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Infection and Immunity, February 2006, p. 896-903, Vol. 74, No. 2
0019-9567/06/$08.00+0 doi:10.1128/IAI.74.2.896-903.2006
Copyright © 2006, American Society for Microbiology. All Rights Reserved.
Department of Microbiology, All India Institute of Medical Sciences, New Delhi, India,1 Microbiology and Immunology,2 Department of Medicine, Albert Einstein College of Medicine, Bronx, New York 104613
Received 6 September 2005/ Returned for modification 31 October 2005/ Accepted 8 November 2005
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We have previously shown that serotype A and D strains can undergo phenotypic switching from a smooth parent variant to more virulent mucoid or wrinkled colony variants (17). Furthermore, switches to a mucoid colony variant during chronic murine infections were associated with poor outcomes (16). Phenotypic switching only occurs in a subpopulation, and therefore a switch variant has to be selected by the host to become dominant (14, 16). In the setting of infection with a switching strain, antifungal interventions can select for the mucoid variant (13). This is relevant because frequent treatment failures in immunocompromised hosts generally are the result of persistence of the initial strain despite standard therapy (1, 2, 34). The relevance of phenotypic switching in infection with C. neoformans var. gattii is not known, but these infections often require more prolonged antifungal therapy and are associated with neurological sequelae and a higher frequency of neurosurgical interventions than those due to serotype A and D isolates (42).
Incoming mycological clinical specimens at All India Institute of Medical Sciences were typed by molecular typing methods and screened for colony variation (20). Five of 57 clinical isolates were found to be serotype B. One of these serotype B strains exhibited both smooth and mucoid colonies on the original plate that was inoculated with a patient's cerebrospinal fluid (CSF). We now present findings on this C. neoformans var. gattii strain that reversibly switches between its mucoid parent variant and a smooth colony morphology. Similar to the case with serotype A and D strains, the switch is associated with changes in the polysaccharide capsule and the cell wall. Most importantly, in murine infection models, the phenotypic switch to a smooth colony permits dissemination to the central nervous system (CNS), which has important implications for pathogenesis. In contrast to the serotype A and D strains, the serotype B strain switches in vivo reversibly between the mucoid and smooth variants. The colony variant that dominates the pathogen population is dependent on the local microenvironment promoting selection.
(Part of the work presented herein is part of the Ph.D. thesis work of N.J. at Jiwaji University, and All India Institute of Medical Sciences.)
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Molecular characterization of NP1-SM and -MC.
Random amplified polymorphic DNA (RAPD) analysis was done by a PCR-based method using the mini-satellite-specific core sequence of the wild-type phage M13 as previously described (28). Restriction fragment length polymorphism (RFLP) analysis was performed as described previously, with a C. neoformans-specific transposon sequence (TCN-1) (20, 21). The TCN-1 probe (634 bp) was amplified from cryptococcal DNA with specific primers (TCN1.F.2 [5'-TCATGTCAGGTCCTTCCACTCGTAG-3'] and TCN1.R.2 [5'-CATAAACTTGGGCTGGGGATCG-3']). The amplicon was cloned, purified, and labeled with [
-32P]dCTP, using a High Prime DNA labeling kit (Boehringer, Mannheim, Germany). For karyotype analysis, chromosomal DNA plugs were prepared from cultures derived from single colonies as described previously (12).
Phenotypic characterization. Doubling times were determined by optical density measurements and manual counting of diluted suspensions in Sabouraud dextrose (SD) broth and in cell culture medium (Dulbecco's modified Eagle's medium [DMEM] with 5% fetal calf serum [FCS]). Melanization was determined with Sabouraud dextrose agar (SDA) plates supplemented with 1 µM L-dopa. MICs of fluconazole and amphotericin B for both variants were determined by microdilution and E tests per standard laboratory protocols. Capsule size was measured with C. neoformans cells from 24-h cultures in SD broth or with cells in lung homogenates 24 h after intratracheal (i.t.) injection or 3 h after intravenous (i.v.) injection in brain homogenates. Yeast cells were suspended in India ink (Becton Dickinson, NJ) and visualized at a magnification of x1,000 with an Olympus AX70 microscope. Images were captured with a QImaging Retiga 1300 digital camera using QCapture suite V2.46 software (QImaging, Burnaby, BC, Canada). Capsule measurements were made with 25 randomly chosen cells from each strain, using Adobe Photoshop 7.0 for Windows, and the capsule thickness was calculated using the conversion of 45 pixels to 1 micrometer. The capsules of the NP1-SM and -MC yeast cells were stained with the monoclonal antibody (MAb) 18B7 to glucuronoxylomannan (GXM) and visualized with a fluorescein isothiocyanate-labeled sheep antibody to mouse immunoglobulin G as previously described (32). The viscosity of GXM dissolved in water and phosphate-buffered saline (PBS) were measured using a capillary viscometer (Technical Glass Products, Inc., Dover, NJ).
Resistance to temperature, osmotic stresses, and lysing enzyme. NP1-SM and -MC were grown for 2 days at 30°C, suspended in PBS at 5 x 103 cells per ml, and either frozen overnight at 20°C or heated to 45°C for 30 min, 45 min, and 1 h or 50°C for 5 min. Ten microliters of suspension was plated on SDA plates to calculate the survival fraction relative to that of a control suspension. To compare the abilities of cells to tolerate high osmotic pressure, NP1-SM and -MC were grown on SDA plates supplemented with 1 M NaCl, 1 M sorbitol, or 10 mM glycerol. Sensitivities to lysing enzyme were determined by incubating NP1-SM and NP1-MC cells in sorbitol-sodium citrate buffer with different concentrations (96 µg/ml to 0.35 µg/ml) of lysing enzyme (from Trichoderma harzianum; Sigma Aldrich, St. Louis, Mo.) at 37°C. Every 15 min, cells were exposed to 2% sodium dodecyl sulfate to monitor the lysis of yeast cells under magnification (x400). The concentration of enzyme at which >80% of cells were lysed compared to control cells (incubated without lysing enzyme) was determined.
Analysis of GXM. GXM purification and determination of its chemotype were done as previously described (8, 9). Prior to nuclear magnetic resonance (NMR) spectroscopy, GXM was sonicated and exchanged in 99.99% D2O (Cambridge Isotope Laboratories, Andover, MA). 1H chemical shifts were measured relative to the methyl groups of sodium 4,4-demethyl-4-silapentane-1-sulfonate taken at 0.00 ppm. Spectroscopy was done with a Bruker DRX600 NMR spectrometer (600 MHz) in our NMR facility. The viscosity of GXM dissolved in water and PBS was measured by using a capillary viscometer (Technical Glass Products, Inc., Dover, NJ) and determining the time the liquid took to fall a specific distance.
Animal studies. BALB/c and SCID/BALB/c mice (male, 6 to 12 weeks old) were obtained from the National Cancer Institute (Bethesda, MD). Mice (n = 5 to 7 per group) were infected i.t. or i.v. via the tail vein. NP1-SM and NP1-MC were grown for 24 h in SD broth washed twice with PBS. For i.t. infections, mice were anesthetized and injected in the trachea with 5 x 106 C. neoformans cells in 50 µl sterile PBS using a 26-gauge needle. For i.v. infections, mice were infected with 1 x 106 to 5 x 106 cells in 100 µl PBS. Dilutions of the inoculum were plated onto SDA to ensure that comparable numbers of yeast cells were injected and that the colony phenotypes were stable. Mice were observed daily for signs of disease. Mice were killed by cervical dislocation after anesthesia, and organ CFU were determined at 14 days postinfection by homogenizing lung and brain tissue in PBS and plating 100 µl of different dilutions on SDA. Colonies were counted after 72 to 96 h. For histology and immunohistochemistry, mice were anesthetized and perfused with 4% paraformaldehyde in PBS for fixation under constant pressure, and tissue sections were stained with hematoxylin and eosin or mucicarmine.
Determination of in vivo switching of SM to MC phenotype. For calculations of switching frequencies, a single colony of NP1-SM or -MC that was grown overnight in SD broth or organ homogenates were plated on SDA plates (200 to 300 colonies per plate). The in vitro switching rate of NP1-SM to the MC colony phenotype or vice versa was determined by visually scoring 104 colonies after growth on SDA plates. For in vivo switching rates, the percentages of colonies of the total CFU with MC relative to SM morphology were determined.
Phagocytosis and killing assays. In vitro killing assays were performed with the murine macrophage-like cell line J774.16 (ATCC, Rockville, MD) (30, 45). C. neoformans var. gattii cells were added at a 1:5 ratio to cells with MAb 18B7 and coincubated with macrophages in DMEM supplemented with 5% FCS at 37°C for 2 h. The cell layers were then washed with PBS to remove nonadherent yeast cells and further incubated with cell culture medium or stained with Giemsa Wright stain after fixation with methanol. The starting phagocytosis index (PI) was determined by microscopy as follows: PI = number of yeast in macrophages/number of macrophages. The medium was replaced with medium that contained no MAb to avoid further phagocytosis, which was not observed with complement only. The mixture was incubated for 36 h at 37°C in 10% CO2. The ability of NP1-SM and -MC to replicate in J774 cells was determined by counting the CFU of C. neoformans var. gattii after it was cocultured with macrophages in the presence (intracellular growth) and absence (extracellular growth) of MAb 18B7. After 16 and 36 h, the supernatants of the wells were removed and separated in sterile tubes. Cells were lysed by incubation in sterile water and repeated vigorous aspiration with a pipette to complete the disruption. Supernatants and lysates were plated in different dilutions on SDA to determine the CFU and percent killing relative to yeast cells that grew extracellularly in the same medium.
Transmigration of blood-brain barrier. A murine model of i.v. infection was used to study crossing of the blood-brain barrier by NP1-SM and -MC. The cells were grown in SD broth at 37°C for 20 h. Organisms were washed and counted, and NP1-SM cells were sonicated twice for 15 s each time on ice to disperse clumps. BALB/c mice (seven per group) were infected i.v. with 5 x 106 cells. The inoculum size and colony morphology were verified by backplating dilutions of the inoculum onto SDA plates. After 3 h, the mice were anesthetized and perfused by injecting 30 ml sterile PBS into the left ventricle. The right atrium was cut open to allow drainage during the procedure. The brains were removed and homogenized in sterile PBS on SDA plates to determine the CFU per brain.
Statistical analysis. The student t test and the Kruskal-Wallis test were used to compare cell sizes, capsule sizes, and log-transformed fungal burdens (with the statistical program Primer). SPSS, version 8.0 (SPSS Inc., Chicago IL), was used to generate Kaplan-Meier survival curves.
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TABLE 1. Phenotypic characteristics of NP1-SM and NP1-MC
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FIG. 1. (a) Molecular characterization demonstrates that NP1-SM and -MC are switch variants of the same C. neoformans var. gattii strain (NP1). The left panel shows by RAPD analysis that both variants are VGII, consistent with their varietal status. The middle panel demonstrates identical RFLP patterns, and the right panel shows identical karyotype patterns for the SM and MC variants of NP1. (b) NP1-MC (upper panels) and NP1-SM (lower panels) colonies. From the left, the panels show the following: first column, comparison of colony morphologies; second column, capsule sizes in vivo; and third column, staining patterns with a GXM-specific MAb (18B7).
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Virulence studies. The virulence levels of the NP1-SM and -MC variants were compared in BALB/c mice in i.t. and i.v. infection models. The measures of virulence were organ CFU and survival. In both infection models, the NP1-MC variant was more virulent (Fig. 2a and b). Both routes of infection were lethal with the NP1-MC isolate. Mice infected i.t. with NP1-SM survived >100 days, and at that time, no CFU could be detected in the lungs or brains of the i.t. infected mice (Fig. 2a). Half of the mice infected i.v. with NP1-SM died of disseminated cryptococcosis (Fig. 2b). Consistent with the survival difference, the lung CFU on day 14 were significantly lower in NP1-SM- than in NP1-MC-infected mice (i.t. and i.v.) (Fig. 2c). The brain CFU were not different for NP1-SM- and -MC-infected mice (Fig. 2c). SCID mice infected i.t. with the NP1-SM or -MC variant also died and had comparable median survival rates. Interestingly, NP1-SM-infected SCID mice cleared the infection from the lungs but eventually died from disseminated CNS disease (data not shown).
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FIG. 2. Comparison of virulence of NP1-SM and NP1-MC in murine animal models. These studies show that NP1-SM-infected BALB/c mice live significantly longer than NP1-MC-infected BALB/c mice in a pulmonary infection model (P = 0.021) (a) as well as an intravenous infection model (P = 0.008) (b). (c) Consistent with these findings, significantly lower (P 0.03) CFU were found in the lungs of NP1-SM-infected (i.t. and i.v.) BALB/c mice on day 14.
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FIG. 3. Inflammatory responses in NP1-SM- and NP1-MC-infected mice. An extensive inflammatory response was detected in the lungs of NP1-SM (i.t.)-infected mice (a), whereas NP1-MC (i.t.)-infected mice exhibited a minimal inflammatory response and developed large cryptococcomas (b). A high magnification (HP) (x400) demonstrated more infiltration of mononuclear cells in the lung tissue of NP1-SM (c)- than of NP1-MC (d)-infected mice. In contrast, both NP1-SM- and NP1-MC-infected (i.v.) mice exhibited cryptococcomas (e and f) in the brain, although the cryptococcomas in the NP1-SM (e)-injected mice were smaller. Upon higher magnification (x200), it also appeared that NP1-SM elicited more inflammation in the brain (g) compared to the cryptococcomas in NP1-MC-infected mice (f and h). H&E, hematoxylin and eosin.
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FIG. 4. Both NP1-SM and NP1-MC undergo phenotypic switching. (a) For NP1-MC-infected mice, both SM (white arrow) and MC (black arrows) colonies are detected in lung homogenates. (b) In contrast, only SM colonies are detected in the brain homogenates of NP1-MC-infected mice.
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TABLE 2. Colony phenotypes in lung and brain homogenates
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Macrophages are the primary phagocytic cells in pulmonary cryptococcosis. Because NP1-MC dominated pulmonary infections, we performed phagocytosis and killing assays to test if these parameters were affected by the differences in the polysaccharide capsule. Most yeast cells were phagocytosed by macrophages after 2 h. Antibody-mediated phagocytosis by macrophages was comparable for NP1-SM and NP1-MC cells (PI of NP1-SM, 14.5 ± 3.6; PI of NP1-MC, 15 ± 8.3 [P = 0.86]). In contrast, intracellular survival was significantly better for NP1-MC cells than for NP1-SM cells 16 and 36 h after infection of macrophage cell layers (Fig. 5a). Hence, NP1-MC was more resistant to intracellular killing by macrophages. Consistent with these findings, we found yeast cells with large capsules in macrophages.
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FIG. 5. Selection pressures for NP1-SM and NP1-MC differ. (a) Cocultivation in a macrophage cell line demonstrated enhanced intracellular survival of the NP1-MC variant after 16 and 36 h compared to that of NP1-SM. Black bars denote yeast cells grown in the presence of macrophages that are not intracellular (no antibody added). White bars reflect the percentages of phagocytosed yeast cells killed after specific times. (b) Studies investigating transmigration across the blood-brain barrier demonstrated that significantly (P < 0.001; t test) more NP1-SM than NP1-MC colonies could be recovered from brains of i.v. injected mice.
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Phenotypic switching enables pathogens to undergo rapid microevolution and to adapt to different microenvironments (18, 27, 37, 38). For human pathogens, the host represents a microenvironment of particular interest, and phenotypic switching in this setting may affect the host-pathogen relationship with consequences that can translate into changes in virulence (4). An example of how phenotypic switching can alter the host-pathogen relationship is provided by Trypanosoma cruzi, where phenotypic switching generates antigenically different variants that can escape the antibody response (31). Interestingly, in encapsulated microbes, phenotypic switching often controls the expression of the capsule, which is pivotal in determining whether the microorganism becomes an invasive pathogen (35, 44). Encapsulated bacteria that cross the blood-brain barrier often have to change their cellular phenotype. For Streptococcus pneumoniae, transparent colonies contain less capsular polysaccharide and more cell wall phosphorylcholine than opaque colony variants and are associated with invasive disease (35).
For fungi, phenotypic switching was first described for Candida albicans over 20 years ago (39, 40) and has been extensively studied. In more recent years, phenotypic switching has also been demonstrated with other fungi, including C. neoformans (15-17). In all of the examined C. neoformans strains, phenotypic switching was associated with changes in the polysaccharide capsule, which constitutes a major virulence factor (3).
The NP1 switching system is reminiscent of the previously described RC-2 system, which is a serotype D strain that switches in vivo between smooth and mucoid colonies (16). Presumably, the parent strain in the serotype D strain is smooth and the mucoid colonies represent switch variants, whereas for the NP1 serotype B strain, the parent strain is more likely the mucoid variant. In both strains, the mucoid polysaccharide is very viscous, consistent with the shiny colony surface; however, detailed NMR analysis of the GXM structures of the NP1 variants could not elicit a difference in the repeat structure or in the degree of acetylation. Hence, the biochemical basis of the mucoid polysaccharide remains to be resolved. It is conceivable that phenotypic switching to the mucoid phenotype may provide the ubiquitous fungus C. neoformans var. gattii with a survival advantage in an immunocompetent host, where a fierce innate immune response with potent phagocytic cells would not permit colonization and infection.
C. neoformans is a facultative intracellular pathogen that employs similar survival strategies in mammalian and unicellular hosts, such as amoebae (11, 25, 43). Hence, changes in the polysaccharide capsule can either affect phagocytosis or prevent the rapid destruction of intracellular yeast cells by potent inflammatory cells such as host alveolar macrophages. This biological advantage of better intracellular survival may constitute a selection pressure that promotes the selection of NP1-MC variants in the lung after i.t. infection. Survival studies, fungal burdens, and histological examinations are consistent with this conclusion. In contrast to the MC variant of RC-2, NP1-MC did not elicit a damage-driven immune response but rather appeared to downregulate the immune response in the lung, as there was much less recruitment of inflammatory cells. Eventually, an accumulation of large cryptococcomas was observed in the lung, which is a finding commonly described for patients infected with C. neoformans var. gattii (42).
Our results also further our understanding of C. neoformans as a major cause of fungal meningitis in humans. The mechanisms underlying transversal from the circulation, across the blood-brain barrier, and into the subarachnoid space have been recently elucidated in two elegant studies (5, 6). Both studies concluded that crossing of the blood-brain barrier occurred early after inoculation at the level of the cortical capillaries. In addition, the second study established that the expression of antigenic epitopes in the polysaccharide capsule was modified to facilitate crossing of the blood-brain barrier (6). Other murine infection studies measuring in vivo capsule size in brain and lung tissue have also demonstrated a decreased cell size and capsule size of yeast cells in the brain compared to those of yeast cells recovered from the lungs (36). In NP1, the differences in cell and capsule size most likely contribute to the difference in migration. In addition, capsule size was more upregulated in vivo in NP1-MC cells than in NP1-SM cells. In this regard, we found more capsule induction in NP1-MC yeast cells in vivo. At the time of death, capsule sizes in the brains and lungs did not differ in NP1-MC-infected mice. The capsule size of yeast cells in the brains of NP1-MC-infected mice was larger than that in NP1-SM-infected mice. Interestingly, the colony morphology in NP1-MC-infected mice was smooth in brain homogenates, despite the large capsule. Hence, capsule size alone does not determine colony morphology.
In summary, phenotypic switching occurs in C. neoformans var. gattii (serotype B). Similar to the case with serotype A and D strains, the phenotypic switch is associated with changes in the polysaccharide capsule and changes in virulence. In contrast to the serotype A and D strains, the serotype B strain switches reversibly. We hypothesize that this occurs due to in vivo selection pressure for both variants. For NP1-MC, enhanced intracellular survival in macrophages selects the mucoid variant in the lungs, whereas better transmigration across the blood-brain barrier selects for NP1-SM in the CNS. Although smooth colonies are rarely observed with C. neoformans var. gattii strains, we hypothesize that this switch in colony morphology may represent a "locked in" phenotype that may normally be transient and thus not detected. Hence, this strain may serve as a tool to identify genes that are regulated during in vivo infection and affect capsule induction and transmigration across the blood-brain barrier.
This work was supported by grant R0-1 AI 59681 to B.C.F. and by a grant from the AIDS International Training and Research Program of the Albert Einstein College of Medicine (program director, Vinayak Prasad [NID D43-TW01403]) to U.B. and N.J. Furthermore, N.J. is thankful to ICMR (80/500/ECD-1/2003) for a senior research fellowship.
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