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Department of Biochemistry and Health Graduate Program, Federal University of Rio Grande do Norte, Natal, RN, Brazil,1 Department of Biochemistry, University of Iowa,2 Departments of Internal Medicine, Microbiology, and Epidemiology, University of Iowa and Veterans' Administration Medical Center, Iowa City, Iowa 522423
Received 17 December 2005/ Returned for modification 21 January 2006/ Accepted 15 September 2006
| ABSTRACT |
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, kinesin K39, repetitive protein A2, and a hypothetical conserved protein. Humans naturally infected with L. chagasi mounted both cellular and antibody responses to these proteins. Preparations containing multiple antigens may be optimal for immunodiagnosis and protective vaccines. | INTRODUCTION |
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When visceral leishmaniasis was first reported in the northeastern region of Brazil in 1936, most cases occurred sporadically in poor, rural farming areas (21). Due to population shifts as Brazil has become more urbanized, visceral leishmaniasis has emerged as an important health problem in the outskirts of large Brazilian cities, where thousands of people are now at risk of infection and disease (17, 31). The spectrum of manifestations due to L. chagasi infection includes at one end self-resolving infection detected by a positive delayed-type hypersensitivity (DTH) skin test response to leishmania antigen (Montenegro test) and/or antigen-specific peripheral T-cell responses in the absence of symptomatic disease. At the other end of the spectrum is symptomatic visceral leishmaniasis, a severe and potentially fatal illness in which there are high titers of antileishmanial antibodies but DTH responses are absent (45). Antibody levels decrease and specific DTH responses develop after successful treatment of the disease (5).
Antileishmanial drug treatment is problematic in that leishmanicidal drugs are toxic and costly and drug resistance is emerging, particularly in India (19, 52). Standard diagnostic procedures identifying the parasite are invasive with potential complications, and the specificity of serologic diagnosis for acute disease varies in endemic populations (5, 19). Individuals develop immunity against reinfection after clinical recovery from leishmaniasis (30, 42), suggesting that in principle vaccination is feasible. Indeed, for years individuals were "immunized" against Old World cutaneous leishmaniasis by purposeful infection with one species of Leishmania to protect against infection with another (42, 46). Despite the obvious need and considerable effort, however, there is no effective and safe vaccine approved for human use against any form of leishmaniasis. Similarly, no effective vaccine has been developed for dogs, which serve as a major reservoir for leishmaniasis in peridomestic settings of Latin America.
The Leishmania spp. protozoa are complex eukaryotic organisms that pass through both an insect (sand fly) and a mammalian host in two distinct morphological forms (promastigote and amastigote, respectively). Promastigotes modify their antigenic properties in culture, a fact that may hamper efforts to generate attenuated or gene knockout mutants as live Leishmania vaccine strains (3, 36, 51, 56). Furthermore, host immune responses occur to antigens expressed by the intracellular amastigote stage, which is difficult to raise in bulk culture (32, 57). We therefore focused on identifying antigens expressed in amastigotes that elicit immunological responses in infected hosts.
It seems likely that both a subunit vaccine and an optimized diagnostic test would benefit from inclusion of a broad range of parasite epitopes. There are many reports of antigens expressed by the promastigote (insect) stage of Leishmania that are recognized by the mammalian immune system (34). Some studies focus on antigens that are highly expressed in the intracellular amastigote, the stage present throughout mammalian infection (23, 25, 44, 49, 59). This report documents our systematic screen of an L. chagasi amastigote cDNA library to identify T-cell and T-cell-dependent B-cell antigens expressed in the mammalian parasite form.
| MATERIALS AND METHODS |
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Preparation and serum screening of the amastigote cDNA library. Total RNA was extracted from a pool of 1.2 x 109 amastigotes derived from 11 infected hamster spleens and used to generate a cDNA library in lambda ZAP II using a cDNA library construction kit as described by the manufacturer (Stratagene, La Jolla, CA). The library was initially immunoscreened with pooled sera from 11 Brazilian patients with visceral leishmaniasis by using standard methods (16). Patients with visceral leishmaniasis were defined by typical clinical presentation, parasite identification on bone marrow biopsy, and response to treatment (31). A total of 100,000 phage clones were screened with the serum pool followed by a secondary peroxidase-conjugated anti-human immunoglobulin G (IgG) and peroxidase substrate (4-Cl-naphthol, imidazole, and H2O2). Recombinant phages were purified in a third immunoscreen.
Phage clones encoding HSP70 or HSP90 were eliminated, since these seemed unlikely to be chosen for a vaccine. To identify these clones, the selected antigenic phages were plated in a grid and screened with [32P]DNA probes containing the sequences encoding L. chagasi HSP90 and HSP70. Probes were the HSP90-3 sequence comprising the 3' 1,359 bp of the coding region and the entire 858-bp 3'-untranslated region reported in our prior publications (20, 55) and a full-length HSP70 cDNA of 1,858 bp cloned from an L. chagasi stationary-phase promastigote cDNA library.
Screen for T-cell antigens. Fusion proteins were prepared for T-cell assays using a method modified from that described by Mustafa et al. (40). Briefly, phage clones were plated into individual wells of a 96-well plate in SM medium and transferred to a second plate containing Escherichia coli XL1 Blue (Stratagene) using a multiwell pipettor. Bacteria were transformed at 37°C and transferred to a third plate containing 0.7% LB agar with 10 mM isopropyl-ß-D-thiogalactoside (IPTG) and top agar. Top agar containing transformed bacteria was plated in 1.5% LB agar of a fourth plate. After incubation at 42°C for 4 hours, plates were incubated overnight at 37°C to allow expression of recombinant antigens. Wells were subsequently overlaid with RPMI 1640 medium containing 100 U of penicillin/ml, 100 µg of streptomycin/ml, and 10 µg of polymyxin B/ml. Recombinant fusion proteins were allowed to diffuse into the medium over 1 hour. Protein-containing supernatants were incorporated into replicate splenocyte proliferation assays at a 1:100 dilution. Negative control wells contained agar with no bacteria or top agar with nontransformed E. coli.
C3H.HeJ mice were infected with 107 L. chagasi promastigotes intravenously through a tail vein. Two weeks later spleens were removed from five infected mice, pooled, and made into single-cell suspensions by passage through a wire screen. B cells were removed by panning on anti-immunoglobulin, and T cells were partially purified over a nylon wool column (16, 59). This yielded a population with 60 ± 1% CD4+, 32% ± 2% CD8+, and 2.3 ± 0.7% B220+ cells (means ± standard deviations) according to fluorescence-activated cell sorter analysis. Splenocytes from uninfected syngeneic mice were treated with mitomycin C and used as a source of antigen-presenting cells.
A total of 2 x 105 column-purified T cells and 2 x 104 mitomycin C-treated splenocytes were incubated in wells at 37°C, 5% CO2. Four replicate plates contained supernatants containing recombinant proteins or the following negative controls: no supernatant, supernatant from wells with no bacteria, or supernatant from wells with negative recombinant phage clones that did not encode a protein recognized on the immunoscreen. Positive control wells contained 1 x 106 promastigotes/ml as a source of live parasite antigen. After 68 to 92 h, wells were pulsed with 0.5 µCi of [3H]thymidine/well and incubated for an additional 4 h. Stimulation indices were calculated as the ratio of [3H]thymidine incorporated in wells with recombinant proteins compared to wells containing supernatant overlaid on agarose without bacteria. The 72-hour supernatants were collected for gamma interferon (IFN-
) assay.
Murine IFN-
ELISAs.
Murine IFN-
was measured using a sandwich enzyme-linked immunosorbent assay (ELISA) as we have previously reported (59). Briefly, plates were coated with monoclonal antibody (MAb) HB170 (ATCC) and incubated with 50 µl supernatant. IFN-
was detected with polyclonal rabbit anti-IFN-
followed by biotinylated goat anti-rabbit IgG (Accurate Chemical Co., Westbury, NY), streptavidin-horseradish peroxidase (HRP), and 2,2'-azinobis(ethylbenzthiazolinesulfonic acid) substrate (ABTS; Zymed, San Francisco, CA).
Preparation of recombinant proteins. Genes encoding the above antigens, as well as the gene encoding promastigote protein KMP11 (12), were subcloned into the pQE30 expression vector (QIAGEN, Valencia, CA) in frame with an N-terminal His6 tag under control of the lacO operator. Protein expression was verified by sodium dodecyl sulfate (SDS)-polyacrylamide gel electrophoresis and Coomassie blue staining. Lysates with predominant bands of the correct size were assayed for reactivity with pooled antileishmania serum on immunoblots. Recombinant proteins were purified from the lysate on nickel-nitrilotriacetic acid resin and eluted with imidazole. All procedures were performed as suggested by the manufacturer. Eluted proteins were analyzed for purity by sodium dodecyl sulfate-polyacrylamide gel electrophoresis and Coomassie blue stain.
Human cellular immune responses to recombinant proteins.
Peripheral blood mononuclear cells (PBMCs) were isolated on a Ficoll-Hypaque gradient from nonexposed control individuals (n = 3) or from individuals with immunity to L. chagasi as documented by a positive DTH skin test reaction either because of prior successful treatment of active disease (n = 3) or prior subclinical infection and residence in an household where is was endemic (n = 3). PBMCs were resuspended in RPMI 1640 culture medium (Gibco BRL, Grand Island, NY) supplemented with 10% human AB serum, 100 µg of streptomycin/ml, and 100 IU of penicillin/ml. Five hundred µl of PBMCs (2 x 106 cells/ml) was plated in 24-well plates and stimulated with L. chagasi lysate (5 µg/ml), recombinant KMP11 as a positive control (5 µg/ml), recombinant 503 (5 µg/ml), or recombinant 419 (5 µg/ml). PBMCs were incubated for 72 h at 37°C, 5% CO2, after which supernatants were collected and stored at 70°C. IFN-
in supernatants was measured by the ELISA sandwich method (R&D Systems, Minneapolis, MN). The results are shown in pg/ml.
Recombinant protein enzyme-linked immunosorbent assays. Microassay plates (Costar, Cambridge, MA) were coated overnight at 4°C with 500 ng/well recombinant L. chagasi amastigote antigens from clones 314, 503, and 419 in coating buffer, blocked with 1% Tween 20-phosphate-buffered saline, and washed in 0.1% Tween 20. Sera from 34 individuals with parasitologically confirmed visceral leishmaniasis and a positive response to recombinant K39 serology were incubated in wells at a 1:500 dilution for 1 h at room temperature. Specific antibody binding was detected with 1:4,000 anti-human IgG-horseradish peroxidase (Promega, Madison, WI) followed by substrate (ABTS, pH 4.2; Sigma, St. Louis, MO), detected based on the absorbance at 405 nm. The cutoff for a positive reaction was set at the mean + 3 standard deviations of the absorbance control sera (n = 3). Each serum sample was assayed in duplicate.
DNA sequencing and alignment. Non-HSP cDNA clones selected with the above double screen were excised into pBluescript SK(+/) as described by the manufacturer. Inserts were sequenced using a series of primers designed from the vector and preliminary sequence data, using automated fluorescent DNA sequencing at the University of Iowa DNA Core Facility (33). Replicate sequences were aligned with homologues identified from the Sanger Centre website and the National Center for Biotechnology Information (NCBI) website (GenBank). Alignments were done using the Vector NTI Advance sequence analysis program (Invitrogen, Bethesda, MD).
Immunoblot assays. LcJ promastigotes in logarithmic or stationary growth phase or LcJ axenic amastigotes were collected by centrifugation and resuspended in 200 µl of Hanks' balanced salts solution. Protein concentrations were determined by Pierce BCA protein assay, and proteins were separated on 7.5% polyacrylamide reducing gels. Proteins were transferred to a polyvinylidene difluoride membrane, stained with Ponceau S to verify equal loading, and blocked with 5% dry milk and 0.05% Tween 20 in phosphate-buffered saline. Blots were incubated with pooled serum from patients with visceral leishmaniasis (1:2,500 dilution) followed by 1:20,000 peroxidase-conjugated anti-human IgG. After washing, membranes were developed by chemiluminescence (ECL; Amersham Pharmacia Biotech, Buckinghamshire, England).
Immunoblots of purified recombinant proteins (50 µg/lane) were separated on 12% SDS-polyacrylamide gels, transferred to nitrocellulose, and incubated with serum from individual visceral leishmaniasis patients (1:100), followed by 1:1,000 peroxidase-conjugated anti-human IgG. Blots were developed with DAB-NiCl solution [Ni(II) chloride hexahydrate-3,3'-diaminobenzidine tetrahydrochloride; Sigma].
Northern blot assays.
Total mRNA was extracted from LcJ promastigotes in logarithmic or stationary growth phase or from axenic amastigotes (15). RNA was separated on formaldehyde-1.2% agarose gels and transferred by capillary action to nylon membranes. Blots were hybridized with gel-purified inserts corresponding to screen-selected cDNA clones and labeled with [
-32P]dCTP by random priming (2). Hybridization with the L. chagasi
-tubulin coding sequence was used as a loading control.
| RESULTS |
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The ends of the cDNA inserts from the 11 clones were sequenced. Three encoded heat shock proteins (two HSP70 and one HSP83) were not recognized in the above hybridization screen. One was found to encode ribosomal protein P0 and was eliminated from further analysis because it might cross-react with the mammalian protein. A final clone was eliminated due its small insert size.
Table 2 shows the results of proliferation indices and IFN-
levels released into supernatants upon stimulation with the remaining six clones studied and for a negative clone that did not generate a recombinant protein recognized by antiserum in the first screen. The positive control for proliferation was live leishmania promastigote antigen.
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(EF-1
), and Leishmania repetitive protein A2.
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Northern blot assays.
Because the original cDNA library was constructed from hamster-derived amastigotes, there was the potential that the selected clones were of hamster origin. As such, expression of these antigens by axenically grown L. chagasi parasite stages was verified on Northern blot assays of promastigotes (log and stationary phase) and axenic amastigotes. Total RNAs from wild-type L. chagasi promastigotes, LcJ promastigotes in the logarithmic and stationary phase of growth, or LcJ amastigotes were hybridized with cDNA inserts corresponding to each of the recombinant clones (Fig. 3). The
-tubulin coding region of L. chagasi served as a loading control. The slower migration of the mRNAs compared to the observed sizes of open reading frames likely corresponds to the lengths of the 5' and 3' untranslated regions on the mRNAs.
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) displayed higher levels of expression during the logarithmic phase of growth, and 419 mRNA was low in amastigotes. As expected, the mRNA derived from clone 648, which corresponds to one of the L. chagasi A2 genes, was much more highly expressed in the amastigote than the promastigote stage. Nonetheless, all antigens are expressed in amastigotes and, as such, constitute potential targets for the immune response during mammalian infection. Human immune responses to recombinant antigens. The predicted sizes of peptides were compared to proteins observed on immunoblots of bacterial lysates containing recombinant phage and induced with IPTG. Recombinant proteins in these lysates were recognized by a pool of sera from visceral leishmaniasis patients (Fig. 4A). The sizes of the fragments recognized by human immune sera were compatible with estimated sizes predicted from the cDNA sequences. These were visualized among background E. coli bands also recognized by the human sera. Unique bands were not visible in lanes containing transformants harboring clones 319 and 648, possibly due to low-level expression. The lack of full correspondence between predicted and observed sizes of recombinant proteins in Table 3 could be due to folding or to modifications of proteins expressed in bacteria.
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To test a larger number of sera, we designed ELISAs for the three recombinant antigens (Fig. 5). All sera had already tested positive for recombinant K39 antigen, the antigen used in commercial dipstick tests (19). We previously showed that this antigen has a sensitivity of 94.7% and specificity of 98.3% in a Brazilian population (5). Negative reactions were defined using sera from individuals never exposed in the region endemic for L. chagasi.
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Cellular immune assays were performed with two recombinant antigens (Table 4). Two of six individuals tested responded to parasite lysate with IFN-
(mean, 64.2 ± 10.4 ng/ml), two of six secreted IFN-
when stimulated with a control antigen, KMP11 (mean, 8.4 ± 0.7 pg/ml) (12), three of six responded to antigen 419 with IFN-'
(mean, 10.9 ± 6.0 pg/ml), and one of six responded to antigen 503 by release of IFN-
(16.8 pg/ml). Overall, the selected antigens yielded serologic and/or cytokine responses in all humans naturally infected with L. chagasi that were tested.
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| DISCUSSION |
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The diagnosis of visceral leishmaniasis is hampered by the lack of a prompt diagnostic method. The "gold standard" diagnostic procedure is still the parasitological confirmation in specimens collected either from spleen or bone marrow aspirates. Serologic diagnosis with rK39 antigen strips varies from 67 to 100% sensitivity and 93 to 100% specificity. In Brazil and in our hands, the rK39 ELISA has proven a very efficient means of diagnosis, whereas in India there have been cases of weak positive responses after cure or false-positive responses in healthy persons with the rK39 dipstick test (5, 19).
Although there are no currently approved human or canine vaccines against leishmaniasis, cure of disease results in long-term protective immunity to reinfection in normal hosts (42). There is considerable interest in development of an antileishmanial vaccine that will mimic this natural protective immunity. Human trials with parasite antigen preparations with or without BCG adjuvant have been disappointing (1). Several alternate vaccination strategies, many based on strategies to deliver a subunit vaccine, are under consideration. Because the Leishmania spp. are complex protozoa able to modify their antigenic characteristics in vitro and in vivo (18), it seems likely that a cocktail of antigens must be included if a subunit vaccine is to be effective.
Antigens that might be appropriate for a subunit vaccine or for diagnostic purposes have been identified through a variety of approaches, including differential expression in parasite stages or recognition by antibodies and T cells (reviewed in reference 34). We reasoned that the field would benefit from a systematic screen for T-cell antigens and T-dependent B-cell antigens expressed in the intracellular amastigote stage of the parasite, the stage present in the mammalian host. Therefore, the aim of the present study was to conduct such a screen of an L. chagasi amastigote cDNA library.
We patterned a two-step library screening procedure after the method of Mustafa et al. (40). Individuals with acute visceral leishmaniasis develop a polyclonal B-cell response generating antibodies to a large number of parasite antigens (22). Therefore, our L. chagasi amastigote cDNA library was first immunoscreened with pooled serum from Brazilians with visceral leishmaniasis to select as many clones producing recombinant parasite proteins as possible. Once accomplished, we eliminated heat shock proteins by cross-hybridization, since we reasoned that the ubiquitous nature of heat shock proteins would limit their potential utility in vaccines. Among the 242 clones identified in the first screen, 49% encoded members of the heat shock protein HSP70, HSP86, and HSP90 families. This represented a marked enrichment over the 0.76% frequency of these sequences in the general library.
The remaining non-heat shock proteins were subjected to a secondary screen for their ability to efficiently induce a T-cell response. The "probe" consisted of purified T lymphocytes from a mouse strain that is resistant to L. chagasi infection and which is genetically nonresponsive to LPS due to a mutation in the TLR4 gene (53). In initial assays, 20 clones (16% of the total) were identified for their ability to cause proliferation. After eliminating clones for which the proliferation response was not replicated, residual heat shock proteins missed on the hybridization screen, and a ribosomal structural protein, six unique clones encoding proteins that repeatedly stimulated lymphocyte responses in all assays were chosen for further study.
The choice of murine T cells for the secondary screen warrants some discussion. There are clearly differences between human and murine lymphocyte responses. We chose to screen for murine responses because of the availability of LPS-hyporesponsive mouse strains and the confounding influence that LPS contaminating the recombinant proteins would undoubtedly cause when incubated with human T lymphocytes. The fact that we selected homologues of two antigens of interest in the literature, i.e., a homologue of K39 which induces B-cell responses during acute visceral leishmaniasis, and A2, which causes protective immunity in mice, served as a positive validation that the screen was successful in picking potentially useful antigens. The selection of an A2 gene that diverges from that used in prior immunization studies through this unbiased screen (Fig. 3) indicates its potential validity as a vaccine candidate.
The literature contains reports of many antigens that induce type 1 immune responses and/or protect against parasites causing cutaneous leishmaniasis (e.g., L. major and L. amazonensis). Immunization of genetically susceptible BALB/c mice with L. major LACK (Leishmania homologue of mammalian RACKs receptors for activated C kinase) was effective in protecting BALB/c mice against progressive L. major infection (28). LeIF, a Leishmania species gene with homology to eukaryotic ribosomal protein eIF4A, is a potent stimulus of IFN-
production by T lymphocytes from lymph nodes draining L. major in BALB/c mice (48). A cocktail vaccine containing LeIF, LmSTI1, and TSA induced protection in both murine and nonhuman primate models of cutaneous leishmaniasis (9). Other proteins that induce potentially protective T-cell responses in models of cutaneous leishmaniasis have included GP63 (54), WD protein (8), GP46 (PSA) (13), P4 (7), P8 (49), and PSA-2 (29), among others (26, 34).
Antigens from the parasites causing visceral leishmaniasis have also been reported to induce partial protective immunity. Immunization of mice with killed L. donovani crude antigen fractions, purified dp72 and gp70-2 L. donovani membrane proteins (43), recombinant LCR1 (59), Ldp23 (10), A2 (25), or HASPB1 (50) offered partial protection against parasite challenge. A2, which was also identified in our screen, includes a group of proteins expressed exclusively in amastigotes with an as-yet-elusive function (24). L. infantum A2 proteins contain repeated peptide epitopes varying from 10 to 90 in different A2 genes (60). Parasites causing cutaneous leishmaniasis (L. major, L. tropica, and L. braziliensis) contain A2 homologues that lack the repeated sequences (23). Somewhat predictably, immunization with A2 protects against L. donovani but not L. major infections in mice (25), whereas LACK protects against L. major but not L. donovani infections (38). A2 and LACK may therefore represent species-specific antigens that influence the course of visceral or cutaneous leishmaniasis but might be "ignored" during the immune response to parasites causing the other clinical form.
Among the six L. chagasi amastigote antigens identified in this study, A2 was exclusively expressed in amastigotes and the mRNAs for three other proteins (EF-1
[11], ER ATPase, and a conserved hypothetical protein) were represented more highly in logarithmic- than stationary-phase promastigotes. It should be mentioned that clone 503 is not the same as the elongation factor (EF-1
) previously reported to be released from the parasitophorous vacuole into the infected macrophage cytoplasm (41). Glutamine synthetase and the homologue of K39 (6) were expressed similarly between the stages. As with other Leishmania spp. genes, the level of mRNA expression is not necessarily expected to correlate with protein abundance.
It is remarkable that the antigens recognized by T cells are not all predicted to localize on the promastigote surface or be secreted. Indeed, glutamine synthetase and EF-1
might be primarily cytoplasmic, ER ATPase might localize to organelles, and K39 might be found in the cytoplasm or cytoskeleton. It is possible that small amounts of glutamine synthetase are expressed on the parasite surface, and A2 might be secreted. Nonetheless, it is possible that intracellular parasites release more antigens into the dendritic cell or macrophage antigen presentation pathways than we have as yet appreciated.
Humans naturally exposed to L. chagasi mounted both humoral and cellular responses to some of the above antigens. The fact that no one antigen elicited responses in all exposed persons, whether symptomatic or asymptomatic, underscores the fact that a vaccine formulation, and possibly an optimized diagnostic test, may require a mixture of parasite antigens to induce or detect an immune response. Further studies are clearly needed to characterize the efficacy of individual amastigote antigens, or the combination of antigens, in inducing both humoral and cellular immune responses in infected humans from regions where it is endemic.
| ACKNOWLEDGMENTS |
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We thank Betty Young for technical support.
We disclose a patent application regarding vaccine development using data reported in this work.
| FOOTNOTES |
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Published ahead of print on 25 September 2006. ![]()
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