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Infection and Immunity, June 2006, p. 3125-3133, Vol. 74, No. 6
0019-9567/06/$08.00+0 doi:10.1128/IAI.02061-05
Copyright © 2006, American Society for Microbiology. All Rights Reserved.
Rosa Kim,1
Dana Beery,1 and
Lalita Ramakrishnan1,2,3
Departments of Microbiology,1 Immunology,2 Medicine, University of Washington, Seattle, Washington 981953
Received 21 December 2005/ Returned for modification 8 February 2006/ Accepted 7 March 2006
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RD1 mutant whose stage of attenuation was previously characterized in zebrafish embryos. A detailed microscopic examination of infected embryos revealed that bacteria lacking Erp were compromised very early in infection, failing to grow and/or survive upon phagocytosis by host macrophages. In contrast,
RD1 mutant bacteria grow normally in macrophages but fail to induce host macrophage aggregation and subsequent cell-to-cell spread. Consistent with these in vivo findings, erp-deficient but not RD1-deficient bacteria exhibited permeability defects in vitro, which may be responsible for their specific failure to survive in host macrophages. |
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The last decade has seen significant advancements in the genetic manipulation of mycobacteria to define and characterize mycobacterial virulence factors (13, 24, 32, 41). Mutations that reduce virulence have been identified, and the majority of these affect the structure and/or the function of the highly complex cell wall and outer lipid layer. These include mutations in genes involved in cell wall lipid synthesis, composition, or transport (8, 9, 11, 14, 19, 20, 22, 23, 28); the PGRS cell surface proteins (2, 36, 39); and the RD1 locus that encodes a putative secretion system (21, 25, 26, 31, 35, 45). However, a clear understanding of the underlying mechanisms for these virulence deficiencies has been lacking.
The Mycobacterium protein Erp, another cell surface component, was the first Mycobacterium virulence protein to be characterized by targeted deletion (4). Despite a series of genetic and biochemical characterizations (5, 16, 17, 29, 30), its role in virulence remains poorly understood. This Mycobacterium-specific secreted/cell surface protein is comprised of three domains: a conserved N-terminal domain with a canonical Sec-dependent signal sequence, a repetitive central domain, and a conserved hydrophobic C-terminal domain that appears to be involved in a loose anchoring of Erp to the cell surface (30). Virulence studies with M. tuberculosis and M. bovis erp mutants revealed that the bacteria are growth attenuated in cultured macrophages and in a mouse model of infection (4, 5).
M. marinum, a close genetic relative of M. tuberculosis (43) (http://www.sanger.ac.uk/Projects/M_marinum/), is used as a model for mycobacterial pathogenesis (3, 15, 18, 21, 22, 33, 34, 42). M. marinum is the causative agent of systemic granulomatous infections of ectotherms, such as fish and frogs (1), and peripheral chronic granulomatous disease (fish tank granulomas) in humans (44). Experimental inoculation of leopard frogs (Rana pipiens) results in a chronic subclinical infection much like latent tuberculosis in humans (37). Given that M. tuberculosis and M. marinum cause similar pathology in infected hosts, have similar endocytic trafficking pathways in cultured macrophages (3), and share virulence determinants (21, 45), it is likely that these related pathogens use similar survival strategies in vivo.
We have previously developed a zebrafish embryo model of infection to characterize the earliest events after mycobacterial infection (15). Zebrafish embryos are transparent during the first 2 weeks of life, allowing the infectious process to be visualized in real time. Studies using this model revealed that M. marinum injected into the bloodstream are rapidly taken up by host macrophages, usually within 30 min of injection. Over the next 24 h, infected macrophages exit the bloodstream, migrating into tissues. These infected macrophages next begin to aggregate and further recruit additional uninfected macrophages, some of which ultimately differentiate into the epithelioid macrophages typical of granulomas. The timing of aggregation, although dependent on both the virulence of the strain used and the number of organisms injected, usually occurs 2 to 5 days postinjection (J. M. Davis and L. Ramakrishnan, unpublished results). This system has proven valuable in clarifying the mechanism of action of Mycobacterium virulence determinants. For example, in a previous study we demonstrated that the M. marinum
RD1 mutant (45), like its M. tuberculosis counterpart, is growth attenuated when assayed by bacterial counts in bulk-cultured macrophages. However, detailed analysis using the zebrafish embryo infection model showed that RD1-deficient bacteria are capable of growth in individual macrophages in vivo but fail to induce macrophage aggregation and subsequent intercellular spread (45). This finding revealed that intracellular growth in individual macrophages is insufficient to ensure bacterial proliferation and that additional host cells must be recruited and infected.
In the present study, we characterize another M. marinum virulence determinant, the erp locus, using a combination of in vivo and in vitro assays. We found that, like the M. marinum RD1 locus, erp is required for bacterial growth in vivo. However, by using the zebrafish embryo model, we show that, in contrast to the RD1 locus, erp is required for growth and/or survival in individual macrophages. The growth attenuation of this mutant in vivo may be explained at least in part by a permeability defect.
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TABLE 1. Bacterial strains used in this study
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Macrophage infections. Growth in J774 macrophages was determined as described previously (36). Briefly, 5 x 104 J774A.1 murine macrophages in grown in Dulbecco modified Eagle medium (Gibco) supplemented with 10% fetal bovine serum were seeded into the wells of a 24-well plate and allowed to adhere overnight. The following day, the cells were infected with M. marinum for 1 h at 33°C. Infected medium was replaced with 1 ml of fresh medium containing 40 µg of streptomycin/ml. To determine the intracellular bacterial counts at various times postinfection, cells were washed three times with 1x phosphate-buffered saline, lysed with 100 µl of 1% Triton X-100, scraped with a pipette tip, and diluted 10-fold with 1x phosphate-buffered saline. Dilutions were plated onto 7H10 agar and incubated at 33°C for 7 to 14 days.
Frog infection. Wild-caught male Rana pipiens (approximately 10 to 12 cm) were obtained from J. M. Hazen (Alberg, VT). Frogs were infected by intraperitoneal injection as described previously (12). One, two, or twelve weeks later, liver and spleen tissues were harvested, and the bacterial CFU were enumerated by plating on 7H10 agar supplemented with amphotericin B and, in the case of KK33 and KK60, with kanamycin. Frogs were housed and all animal procedures were carried out in accordance with University of Washington IACUC regulations.
Zebrafish procedures. Zebrafish embryos at 32 h postfertilization were infected by microinjection at the caudal vein as previously described (12, 15). To assess virulence of various M. marinum strains, cohorts of embryos hatched at the same time were infected (45 embryos per strain) and monitored daily for mortalities. Each treatment group of 45 embryos was distributed into three tanks of fifteen and scored separately to account for the possible contribution of tank effects. Mean time to death (MTD) was scored for each tank, and no significant differences were found between tanks of fish infected with the same strain. The data for fish infected with a given strain were then pooled, and MTD values between strains were compared by using analysis of variance (ANOVA). For the visualization of bacteria in vivo, fluorescent strains were used (Table 1), and embryos were mounted for observation as described previously (12, 15, 45). When scoring the levels of infection in zebrafish embryos, the individual making this assessment was blinded to the strain used to infect each embryo so as to avoid bias.
MIC assays. The agar dilution method was used to determine the MIC for each strain (22). Individual plates of 7H10 agar (supplemented as described above) were prepared (30-ml volume), with twofold dilutions of the antibiotic being tested. Plates were spotted with 10 µl of early-log-phase cultures in triplicate, and all strains were spotted onto the same plate. Plates were incubated at 33°C and scored after 8 and 11 days.
Statistical analyses. Statistical analysis was performed by using In-Stat software (Graphpad Software, Inc.).
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The M. marinum erp mutant is growth attenuated in cultured macrophages and adult animals. The M. tuberculosis erp locus is required for growth both in cultured macrophages and in a mouse model of infection (4). We found M. marinum erp to be similarly required for growth in cultured macrophages. As shown in Fig. 1A, the erp::aph strain failed to grow in J774A.1 macrophages over an 8-day time course. This growth attenuation was indistinguishable from that observed for a M. marinum mutant that lacks the RD1 virulence locus (45). In contrast, the wild-type and complemented mutant strains grew approximately 50-fold over the 8-day monitoring period.
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FIG. 1. The M. marinum erp::aph mutant is growth attenuated in both murine macrophages and frogs. (A) J774A.1 macrophages were infected as described in Materials and Methods with strains M ( , 8.8 x 103 CFU), KK33 ( , 7.7 x 103 CFU), KK60 (x, 4.4 x 103 CFU), or RD1-6 ( , 1.6 x 104 CFU). All datum points were obtained in triplicate, and the means and standard deviations are shown. The assay was performed two additional times with similar results. (B) Leopard frogs (n = 5) were infected as described in Materials and Methods with strain M ( , 6.7 x 105 CFU), KK33 ( , 2.9 x 105 CFU), KK60 (x, 2.5 x 105 CFU), or RD1-6 ( , 2.7 x 105 CFU). Mean log CFU per liver are shown with the standard deviation, and the Students unpaired t test was used to assess significance. For the 2-week time point, P < 0.05 (KK33 versus KK60). For the 12-week time point, P < 0.05 (M versus RD1-6 and M versus KK33) and P < 0.01 (KK33 versus KK60). Similar results were obtained from the spleen (data not shown).
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RD1 mutant bacteria were similarly attenuated (P < 0.05), as shown previously (45). As was the case in cultured macrophages, complementation of the erp::aph mutation restored growth in frogs. Thus, the M. marinum and M. tuberculosis erp-deficient mutants had comparable phenotypes with respect to growth in culture, macrophage monolayers, and animals. Furthermore, the attenuation characteristics of the M. marinum erp-deficient mutant were indistinguishable from those of the M. marinum
RD1 mutant (31, 45).
The M. marinum erp::aph mutant is attenuated in the zebrafish embryo infection model.
The M. marinum erp::aph mutant was next analyzed for virulence in the zebrafish embryo infection model (15). In this model, embryos are infected by microinjection with a small number of bacteria (ranging from 10 organisms to
300) at approximately 32 h postfertilization, shortly after the beginning of circulation. Injection directly into the caudal vein results in immediate dispersal of the bacteria via the bloodstream, their subsequent uptake by circulating macrophages, and migration of infected macrophages into the tissues where they aggregate to form granulomas. To assess the virulence of the erp::aph mutant, 45 embryos were infected per strain, and survival was monitored over a 2-week time course. Embryos infected with the erp::aph and
RD1 mutants fared better than those infected with wild-type and erp::aph complemented strains (Fig. 2A). The MTD for embryos infected with the wild-type and complemented strains was significantly shorter than for those infected with the mutants (Table 2).
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FIG. 2. erp::aph and RD1 mutants exhibit reduced virulence and growth in zebrafish embryos. (A) Kaplan-Meier curves for zebrafish embryos infected with the following doses (CFU): strain M (20 CFU), KK33 (38 CFU), RD1-6 (22 CFU), and KK60 (53 CFU). The data are shown as percent surviving each day postinfection. (B) Embryos were infected with the following doses (CFU): KK11 (161 CFU), CC59 (200 CFU), and KK47 (226 CFU). Embryos were imaged at both 1 h and at 5 days postinfection by using a fluorescence microscope at x40 total magnification. Images shown are 10-s exposures of green fluorescence. Some autofluorescence is visible along the dorsal side due to the presence of melanophores.
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TABLE 2. Mean time to death for zebrafish embryos infected with M. marinuma
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RD1 bacteria. Injection with either of these strains resulted in low burden infections and a paucity of macrophage aggregates typical of the wild-type infection (Fig. 2B, arrows). We could not quantify the growth of these strains in zebrafish embryos using bacterial counts, since we were unable to recover erp::aph mutant bacteria using the lysis procedure required for this analysis (45). This failure to recover erp::aph mutant bacteria was specific as wild-type and
RD1 bacteria were readily recovered (H. Volkman, D. Beery, and L. Ramakrishnan, unpublished data). These experiments revealed that erp::aph and
RD1 bacteria were similarly growth attenuated in zebrafish embryos.
Erp-deficient bacteria fail to grow intracellularly in a zebrafish embryo model of infection.
The intracellular growth by mycobacteria has traditionally been assayed in cultured cell lines by enumerating the total growth of the bacterial population in a population of macrophages as a surrogate measure of growth in the individual cells. However, recent studies of the RD1 locus (21, 25, 45) have shown that this can be a faulty assumption. In our previous work we found that
RD1 bacteria seemingly failed to grow intracellularly (as measured in such an assay); however, closer examination using the zebrafish embryo model revealed that these bacteria are capable of intracellular growth but rather fail to spread among host cells. We concluded that in intracellular growth assays in cultured cell lines, a limited amount of growth may occur intracellularly, but unless bacteria continue to spread to new host cells, no increase in the overall population is observed. Therefore, we were similarly interested to use this infection model to pinpoint the precise nature of attenuation for the erp::aph mutant.
Prior detailed analyses in the zebrafish embryo have revealed that infection by wild-type bacteria proceeds in sequential steps (15). Upon injection of M. marinum, macrophages migrate to the site of infection and phagocytose the bacteria. Infected macrophages then migrate back into tissues and ultimately aggregate into granulomas. In initial experiments with the erp::aph strain we did not observe any obvious defects in macrophage recruitment, phagocytosis of bacteria, or migration into tissues (D. Beery and L. Ramakrishnan, unpublished observations), suggesting that, like the
RD1 mutant (45), the erp::aph mutant was competent for these very early steps. We next performed a detailed comparison of embryos infected with wild-type,
RD1, and erp::aph bacteria at 5 days postinfection by using fluorescence and differential interference contrast (DIC) microscopy at high magnification. Similar to what was observed at low magnification (Fig. 2B), abundant macrophage aggregates were found in the wild-type-infected embryos, whereas fewer were observed in embryos infected with either mutant strain (data not shown). With respect to the infection burden of individual (nonaggregated) macrophages, wild-type-infected embryos contained macrophages representing a wide spectrum of infection levels, as expected. Single macrophages contained anywhere from one to >10 bacteria (Fig. 3A). However, a striking difference was apparent between embryos infected with the two mutant strains. Macrophages of embryos infected with the
RD1 mutant typically harbored large numbers of bacteria (Fig. 3B), whereas those from embryos infected with the erp::aph mutant frequently harbored very few bacteria (Fig. 3C). Furthermore, erp::aph bacteria were often dim (Fig. 3C), suggesting that they are being killed (in contrast, all strains were similarly bright in culture). These observations suggested that erp::aph and
RD1 mutant bacteria might be attenuated for distinct reasons, despite their similarities in other assays.
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FIG. 3. erp::aph mutant bacteria fail to grow or survive in zebrafish embryo macrophages. Ten embryos were infected per strain and were examined by fluorescence and DIC microscopy at 5 days postinfection at x600 magnification. Mean infection doses (CFU) were as follows: KK11 (158 CFU), CC59 (214 CFU), and KK47 (279 CFU). Shown are representative images of infected macrophages for KK11 (A), CC59 (B), and KK47 (C). For each panel, upper images are overlays of DIC (grayscale) and bacterial fluorescence (green), while bottom images are fluorescence only. Scale bar, 25 µm. Arrows indicate heavily infected macrophages, arrowheads indicate lightly infected macrophages, and the asterisk indicates an aggregate of infected macrophages. For the bottom panels of panel C, the brightness and contrast were adjusted to allow better visualization of KK47 bacteria, which were dimmer than the other strains. (D) Schematic diagram of the zebrafish embryo. (E) Average proportion of macrophages containing <5, 5 to 10, or >10 bacteria, when embryos were infected with wild-type, RD1, or erp::aph bacteria. Significance was assessed by ANOVA, comparing the proportion in each category across the three strains. The mean number of individual infected macrophages did not differ between strains. See the text for additional details.
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RD1 bacteria than when they were infected with erp::aph bacteria (P < 0.01). The converse was also true; significantly more infected macrophages fell into the low-burden category (<5 bacteria per cell) when the embryos were infected with erp::aph bacteria than when they were infected with
RD1 bacteria (P < 0.01). No difference was observed in the proportions of moderately infected macrophages. Wild-type-infected embryos had an intermediate number of macrophages in each category. This was due to the fact that during infection by wild-type bacteria, infected macrophages are titrated out into granulomas, which were not scored in this assay. In contrast, the
RD1 and erp::aph mutant-infected macrophages were less likely to form aggregates, and the discrepancy in the number of bacteria they contained reveals that these two mutant strains are attenuated for different reasons despite their identical attenuation phenotypes in virulence assays that measure overall organism burden (Fig. 1). erp-deficient bacteria are attenuated primarily because of their lack of intracellular growth and/or survival, whereas
RD1 mutant bacteria grow successfully in macrophages but fail to induce subsequent aggregation and intercellular spread (Fig. 4) (45).
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FIG. 4. Proposed pathway for the early stages of Mycobacterium pathogenesis, highlighting the steps impacted by the Erp and RD1 virulence determinants. See the text for details.
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RD1 strain, which demonstrated normal susceptibility. These findings suggest that the M. marinum erp::aph mutant has increased permeability to a variety of hydrophobic agents, which may explain its decreased growth and/or survival in macrophages. |
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TABLE 3. erp-deficient bacteria are more susceptible to hydrophobic antibiotics
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As was the case with the RD1 locus (45), the zebrafish embryo infection model has refined our understanding of the role of the erp locus in Mycobacterium virulence. Using this model we find that Erp-deficient bacteria have an early and intrinsic defect in intracellular growth and/or survival in macrophages. This is in contrast to
RD1 bacteria, which proliferate normally in individual macrophages but have diminished and delayed formation of macrophage aggregates and are defective in intercellular spread within these aggregates (45). This difference in intracellular growth was not revealed in the standard assay designed to monitor net bacterial growth in a population of cultured macrophages (Fig. 1A) but rather was observed only when a detailed comparison of the two mutants was made during infection of zebrafish embryos (Fig. 3). The points at which these two determinants impact the infectious process are depicted in Fig. 4. Although both begin to exert their influence in the early stages of infection, it is clear that erp is required earlier than is the RD1 locus. Erp-deficient bacteria do not survive or grow within individual macrophages, so that infection is thwarted prior to macrophage aggregation into granulomas. It is noteworthy that the differences in the capacity of these two mutants for intracellular growth do not result in a differential outcome later in infection (Fig. 1B and 2A and Table 2). This observation reinforces our previous findings with the
RD1 mutant that the capacity for intracellular growth alone is not sufficient to confer full virulence and that the ability of mycobacteria to proliferate to their maximum extent also depends on the cell-to-cell spread impacted by the RD1 locus. Furthermore, it would appear that these two aspects of the infectious process (intracellular growth and intercellular spread) are important throughout infection, since both mutants are comparably attenuated in the short-term embryo infection model and in the long-term chronic frog model. That both mutants are capable of establishing infection, albeit at a lower tissue burden than for the wild type, reinforces the notion that mycobacteria use multiple redundant mechanisms to ensure their survival (9, 14, 36, 39).
The finding that the erp::aph mutant is compromised for intracellular growth, coupled with its failure to grow on Middlebrook 7H11 agar replete with antibiotics, suggested a permeability defect that might explain both phenotypes. Indeed, upon further examination we found that the loss of Erp renders bacteria more permeable to a variety of lipophilic compounds. These permeability defects may render the bacteria more susceptible to intracellular host defenses such as reactive oxygen and nitrogen intermediates, degradative enzymes, and defensins. Permeability defects have been postulated as the reason for attenuation for a variety of Mycobacterium mutants. For example, mutations in the M. marinum kasB gene involved in mycolate production rendered bacteria more permeable to deoxycholate and more sensitive to a variety of lipophilic antibiotics (22). On the other hand, mutations in the M. tuberculosis fadD26 and mmpL7 genes, which are involved in PDIM synthesis (8, 9, 14), rendered bacteria more permeable to detergent (38) and yet not more susceptible to hydrophobic antibiotics (19, 38). Clearly, the complexity of the permeability barrier conferred by the Mycobacterium cell wall and outer lipid layer are such that individual components may confer protection against different types of compounds.
That permeability defects are complex is further revealed by a comparison of the attenuation phenotypes of various permeability mutants. In M. tuberculosis, the fadD26 mutant is growth attenuated in activated, but not naive macrophages (38), whereas macrophage activation is not required to restrict growth of erp mutants (4; the present study). Indeed, some permeability mutants do not have a virulence defect, as is the case with the M. tuberculosis fbcC gene, which encodes a mycolyltransferase (27). In M. marinum, the erp and kasB mutants have similar profiles of susceptibility to lipophilic antibiotics (22; the present study) (Table 3), and yet the former is more attenuated for growth in cultured macrophages (22; C. Cosma and L. Ramakrishnan, unpublished data). In our preliminary examination of the kasB mutant in zebrafish embryos, we found that in this model too, kasB-deficient bacteria are less attenuated than erp::aph bacteria (Cosma, Kim, and Ramakrishnan, unpublished). These differences in intracellular growth could be for several reasons. First, features of the Mycobacterium permeability barrier relevant for intracellular survival may simply not be revealed by in vitro membrane permeability assays. Alternatively, the permeability defect conferred by the loss of Erp may be only partially responsible for its virulence defects and Erp may play a second role in intracellular survival, independent of its contribution to the Mycobacterium permeability barrier. Finally, the loss of KasB may have a severe enough effect on the Mycobacterium cell wall or outer lipid layer that genetic or regulatory compensations have occurred to provide better survival both in vitro and in vivo. Whatever the reason, these results underscore the importance of in vivo assays to determine the true impact on the virulence of mycobacterial permeability defects detected in vitro.
By combining a variety of infection models with in vitro assays, we have demonstrated that the Mycobacterium erp locus is required for intracellular growth and survival and that this requirement may be due in part to its role in maintaining integrity of the cell wall and outer lipid layer. The use of M. marinum as a surrogate model in the zebrafish has allowed a more precise determination of this attenuation defect than was previously apparent.
This study was supported by NIH grants RO1 AI036396 and RO1 AI54503 to L.R.
Present address: Centers for Molecular Medicine, State University of New YorkStony Brook, Stony Brook, NY 11794-5120. ![]()
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