimbria locked-OFF mutant, and CHT062 (ompA deletion mutant in the type 1 fimbria locked-OFF background). Hatched and filled bars indicate relative association and invasion rates, respectively, compared with those of the wild-type RS218, which were set at 100%. The invasion and association frequencies of the wild-type RS218 were 0.87% ± 0.06% and 19% ± 6% of the original inoculum, respectively. Data shown (means ± SDs) are representative of three independent experiments done in triplicate.
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We initially showed by E. coli DNA microarray analysis that the mRNA levels of the genes involved in type 1 fimbria biosynthesis were significantly lower in the ompA deletion mutant than in the parent E. coli K1 strain RS218. These findings suggest that ompA deletion may affect type 1 fimbria expression. Since the expression of type 1 fimbriae is phase variable, controlled by the switching of the fim promoter, we compared the percentages of the bacteria whose fim promoter is in the ON orientation between the ompA deletion mutant and the parent strain. The percentage of the bacteria with the fim promoter in the ON orientation was significantly lower in the ompA mutant than in the parent strain. The fact that the fim promoter of the ompA mutant is more preferentially orientated in the OFF direction compared to the parent strain is consistent with our finding of decreased fim expression in the ompA mutant. The lower type 1 fimbriation in the ompA mutant was also confirmed by immunofluorescence microscopy with the anti-type 1 fimbria serum and by yeast aggregation assays (Table 3).
To assess whether the surface presentation of the fimbriae was affected by the ompA deletion, we constructed an ompA deletion in the type 1 fimbria locked-ON background (strain CHT059), in which the fim promoter is fixed in the phase-ON orientation and the orientation of the fim promoter will not be affected by the deletion of ompA. Immunofluorescence microscopy and immunodot blot analysis as well as yeast aggregation assays revealed that the levels of type 1 fimbriae presented on the surface of strain CHT059 are similar to those of the locked-ON mutant (Table 3 and Fig. 4). We therefore conclude that the effect of ompA deletion on type 1 fimbria expression is mainly through the fim promoter switch.
It is known that the inversion of the type 1 fimbrial switch is a site-specific recombination process that is dependent upon the recombinases FimB and FimE (14). FimB is able to switch the orientation of the promoter in both directions, from ON to OFF or from OFF to ON, while FimE can switch the orientation of the promoter only from ON to OFF. The real-time PCR analysis revealed that the fimB and fimE mRNA levels of the ompA deletion mutant are significantly decreased in comparison with those of the parent strain. It remains to be determined whether these decreased levels of the fimB and fimE mRNAs are related to OFF orientation of the fim promoter in the ompA deletion mutant and also how ompA deletion affects the levels of the fimB and fimE mRNAs. Studies are in progress to determine whether ompA deletion affects known regulators of fimB and fimE such as leucine response regulatory protein (Lrp), integration host factor, and OmpR.
OmpA, a major outer membrane protein of E. coli, is important to maintain the integrity of the bacterial outer membrane structure. X-ray crystallography and nuclear magnetic resonance studies showed that the N terminus of OmpA is composed of eight transmembrane ß-strands that are connected by three short periplasmic turns and four relatively large surface-exposed hydrophilic loops (15). We have demonstrated that preincubation of HBMEC with wild-type N-terminal OmpA protein, but not with OmpA with the loop deleted, decreased the E. coli K1 association with HBMEC in a dose-dependent manner (27). However, N-terminal OmpA alone could not fully explain the contribution of OmpA to E. coli K1 binding to HBMEC, because receptor-saturated concentrations of N-terminal OmpA did not decrease E. coli K1 binding to the level of the ompA deletion mutant. These findings suggest that the contribution of OmpA to E. coli K1 binding to HBMEC may include its binding to HBMEC as well as its effect on other binding structures of E. coli.
Because of the importance of type 1 fimbriae in E. coli K1 binding to HBMEC, we speculate that the HBMEC binding defect of the ompA deletion mutant might be in part through type 1 fimbriae, as the ompA deletion mutant exhibited decreased type 1 fimbriation compared to the parent strain. However, our data indicate that the contribution of OmpA to E. coli K1 binding to HBMEC may not be mainly dependent upon its effect on type 1 fimbria expression. For example, we examined whether the decreased binding and invasion abilities of the ompA mutant are related to its decreased type 1 fimbria expression by comparing the association and invasion abilities of strain CHT059 (the OmpA mutant derived from the locked-ON mutant) with those of the type 1 fimbria locked-ON mutant in HBMEC. Since both mutants constitutively express type 1 fimbriae, the influence of type 1 fimbria phase variation was removed, and as expected, the two strains exhibited similar levels of type 1 fimbria expression. However, the ompA deletion mutant derived from the locked-ON background (CHT059) still exhibited significantly lower association and invasion rates than the locked-ON mutant. These findings suggest that decreased type 1 fimbria expression alone may not be fully responsible for the decreased abilities of the ompA deletion mutant to interact with HBMEC.
Since both OmpA and type 1 fimbriae were shown to contribute to E. coli K1 binding to HBMEC, we next investigated whether these two binding structures are additive in their contributions to HBMEC binding. For this purpose, we constructed the ompA deletion mutant from the type 1 fimbria locked-OFF background (CHT062). The association and invasion rates of CHT062 (the mutant without type 1 fimbria and OmpA expression) were significantly lower than those of the ompA deletion mutant and the locked-OFF mutant. Of interest, the HBMEC association and invasion defects with the locked-OFF mutant were significantly greater than those with the OmpA mutant (Fig. 6), suggesting that the contributions of type 1 fimbriae to HBMEC association and invasion are greater than those of OmpA. These findings are consistent with those of our previous studies, where the locked-OFF and fimH isogenic mutants were found to be defective in HBMEC association and invasion (32). It is, however, important to note that our previous studies have revealed greater defects in HBMEC invasion with the OmpA mutant (9), but these different results may stem from experimental variations, including use of different HBMEC and different OmpA mutants. These findings illustrate the importance of using the same experimental conditions for assessing and comparing the contributions of different E. coli structures to HBMEC association and invasion. Taken together, these findings indicate that the contributions of type 1 fimbriae and OmpA to E. coli K1 binding to and invasion of HBMEC are independent of each other and at least partially additive. These findings are consistent with our finding that despite similar levels of type 1 fimbria expression, the mutant derived by deletion of ompA from the locked-ON mutant exhibited significantly decreased association and invasion rates compared to the locked-ON mutant. We have previously shown that E. coli K1 association with and invasion of HBMEC involve several signaling pathways, such as phosphatidylinositol 3-kinase and RhoA (9, 10, 23, 24). We have shown that OmpA activates phosphatidylinositol 3-kinase in HBMEC, but not RhoA (9). Our preliminary data revealed that type 1 fimbriae activate RhoA in HBMEC (10a). Taken together, these findings suggest that OmpA and type 1 fimbriae contribute to E. coli K1 binding to and invasion of HBMEC in an additive manner, perhaps by using diverse signaling pathways.
In summary, we showed for the first time that the deletion of ompA decreased the expression of type 1 fimbriae by affecting the fim promoter orientation. The contribution of OmpA to E. coli K1 association with and invasion of HBMEC was, however, in part independent of type 1 fimbriae. We have previously shown that the OmpA mutant of E. coli K1 strain RS218 was significantly defective in penetration into the central nervous system (CNS) in vivo compared to the parent strain (34). We also showed that a high degree of bacteremia and binding to HBMEC are involved in E. coli K1 penetration into the CNS. Type 1 fimbriated E. coli has been shown to be less efficient in induction of a high degree of bacteremia (25) but has been shown to more efficient in binding to HBMEC (32). In addition, previous studies have shown that type 1 fimbriated E. coli was present in infant rat blood at 6 h after intraperitoneal administration of E. coli K1 (25). At present, the role of type 1 fimbriae in the pathogenesis of E. coli meningitis has not been clarified. Studies are in progress to determine whether or not the in vivo CNS penetration defect of the OmpA mutant is related to its effect on decreased expression of type 1 fimbriae.
This work was supported by NIH grants.
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