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Infection and Immunity, August 2006, p. 4581-4589, Vol. 74, No. 8
0019-9567/06/$08.00+0 doi:10.1128/IAI.00001-06
Copyright © 2006, American Society for Microbiology. All Rights Reserved.
Department of Oral Biology, State University of New York, Buffalo, New York 14214
Received 1 January 2006/ Returned for modification 21 March 2006/ Accepted 30 May 2006
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In the unique oral environment, S. mutans exists primarily on the tooth surfaces. As a colonizer of the enamel surfaces, S. mutans, along with other dental microorganisms, forms a high-cell-density biofilm, dental plaque. The structure and composition of the plaque are strongly influenced by factors such as the source and availability of nutrients, the ability of bacteria to adapt to fluctuations in environmental conditions, and interactions with other plaque organisms (24). S. mutans mutants deficient in synthesis, catabolism, and binding of extracellular polysaccharides exhibit decreased cariogenicity and altered biofilm-forming capacities (2, 21, 46).
Production of extracellular polysaccharides from dietary carbon sources via glucosyltransferases (Gtfs) (4) and fructosyltransferase (Ftf) (1) contributes to the primary virulence of S. mutans. The adhesive glucans formed by the Gtfs, especially the water-insoluble glucans synthesized by the GtfB and -C enzymes, are significant constituents of dental plaque biofilms which facilitate adherence and accumulation of stable biofilms (13, 30, 37). Ftf synthesizes fructans from extracellular sucrose; these fructans are used primarily as a carbohydrate reservoir (5, 14), and it has been suggested that Ftf and fructans may also promote bacterial adhesion (26). GtfB and -C are encoded by the gtfB and gtfC genes, respectively; these genes are arranged in tandem within the same operon and can be transcribed from a common promoter located 5' of the gtfB gene. In addition, the gtfC gene also has its own promoter (12). The ftf gene is transcribed from its own promoter, which has two inverted repeat sequences (16, 33). The expression of these extracellular sugar metabolism enzymes is subject to change depending upon the availability of carbon sources (12, 26, 35, 45).
Bacterial communication via quorum-sensing signaling systems has been shown to be important in biofilm formation and competence development in streptococci, including S. mutans. The comC gene product, i.e., competence-signaling peptide (CSP) (17), and a two-component signal transduction system appear to play an important role in facilitating the natural transformation of S. mutans bacteria as well as in the formation of biofilms by and the aciduricity of the organisms (6). This quorum-sensing signaling system is encoded by the comCDE genes, corresponding to the CSP precursor, a histidine kinase (receptor for CSP), and a response regulator, respectively (20). Bacteria adapt to environmental changes by modulating the expression levels of the genes involved.
While initially characterizing the ftf gene, Sato and Kuramitsu discovered that there was an open reading frame (ORF3) downstream from the ftf gene with its own promoter transcribed in the opposite orientation to that of the ftf gene (29). Shibata and Kuramitsu (33) more recently reported that ORF3, named frp, encodes a putative protein homologous to DNA binding proteins and likely functions as a transcriptional regulator. By using DNA mobility shift assays, it has been shown that Frp binds to a DNA sequence in the ftf promoter region containing two inverted repeats located upstream of 10 and 35 sequences of the ftf gene (33). It was presumed that the function of Frp is to regulate the transcription of ftf, but this was not directly demonstrated. This communication, therefore, describes the function of Frp in extracellular polysaccharide metabolism, biofilm formation, and genetic competence.
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comC (made by transformation of GS5 with S. mutans NG8
comC) (17); LN62, a gtfB mutant (22); and SP2, a spontaneous gtfBC mutant (11). Escherichia coli DH5
[
80dlacZ
M15 recA1 endA1 gyrA96 thi-1 hsdR17 supE44 relA1 deoR
(lacZYA-argF)] was utilized as a general cloning host. S. mutans strains were grown in Todd-Hewitt broth (THB; Invitrogen, Carlsbad, CA) and on tryptic soy broth agar (TSA) plates (Difco, Detroit, Mich.), as well as in chemically defined medium (CDM; 0.2% L-glutamic acid, 0.02% L-cysteine, 0.09% L-leucine, 0.1% NH4Cl, 0.25% K2HPO4, 0.25% KH2PO4, 0.4% NaHCO3, 0.12% MgSO4 · 7H2O, 0.002% MnCl2 · 4H2O, 0.002% FeSO4 · 7H2O, 0.06% Na-pyruvate, 0.0001% riboflavin, 0.00005% Ca-pantothenate, 0.0001% nicotinic acid, 0.00001% p-aminobenzoic acid, 0.00005% thiamine-HCl, 0.00001% biotin, 0.0001% pyridoxal-HCl, 0.00001% folic acid) with different carbon sources. E. coli strains were cultured in L broth (Invitrogen), and transformants were selected on L agar plates supplemented with the indicated antibiotics. Plasmids used in this study were pUC119Em (unpublished data), in which an erythromycin resistance gene (34) was cloned into the BamHI site of pUC119 (39), and pRKF (unpublished data), which contains a HindIII fragment of frp and partial upstream sequences. DNA and RNA manipulations. DNA and RNA isolation, restriction endonuclease digestion, PCR, Southern blotting, ligation, transformation, and other DNA manipulations were carried out as described previously (40). Restriction endonucleases and other DNA-modifying enzymes were obtained from Invitrogen, New England Biolabs, Inc. (Beverly, MA), and Promega Corp. (Madison, WI) and used according to the specifications of the suppliers.
Construction of an S. mutans frp mutant. PvuII/NarI-digested pRKF was treated with the Klenow fragment, self-ligated, and transformed into E. coli. The resultant plasmid, pDfrp, contained a new BamHI site with the deletion of a 447-bp frp fragment 64 bp downstream from the start codon. The BamHI-digested erythromycin resistance gene from pUC119Em was introduced into the BamHI site of pDfrp, and this process yielded the recombinant plasmid pDfrpEm. The linearized pDfrpEm was transformed into S. mutans GS5 by natural transformation (40). The erythromycin-resistant transformants were selected on TSA plates with 5 µg/ml erythromycin. The frp deletion mutation was confirmed by Southern blotting and PCR (data not shown).
Reverse transcription and quantitative real-time PCR. Total RNA was treated with DNase I (Promega) at 37°C for 60 min to remove contaminant DNA from the RNA sample and then reverse transcribed with Superscript II (Invitrogen) at 37°C for 60 min using specific primers (Table 1) for each target sequence according to the supplier's instructions. Quantitative real-time PCR was performed using the iCycler iQ real-time PCR detection system (Bio-Rad, Hercules, CA). The reaction solution, 25 µl, consisted of a pair of specific primers for each target sequence (5 µM), 2.5 µl of cDNA, and 12.5 µl of iQ SYBR green Supermix (Bio-Rad). The conditions for quantitative real-time PCR were as follows: preheating at 95°C for 2 min followed by 40 amplification cycles of 95°C for 30 s, 50 to 55°C for 30 s, and 72°C for 30 s. Internal controls were used for each sample by detecting groEL mRNA, a host-keeping gene in S. mutans. Controls for each primer pair and DNase I-treated RNA sample without reverse transcription were included as negative controls. Standard curves were generated using 10-fold serial dilutions of the RNA standards. All samples were analyzed in triplicate. The mean cDNA copy numbers obtained for each gene were divided by the internal control values to standardize for the mRNAs present in each sample (8). Relative comparisons between corrected values were performed using the analysis of Student's t test.
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TABLE 1. Primers used in reverse transcription and real-time PCR
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Detection of fructosyltransferase. Ftf activity was measured as described previously with minor modifications (29). Briefly, 50 µl of protein was added to 50 µl of reaction solution (30 µl H2O, 10 µl of 1 M potassium phosphate buffer, 10 µl of 25% sucrose containing 25 mCi/ml [3H]fructose [sucrose supplied by NENTM Life Science Products, Inc., Boston, MA]) and incubated at 37°C for 1 h, and 1.0 ml of methanol was added into each reaction solution, followed by storage at 20°C for 20 min. The sample was then filtered through glass microfiber filters (Whatman GF/A). The filter membranes were washed, dried, and counted in a liquid scintillation counter (29). Ftf protein levels were detected by Western blotting using anti-Ftf antibody (47).
Detection of glucosyltransferase. Gtf activity was measured as described previously with slight modifications (31). Briefly, 50 µl of protein was added to 50 µl of reaction solution (10 µl H2O, 10 µl of 1 M Na acetate buffer, pH 6.0, 10 µl dextran T10 [1 mg/ml], 20 µl of 0.1% sucrose containing 0.02 µCi/ml [U-14C]glucose [sucrose supplied by NENTM Life Science Products, Inc., Boston, MA]) and incubated at 37°C for 1 h, and 1.0 ml of methanol was added to each reaction solution; the solutions were then placed at 20°C for 20 min. The sample was then filtered through glass microfiber filters (Whatman GF/A). The filter membrane was washed, dried, and counted. The Gtf protein levels were detected by Western blotting using anti-GtfBC antibody (47).
Biofilm formation assay. Biofilm formation was quantified as previously described (41). Flat-bottom polystyrene microtiter plates (96-well Easy Wash enzyme immunoassay-radioimmunoassay plates; Corning Inc., Corning, N.Y.) containing 100 µl of quarter-strength THB-mucin-0.5% sucrose per well were inoculated with S. mutans (1.7 x 105 CFU per well) from a 24-h growth in THB. After 24 h of incubation at 37°C, 25 µl of 1% (wt/vol) crystal violet solution was added to each well. After 15 min, the wells were rinsed three times with 200 µl of distilled water and dried in air. The crystal violet on the abiotic surfaces was solubilized in 95% ethanol, and the optical density at 600 nm was measured. Growth was determined by measuring the turbidities (optical densities at 600 nm) of parallel wells following resuspension of the sessile organisms together with the planktonic cells.
Determination of the transformation efficiency of S. mutans.
Bacteria were cultured in THB-10% horse serum overnight at 37°C and then inoculated (1/10) into fresh THB-10% horse serum. Bacteria were incubated for 2 h, and 10 µg/100 µl of chromosomal DNA from the GS5::
gtfD mutant (tetracycline resistant) (10) was added. The cells were incubated at 37°C anaerobically for 48 h. The transformation efficiency was determined as the number of transformants divided by the total cells transformed.
Complementation of the frp gene.
A 1.0-kb DNA fragment containing the frp coding sequence, as well as upstream and downstream sequences amplified by a pair of primers (frp9, 5'-CGTCTATTTAAAATAATAGGC-3'; frp10, 5'-GTTTAGATCTTTTTGTCTAAC-3'), was cloned into the PvuII site of plasmid pResEm, and the resulting plasmid was transformed into S. mutans strains GS5
frpSP and GS5, yielding frp single-crossover complemented strain Cfrp and control wild-type GS5frpEM. The correct DNA integration was confirmed by Southern blotting (data not shown). The S. mutans strains were grown in 1% glucose containing THB, and RNA was extracted and subjected to reverse transcription and quantitative real-time PCR.
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FIG. 1. Effects of frp mutation on transcription, expression, and function of the ftf gene. Bacteria were grown in CDM-1% sugar, and total RNA and protein were prepared as described in the text. White bars represent values for the wild-type GS5 strain. Black bars represent values for the frp mutant. Means from three independent experiments are shown (error bars indicate standard deviations). (A) Reverse transcription and quantitative real-time PCR were conducted as described in the text. Significant differences were detected (P < 0.05) between values for the frp mutant and those for the wild-type strain in the presence of sucrose, glucose, and fructose. (B) Fructosyltransferase activities were measured as described in the text using [3H]sucrose. Significant differences were detected (P < 0.05) between values for the frp mutant and those for the wild-type strain in the presence of glucose and fructose. (C) Western blotting was performed using anti-Ftf. wt, wild type. frp, frp mutant.
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The protein levels of Ftf were assessed by Western blotting using anti-Ftf serum (Fig. 1C). The results showed that the carbon sources had a significant influence on the expression of the ftf gene in both the wild-type GS5 strain and the frp mutant. Protein levels of Ftf were highest in glucose-containing medium, in parallel with the activity results. There was no detectable Ftf protein in supernatant fluids of cultures of either the frp mutant or the wild-type strain grown in the presence of sucrose, which reflected the low Ftf activity detected in the culture fluids. These results indicated that frp was required for optimal transcription and expression of ftf gene.
Frp positively regulates expression of glucosyltransferase B and C in the presence of glucose. Since S. mutans can utilize extracellular sucrose to produce the exopolysaccharide glucans by GtfB, -C, and -D, we examined the effects of the frp mutation on the transcription of the gtfB, -C, and -D genes by reverse transcription and quantitative real-time PCR (Fig. 2A and B). The transcriptions of both gtfB and -C were decreased in the frp mutant compared to those of the wild-type strain in the presence of glucose. However, in fructose medium, the transcriptions of gtfB and -C in the frp mutant were similar to those in the wild-type strain. Transcription of gtfB in the frp mutant was significantly decreased in the presence of sucrose compared to that in the wild-type strain. In the presence of sucrose, in contrast, the transcription of gtfC in the frp mutant was similar to that in the wild-type strain. The transcription of gtfD was not significantly altered in the frp mutant compared to that in the wild-type strain under these conditions (data not shown).
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FIG. 2. Effects of the frp mutation on transcription, expression, and function of the gtf genes. Bacteria were grown in CDM-1% sugar, and total RNA and protein were prepared as described in the text. White bars represent values for the wild-type GS5 strain. Black bars represent values for the frp mutant. Means from three independent experiments are shown (error bars indicate standard deviations). (A) Reverse transcription and quantitative real-time PCR of gtfB gene transcription were conducted as described in the text. Significant differences were detected (P < 0.05) between values for the frp mutant and those for the wild-type strain in the presence of sucrose and glucose. (B) Reverse transcription and quantitative real-time PCR of gtfC gene transcription were conducted as described in the text. Significant differences were detected (P < 0.05) between values for the frp mutant and those for the wild-type strain in the presence of glucose. (C) Total glucosyltransferase activities were measured as described in the text by use of [14C]sucrose. All values are means ± standard deviations from three identical experiments. Significant differences were detected (P < 0.05) between values for the frp mutant and those for the wild-type strain in the presence of glucose. (D) Western blotting was performed using anti-GtfBC. wt, wild type.
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The expression of the gtfB and -C genes was also examined by Western blotting using anti-GtfBC (Fig. 2D). The results consistently showed decreased protein expression of both GtfB and -C in the frp mutant compared to the wild-type strain in the presence of glucose. In contrast, only gtfB showed decreased expression in the frp mutant compared to that in the wild-type strain in the presence of 1% sucrose. There was also no difference between the frp mutant and the wild-type strain in the expression of the GtfB and -C proteins in the presence of fructose. Therefore, the frp mutation either decreased or had little effect on the expression of gtf genes, depending upon the sugar source for growth.
The frp mutation inhibits sucrose-dependent biofilm formation by S. mutans. In order to evaluate the effects of the frp mutation on biofilm formation by S. mutans, the biofilm formation assay was carried out as described earlier in the presence of different sugars (Fig. 3). The results showed that the frp mutant formed an amount of biofilm less than that formed by the wild-type strain only in the presence of sucrose (P < 0.05). The gtfB mutant, LN62, also showed attenuated biofilm formation compared to the wild-type strain (P < 0.05) as previously described (37). Levels of biofilm formation were similar for the frp mutant, the gtfB mutant, and the wild-type strain in the presence of glucose or fructose. These results indicated that the influence of Frp on sucrose-dependent biofilm formation may be due primarily to its effects on gtfB gene expression.
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FIG. 3. Modulation of sucrose-dependent biofilm formation by the frp gene. (A) Bacterial growth and biofilm formation of S. mutans wild-type GS5, the frp mutant ( frp), and the gtfB mutant (LN62) in quarter-strength THB-mucin-0.5% sucrose. Growth (white bars) and biofilm formation (black bars) were measured under anaerobic conditions. (B) Data from a similar experiment in the presence of 0.5% glucose. The means of three samples and standard errors are shown. Significant differences were detected (P < 0.05) between values for the frp mutant and those for the wild-type strain and the gtfB mutant in the presence of sucrose. OD600, optical density at 600 nm.
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FIG. 4. Reverse transcription and quantitative real-time PCR of comC mRNA in S. mutans GS5 and the frp mutant. Total RNA was isolated from cells grown anaerobically in the different media at 37°C, and the relative transcription levels were determined using reverse transcription and quantitative real-time PCR to quantify the mRNAs of the comC gene. White bars represent mRNA of comC in wild-type GS5, and black bars represent mRNA levels of comC in the frp mutant. All experiments were carried out in triplicate (error bars indicate standard deviations). Significant differences were detected (P < 0.05) between the values for the frp mutant and those for the wild-type strain when 1% sucrose-CDM, THB, and 1% sucrose-THB (THB-suc) were used.
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TABLE 2. Transformation efficiencies of S. mutans strains
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FIG. 5. Reverse transcription and quantitative real-time PCR of frp mRNA of S. mutans GS5 and the frp mutant. Total RNA was isolated from cells grown anaerobically in the different media at 37°C, and the relative transcription levels were determined using real-time PCR. White bars represent frp levels in wild-type GS5, and black bars represent frp levels in the frp mutant. The data represent the results from three independent experiments, and error bars show standard deviations. Significant differences were detected (P < 0.05) between the values for the frp mutant and those for the wild-type strain in all media tested. THB-suc, 1% sucrose-THB.
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FIG. 6. Reverse transcription and quantitative real-time PCR results for ftf (A), frp (B), gtfB (C), and gtfC (D) mRNA in the frp mutant, the complemented strain (Cfrp), and the wild-type strain. Total RNA was isolated from cells grown anaerobically in 1% glucose-THB media at 37°C, and the relative transcription levels were determined using reverse transcription and quantitative real-time PCR. Significant differences were detected (P < 0.05) between the values for the frp mutant and those for the complemented and wild-type strains. There were no significant differences (P > 0.05) between the values for the complemented strain and those for the wild-type strain. The data represent the results from three independent experiments, and error bars show standard deviations.
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Extracellular sugar metabolism has been of interest because of its association with dental caries pathogenesis as a virulence factor of S. mutans. Although ftf and gtfs have distinct genetic organizations and different promoters on the chromosome of S. mutans, they are induced by their common substrate, i.e., sucrose in the diet, and are subject to fluctuation in the presence of different sugars (12, 27, 35, 45). Our results that frp deficiency in S. mutans significantly decreases the transcription of ftf in the presence of sucrose, glucose, and fructose suggest that Frp functions as a positive transcriptional regulator of ftf expression. In addition, the apparent dramatic decrease in Ftf activity as well as in Ftf protein levels in both the wild-type strain and the frp mutant in the culture fluids in the presence of sucrose is likely influenced by the relocation of Ftf to a cell-associated form as a result of insoluble glucan synthesis (29).
It is interesting that the effects of Frp on expression of both gtfB and gtfC genes are somewhat distinct from the effect on ftf expression. In general, Frp appears to function as a positive transcriptional regulator of ftf expression as well as gtfB and gtfC expression, especially when S. mutans is grown in presence of glucose. However, in the presence of sucrose, gtfC expression is primarily Frp independent, in contrast to gtfB and ftf expression. Furthermore, fructose appears to affect ftf expression in the frp mutant much more strongly than it affects the expression of gtfB and gtfC. These results are compatible with the hypothesis that there are multiple regulatory mechanisms involved in the expression of exopolysaccharide-synthetic genes. It will be of interest to determine if the Frp regulatory system interacts with these other systems either directly or indirectly. The difference in sugar effects on gtfB, gtfC, and ftf indicates that different mechanisms may also exist in the regulation of transcription of these genes by Frp, since there is no inverted repeat in the promoter region of the gtfBC gene comparable to that in the ftf promoter region which binds Frp specifically.
Sugar metabolism pathways in S. mutans are also subject to catabolic repression when glucose is present (28, 42). The result that glucose, of all the sugars tested, causes the most significant repression in the frp mutant of the exopolysaccharide synthesis enzymes and of gtfB, gtfC, and ftf relative to the levels of these enzymes and genes found for the wild-type strain suggests that Frp may function, in part, as an antagonist of catabolic repression. The Frp defect may therefore enhance catabolic repression in the presence of glucose. Although other sugars besides glucose may produce intermediates involved in catabolite repression, the present results suggest that glucose is more efficiently metabolized to such intermediates in S. mutans. The results showing that transcription of the comC gene, which is not known to be subject to catabolic repression by glucose, are consistent with this possibility and need to be investigated in detail.
Biofilm formation by S. mutans has been shown to be dependent upon several factors interacting with the oral environment. The expression levels of the ftf, gtfB, and gtfC genes have been shown to increase in biofilm cells (16, 19). Among the different sugars, fructose and glucose have ftf expression effects that are enhanced compared to that of sucrose (26), while both gtfB and gtfC are associated with biofilm formation in the presence of sucrose (38). Fructans produced by Ftf contribute to the virulence of the biofilm by acting as potential binding sites for S. mutans adhesion and also as an extracellular nutrient reservoir for plaque bacteria. In contrast, glucans produced by GtfB and GtfC play major roles in sucrose-dependent biofilm formation by S. mutans (36, 38). GtfC in particular plays a crucial role in sucrose-dependent adhesion and is essential for biofilm formation on smooth surfaces. Thus, the defect in biofilm formation displayed by the frp mutant in the presence of sucrose appears to be primarily due to reduction in GtfB production plus a ftf deficiency in this strain (23). Since Ftf activity is decreased in the frp mutant, the decrease in GtfB activity may result from interference with the normal regulatory effects of Ftf on gtfB expression. Interestingly, the frp mutant is not repressed in comC expression in nonsucrose media and therefore is not defective in sucrose-independent biofilm formation. A recent study indicated that a comC mutant of S. mutans GS5 was defective in this property (50).
Competence development in S. mutans is associated with the quorum-sensing signaling system of this organism (7, 17, 18, 23). The frp mutant was shown to display decreased transcription of the comC gene compared to the wild-type strain in the presence of sucrose. Accordingly, the transformation efficiency of the frp mutant is significantly reduced compared to that of the wild-type strain. Furthermore, the addition of CSP to the cells partially restored transformation efficiency in both the frp mutant and the comC mutant; this suggests a role for Frp in competence development and transformation efficiency. It is not clear why the addition of exogenous CSP to the comC mutant did not allow for full complementation of transformation to the wild-type levels. Such incomplete complementation was also observed for other phenotypic traits of the mutant following exposure to synthetic CSP (data not shown). Other virulence factors regulated by competence (48) may also be attenuated in the frp mutant, and this will be examined in future experiments.
Overall, our results with the frp mutant indicate that Frp has pleiotropic effects on virulence-related cellular functions. Frp appears to be an important regulator of exopolysaccharide synthesis, sucrose-dependent biofilm formation, and competence development. Further investigation of how Frp affects all of these activities at the molecular level will be necessary to evaluate the direct role of Frp in the coordination of these physiological functions. In addition, it will be of interest to determine which environmental cues are used by Frp to control these interactions.
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