Previous Article | Next Article ![]()
Infection and Immunity, September 2006, p. 4990-5002, Vol. 74, No. 9
0019-9567/06/$08.00+0 doi:10.1128/IAI.00697-06
Copyright © 2006, American Society for Microbiology. All Rights Reserved.
Departments of Microbiology,1 Periodontics, School of Dental Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104-60302
Received 1 May 2006/ Accepted 18 June 2006
|
|
|---|
|
|
|---|
The Cdt of A. actinomycetemcomitans, like all members of this cytotoxin family, is an atypical A-B-type toxin consisting of a heterotrimer composed of 18- to 25-kDa (CdtA), 31-kDa (CdtB), and 21-kDa (CdtC) gene products (34, 48, 50). The deduced amino acid sequences of the A. actinomycetemcomitans CdtA, CdtB, and CdtC protein subunits are greater than 90% identical to those of the H. ducreyi Cdt (7, 34, 50). The CdtB subunit is most closely related to neutral nucleases of the type I DNase family (3, 10, 14, 16, 28, 29). In the crystal structures of the H. ducreyi and A. actinomycetemcomitans holotoxins, the CdtA and CdtC subunits form two heterogeneous ricin-like lectin domains that comprise a putative receptor-anchoring groove (20, 38, 39, 51). Purified recombinant CdtA and CdtC bind to cells in culture (2, 25, 30, 33, 35) and in an enzyme-linked immunosorbent assay of cells (CELISA) (5, 30). The cell surface receptor for the Cdt has not yet been identified. However, there is evidence that both CdtA and CdtC may be carbohydrate-binding proteins that recognize N-linked fucose moieties on the surfaces of HeLa cells (35). Other studies implicate gangliosides, such as GM1 and GM3, in toxin-cell recognition (36). In addition to being presumed to have a cell-binding function, CdtC may facilitate the transport of CdtB into the cell by an endosome-mediated process (1, 8, 17).
Examination of the crystal structure of the Cdt indicates that each of the CdtA and CdtC subunits contains two predicted intrachain disulfides (38, 51). The cysteines that comprise the disulfides are highly conserved in the CdtA and CdtC protein families (20). Intrachain disulfides are important for the proper folding and, in some instances, secretion of proteins. Ricin contains an interchain disulfide between the A and B chains that is essential for activity (4). However, the B chain also contains predicted intrachain disulfides suggested to be important for the protein to fold properly to maintain galactose (receptor)-binding activity (32).
Our recent studies have been focused on using mutagenic approaches to obtain more-detailed information about CdtA and CdtC structures and functions. In an earlier study, we constructed a library of proteins with randomly generated point mutations in cdtA (5). It was found that single conserved amino acid substitutions residing outside of predicted binding domains (aromatic-patch region) can significantly reduce the binding and biological activity of the holotoxin without necessarily affecting holotoxin assembly. In the present study, we used both random and targeted mutagenesis strategies to further dissect the molecular interactions of CdtC and CdtA. In the targeted strategy, we mutated each of the cysteine residues in both of these subunit proteins to evaluate the contributions of structurally predicted intrachain disulfides to subunit binding, Cdt assembly, and cytotoxicity.
|
|
|---|
[supE44
lacU169 (
80lacZ
M15) hsdR17 recA1 endA1 gyrA96 thi-1 relA1] (Invitrogen, Carlsbad, CA). Potential mutants were screened, identified, and characterized as described previously (5). Briefly, the transformants were pooled, and the plasmid DNA was extracted and used to transform E. coli BL21(DE3) [F ompT hsdSB (rB mB) gal dcm (DE3)] competent cells (Novagen, Madison, WI). Individual transformants were grown in LB broth medium containing 75 µg/ml of ampicillin. Isopropyl-ß-D-thiogalactopyranoside (IPTG) (Sigma Chemicals, St. Louis, MO) was added to a final concentration of 1 mM when the cultures reached late logarithmic phase (optical density at 600 nm of 0.8 to 1.0) to induce gene expression. Bacteria were collected from the induced cultures, washed, and lysed at 4°C by sonication (three bursts of 1-min duration each at the low power setting; Braun-Sonic 2000, B. Braun Biotech, Inc., Allentown, PA). Inclusion bodies were collected by centrifugation and were dissolved and stored in 200 µl of a 6 M urea-phosphate-buffered saline buffer. These samples were used only for the initial screening of the transformants in the CELISA. |
View this table: [in a new window] |
TABLE 1. Oligonucleotide primers used for random and site-directed mutagenesis
|
Site-directed mutagenesis of cdtC and cdtA.
The cysteine residues C96, C107, C135, and C149 in CdtC and C136, C149, and C178 in CdtA were replaced using site-directed mutagenesis. Synthetic oligonucleotide primer pairs (Table 1) were used to change each cysteine residue to alanine. Mutant DNA strands were made using PfuUltra DNA polymerase in PCR (Stratagene, La Jolla, CA). Plasmid DNA preparations from pJDC2 and pJDA9 (5) were used as PCR templates for CdtC and CdtA cysteine mutagenesis, respectively. Methylated parental DNA strands were digested with DpnI (New England Biolabs, Beverly, MA) and transformed into E. coli TOP10 [F mcrA
(mrr-hsdRMS-mcrBC)
80lacZ
M15
lacX74 recA1 araD139
(ara-leu)7697 galU galK rpsL(Strr) endA1 nupG] chemically competent cells (Invitrogen). The mutations were confirmed by sequencing of the plasmid insert DNA. Plasmid DNA having the confirmed sequence was isolated and transformed into E. coli BL21(DE3) to express the mutant gene and to isolate the gene product.
Isolation of recombinant wild-type and mutant subunit proteins and reconstitution of holotoxin. Recombinant clones E. coli BL21(DE3)(pJDA9), E. coli BL21(DE3)(pJDB7), and E. coli BL21(DE3)(pJDC2) were used to prepare the three wild-type CdtA-His6, CdtB-His6, and CdtC-His6 proteins, respectively, by affinity chromatography as described previously (5). All three proteins have His6 tags at their carboxy-terminal ends. The same method was used to obtain the mutated CdtC-His6 and CdtA-His6 gene products from the cdtC random-mutagenesis library and cysteine mutants, respectively. Yields were approximately 5 mg of protein/100 ml of culture. The final protein preparations were dialyzed to remove urea, passed through 45-µm filters, and quantified with a Micro BCA protein assay kit (Pierce, Rockville, IL) as described previously (5). Purity was assessed by analysis using 10 to 20% polyacrylamide gels. Aliquots of the quantified protein samples were stored at 70°C in a buffer containing 10 mM Tris-HCl (pH 7), 100 mM NaCl, 5 mM MgCl2, and 5 mM imidazole for use in the binding and activity assays.
Wild-type holotoxin and holotoxin containing mutant CdtC-His6 or CdtA-His6 proteins were reconstituted as described previously (5, 33). The affinity-purified recombinant His6-tagged proteins were mixed in equivalent proportions, by mass, and incubated for 1 h at 4°C in a reconstitution buffer containing 10 mM Tris-HCl (pH 7), 100 mM NaCl, and 5 mM MgCl2. In some experiments, 10 mM dithiothreitol (DTT; Sigma Chemicals) was added to the reconstitution buffer to reduce the holotoxin.
Cytotoxicity assays. Cell cycle arrest was determined by flow cytometry as described previously (25). Chinese hamster ovary K1 (CHO-K1) cells were grown in Ham's F-12 medium containing 5% fetal calf serum overnight at 37°C (34). Cultures were then treated with 10 µg (total protein) of reconstituted holotoxin/ml of culture medium. Reconstituted holotoxins contained either a CdtC-His6 or a CdtA-His6 mutant protein and the remaining two wild-type subunits. Cells were exposed to the holotoxin preparations in culture for 36 h. Propidium iodide-stained nuclei were prepared from 1 x 106 cells and were analyzed on a FACSCalibur flow cytometer at the University of Pennsylvania Cancer Center Flow Cytometry and Cell Sorting Shared Resource facility. The data from 30,000 events were analyzed with ModFit 3.0 (Verity Software House, NH). Fluorescence-activated cell sorter analyses were repeated three times using three independent holotoxin-treated cultures.
To quantify the effects of the reconstituted mutant holotoxins on cell proliferation, CHO cells were grown and exposed to toxin as described previously (5, 33). Mutant holotoxin preparations were reconstituted without urea and typically contained 5 µg of total reconstituted protein/ml of culture medium. After 6 days of growth, colonies were fixed, stained, and counted as described previously (5, 33). The data were expressed as numbers of CFU. In those experiments that examined the effect of the reducing agent on Cdt activity, 10 mM DTT was added to both the refolding buffer and the cell culture medium. The DTT did not affect the growth of CHO cells. Proliferation assays were run a minimum of three times using independently grown cultures and various batches of reconstituted holotoxin.
Pulsed-field gel electrophoresis (PFGE) was performed as described previously (25). HeLa cell cultures (5 x 106 cells) were exposed to 10 µg/ml of reconstituted holotoxin prepared with wild-type CdtA-His6 and CdtB-His6 and either a wild-type or a mutant CdtC-His6 protein for 48 h. The treated cells were lysed, in situ, in agarose plugs. Electrophoresis was performed for 40 h at 4°C. The ratio of DNA in the well to that in the gel was estimated from digitized images of ethidium bromide-stained gels using the software program ImageJ version 1.34 (http://rsbweb.nih.gov/nih-image/index.html). The PFGE experiments were repeated twice.
Holotoxin complex formation in solution was determined by differential dialysis (5). Briefly, a dialysis membrane with a molecular mass exclusion limit of 100 kDa (Spectrum Laboratories Inc., Rancho Dominguez, CA) was soaked and rinsed in distilled water. Combinations of purified wild-type and mutant subunit proteins (100 µg of each protein or mutant protein) were suspended in a total volume of 1 ml of refolding buffer containing 0.3 M urea. Each sample was dialyzed against 800 ml of the same buffer for 48 h at 4°C with two buffer changes. An aliquot (35 µl) of each reconstituted protein sample was then examined before and/or after dialysis on Western blots as described previously (5). The amount of protein in each immunopositive band was quantified by analyzing digitized images with ImageJ. In those experiments that examined the effect of the reducing agent on complex formation, 10 mM DTT was added to the refolding and dialysis buffers. These experiments were performed two to three times on separate batches of purified recombinant proteins.
Binding assays. A CELISA (5) was used to initially measure the binding activity in the crude inclusion body fractions from the CdtC-His6 random-mutagenesis transformants. The CELISA was repeated with affinity-purified gene products expressed from the small number of CdtC-His6 transformants that had confirmed point mutations. Purified wild-type CdtC-His6 and mutant CdtC-His6 mutant proteins were added to triplicate wells in 96-well plates (10 µg/well) containing attached CHO cells (1.5 x 104 cells/well). Bound protein was detected with anti-His · Tag monoclonal antibody (1:3,000 dilution; Novagen) and antimouse immunoglobulin G horseradish peroxidase conjugate (1:3,000 dilution; Amersham Biosciences, Piscataway, NJ) as described previously (5). These experiments were run a minimum of three times.
To assess ligand and subunit binding activities of the CdtA-His6 and CdtC-His6 mutant proteins, a thyroglobulin ELISA (5) based on the immobilized glycoprotein binding experiments of McSweeney and Dreyfus (35) was used. In all experiments, microtiter plates (96 wells) were coated with 75 µg/well of thyroglobulin (Sigma Chemicals) overnight. To determine the subunit binding activity of CdtC-His6 wild-type or mutant proteins, the thyroglobulin plates were first treated with wild-type CdtA-His6 (4 µg/well). Saturation kinetics were determined for the binding of wild-type CdtC-His6 to wild-type CdtA-His6 by adding 0 to 16 µg/well of wild-type CdtC-His6 to triplicate wells. Plates were washed, treated with anti-His · Tag monoclonal antibody and horseradish peroxidase conjugate, and processed as described above for the CELISA. In other experiments, each random CdtC-His6 amino acid substitution or cysteine replacement mutant (3.5 µg/well) was added to triplicate wells, and the plates were processed as described above. In all CdtC-His6 subunit binding experiments, an absorbance ratio was calculated by dividing the average absorbance value (of triplicate wells) of the CdtC-His6 wild-type- or mutant-protein-containing well by the average absorbance value of wells containing only bound wild-type CdtA-His6. To assess binding of the CdtA-His6 cysteine replacement mutants to ligand, 10 µg of each mutant protein/well was added to the thyroglobulin-coated wells. The plates were incubated and processed as described above.
The thyroglobulin ELISA was also used to determine the effect of the reducing agent on wild-type CdtA-His6 binding to ligand. The thyroglobulin and/or the wild-type CdtA-His6 subunit protein was treated with a reducing buffer containing 10 mM DTT, 4 M guanidine-HCl, and 10 mM Tris-HCl (pH 8.5) for 10 min at room temperature (15). Separate ELISA plates were first coated with reduced and unreduced thyroglobulin. Reduced and unreduced wild-type CdtA-His6 (0 to 16 µg/well) was then added to triplicate wells in both the reduced and unreduced thyroglobulin-coated plates. Reduced wild-type CdtA-His6 was added in the presence of binding buffer containing 10 mM DTT. Plates were developed as described above. All experiments were repeated three times with different batches of purified recombinant proteins.
Computer analysis.
The European Molecular Biology Open Software Suite (EMBOSS, release 3.0; http://emboss.sourceforge.net) (46) was used to obtain amino acid sequence alignments and to calculate isoelectric points (pI). Deduced amino acid sequences of wild-type and mutant A. actinomycetemcomitans recombinant CdtA-His6 and CdtC-His6 were from nucleic acid sequences obtained during this study. The H. ducreyi CdtA and CdtC sequences were from GenBank (accession number U53215). The crystal structure of the A. actinomycetemcomitans Cdt (51) was modeled with the UCSF Chimera 1.2197 software program (http://www.cgl.ucsf.edu/chimera/) (44). Coordinates were obtained from the Protein Data Bank (accession number 2F2F). Bond distances in angstroms and surface-exposed residues were also determined with this program. Disulfide bonds were also predicted using the genomic disulfide analysis program (GDAP) (http://www.doe-mbi.ucla.edu/
boconnor/GDAP/) (40).
|
|
|---|
|
View this table: [in a new window] |
TABLE 2. Summary of cdtC and cdtA mutations
|
![]() View larger version (40K): [in a new window] |
FIG. 1. Effect of point mutations in CdtC on the cytotoxic activities of reconstituted heterotoxin. (A) Effects on CHO cell proliferation. Affinity-purified recombinant wild-type CdtA-His6, CdtB-His6, and CdtC-His6 or mutant CdtC-His6 proteins were preincubated in folding buffer, and the mixture (5 µg/ml of culture medium) was added to CHO cell cultures. Cell colonies were stained and counted after 6 days of culturing, and the data are expressed as numbers of CFU. Amino acid substitutions are shown for each mutant. CdtC designates holotoxin reconstituted with wild-type CdtC-His6. All samples were run in triplicate. Statistically significant differences between the numbers of CFU of untreated CHO cell cultures and of those treated with wild-type or mutant heterotoxins are marked with an asterisk (P < 0.000005). (B) Assessment of DNA damage by PFGE. Reconstituted wild-type or mutant heterotrimers (10 µg of total protein/ml) were added to HeLa cells, and the cultures were incubated for 36 h. The cells were then prepared for PFGE as described in Materials and Methods. The numbers represent the relative percentages of DNA retained in the well versus that in the gel. (C) Assessment of heterotoxin assembly by differential dialysis. Heterotrimers composed of preincubated mixtures of either wild-type or mutant CdtC-His6 proteins were dialyzed for 48 h. The protein composition of the material remaining after dialysis was examined by Western blotting as described in Materials and Methods. CdtA' represents the truncated form (17 to 18 kDa) of CdtA-His6. Results of all experiments were typical of a minimum of three trials.
|
![]() View larger version (24K): [in a new window] |
FIG. 2. Effect of point mutations on the binding activities of CdtC. (A) Saturation curve of the binding of wild-type recombinant CdtC-His6 to CdtA-His6 on thyroglobulin-coated wells from an ELISA. Bound Cdt protein was detected with anti-His · Tag monoclonal antibody (1:3,000 dilution) and antimouse immunoglobulin G horseradish peroxidase conjugate (1:3,000 dilution) as described in Materials and Methods. The dashed line marks the absorbance value of bound CdtA-His6 at an input concentration of 4 µg/well. All CdtC-His6 concentrations were run in triplicate. (B) Affinity-purified recombinant CdtC-His6 and the mutant proteins (10 µg/well) were added to ELISA plate wells coated with thyroglobulin (white bars) or thyroglobulin and 4 µg/well CdtA-His6 (black bars). mutC162 has a single nucleotide change (T46C) but no corresponding amino acid change. Bound protein was detected as in the experiment whose results are shown in panel A, and absorbance values were compared to those of wells containing only 4 µg/well CdtA-His6 (middle dotted line). All samples were run in triplicate. Statistically significant differences between the absorbance values for the mutant and wild-type CdtC-His6 proteins bound to wild-type CdtA-His6-coated thyroglobulin are marked with an asterisk (P < 0.005). Results of all experiments were typical of three trials.
|
![]() View larger version (52K): [in a new window] |
FIG. 3. Positions of the amino acid substitutions in CdtC and CdtA. (A) Alignment of the deduced amino acid sequences of A. actinomycetemcomitans recombinant CdtC-His6 (5) and H. ducreyi CdtC (GenBank accession number U53215). Unique amino acid substitutions identified in the random-mutagenesis library and from the targeted cysteine mutagenesis are shown. Nonidentical residues are marked by shaded boxes. (B) Alignment of the deduced amino acid sequences of A. actinomycetemcomitans recombinant CdtA-His6 (5) and H. ducreyi CdtA (GenBank accession number U53215). Amino acid substitutions for the four cysteine residues are shown. Nonidentical residues are marked by shaded boxes. The substitution C197S is in mutA65 from Cao et al. (5). (C) Alignment of the deduced amino acid sequences of A. actinomycetemcomitans recombinant CdtA-His6 and CdtC-His6, comparing the relative locations of the substituted cysteine residues. Identical amino acids are marked by shaded boxes. Cysteine residues in CdtA-His6 and CdtC-His6 not predicted to form disulfides are marked with an asterisk.
|
![]() View larger version (73K): [in a new window] |
FIG. 4. Locations of the amino acid substitutions in CdtC-His6 and CdtA-His6 in the crystal structure of the A. actinomycetemcomitans Cdt. The coordinates (Protein Data Bank accession number 2F2F) for the crystal structure were computer modeled. (A) The eight unique amino acid substitutions in the A. actinomycetemcomitans recombinant CdtC-His6 mutants having a binding-deficient phenotype are shown at their corresponding positions in the A. actinomycetemcomitans crystal structure. Positions of the mutated residues within the structure are in orange. The position of the one substitution (F97C) that resulted in a noncytotoxic phenotype is underlined. The amino [N(E21)]- and carboxy [C(S186)]-terminal residues in CdtC are labeled. Only the backbone structure is shown. (B) Locations of predicted disulfide-forming cysteine residues in CdtC and CdtA in the A. actinomycetemcomitans crystal structure. There is one amino acid difference between the CdtA-His6 shown in Fig. 3 (5) and that used to form the Cdt crystal structure (Protein Data Bank accession number 2F2F). Calculated distances between paired cysteines predicted to form disulfide bonds are shown in angstroms. Only the backbone structure is shown. Note that the structure in panel B is rotated for clarity relative to that in panel A. (C) Crystal structure of the A. actinomycetemcomitans Cdt showing the surface exposed residues in CdtC (blue) and CdtA (green). Exposed cysteines are yellow and are labeled. (D) Same structural model as that shown in panel C but rotated to show the exposed cysteines in CdtA.
|
The A. actinomycetemcomitans CdtA also has four cysteine residues that are predicted, using the GDAP algorithm, to form two intrachain disulfides corresponding to residues C137/C150 (distance, 5.068 Å) and C179/C198 (distance, 5.07 Å). These predicted distances are in reasonable agreement with distance measurements taken from the A. actinomycetemcomitans Cdt structure (Fig. 4B). Therefore, we also replaced three of the four cysteines (C136, C149, and C178) in CdtA-His6 with alanine. The fourth cysteine (C197) had been changed to serine in a mutant (mutA65) recovered from the CdtA-His6 random-mutagenesis library published earlier (5). A fifth cysteine, at position 16 in the CdtA-His6-deduced amino acid sequence (Fig. 3B), was not replaced because it would be eliminated when the protein was posttranslationally modified by the bacterium to remove the signal sequence. The mutants containing cysteine substitutions in CdtC-His6 and CdtA-His6 are described in Table 2.
Holotoxin reconstituted with two of the CdtC-His6 cysteine mutants (mutCc96 and mutCc149) lost the ability to inhibit the proliferation of CHO cells (Fig. 5A). The other two mutant proteins from mutCc107 and mutCc135 formed active holotoxins that exhibited a partial reduction, 28 and 23%, respectively, in the number of CFU relative to that of the untreated culture (P < 0.005 and P < 0.05, respectively). However, it was observed that the CHO cell colonies that formed following exposure to the mutant holotoxins made with protein from mutCc107 and mutCc135 were small in size relative to colonies in untreated cultures (Fig. 5A, inset). The noticeably smaller colony size was undoubtedly a consequence of an altered effect of the mutant holotoxin on cell growth, which led to a slower but inevitable progression to cell death. Therefore, replacement of either C107 or C135 with alanine still resulted in a CdtC-His6 protein that formed a biologically active, but altered, holotoxin.
![]() View larger version (22K): [in a new window] |
FIG. 5. Effect of cysteine mutant holotoxins on the proliferation of CHO cells. (A) Holotoxin was reconstituted with either wild-type CdtC-His6 or CdtC-His6 cysteine mutant proteins and added to CHO cell cultures as described in the legend to Fig. 1. Cell colonies were stained and counted after 6 days of growth, and the data were expressed as numbers of CFU. All samples were run in triplicate. Statistically significant differences between the numbers of CFU in untreated CHO cell cultures and in those treated with wild-type or mutant heterotoxin are marked with asterisks (*, P < 0.005; **, P < 0.05). Images of stained colonies from the untreated and mutCc107 holotoxin-treated cultures are shown in the inset. nc, normal colonies; sc, small colonies. (B) Same experiment as that shown in panel A except that holotoxins were reconstituted with the wild-type and cysteine mutant CdtA-His6 proteins.
|
Therefore, two of the CdtC-His6 cysteine mutants and all four of the CdtA-His6 cysteine mutant proteins formed holotoxins that exhibited partial to full cytotoxicity in the cell proliferation inhibition assay. The same mutant phenotypes were observed by flow cytometry (Table 3). An average of 96% of the CHO cells in cultures treated with wild-type recombinant toxin had a significant 4N DNA content after 36 h of exposure. The high percentage of cells having a 4N DNA content was indicative of cell cycle arrest at the G2/M transition (5). Only 9 and 7% of the CHO cells in cultures exposed to holotoxin reconstituted with CdtC-His6 from mutCc96 and mutCc149, respectively, had a 4N DNA content increase. In contrast, 81 and 38% of cells incubated with holotoxin reconstituted with CdtC-His6 from mutCc107 and mutCc135, respectively, had a 4N DNA content. Holotoxin made with each of the CdtA-His6 cysteine mutants arrested cells at the G2/M transition (Table 3 in the present study and mutA65 in Table 4 of Cao et al. [5]).
|
View this table: [in a new window] |
TABLE 3. Cell cycle analysis of CHO cells treated with reconstituted mutant holotoxin
|
![]() View larger version (19K): [in a new window] |
FIG. 6. Effect of cysteine replacement on the ligand and subunit binding activities of CdtC-His6 and CdtA-His6 proteins. ELISA plates were coated with thyroglobulin. Wild-type CdtA-His6 (4 µg/well) and wild-type CdtC-His6 (3.5 µg/well) were added individually to the thyroglobulin-coated wells (white bars). Other wells received 4 µg/well of wild-type CdtA-His6 followed by 3.5 µg/well of the individual wild-type and cysteine mutant CdtC-His6 proteins (gray bars). Other thyroglobulin-coated wells received 10 µg/well of wild-type or cysteine mutant CdtA-His6 proteins (black bars). The plates were developed, and the absorbance was determined as described in the legend to Fig. 2. All samples were run in triplicate. Statistically significant changes in the binding of the CdtC-His6 and CdtA-His6 cysteine mutant proteins from that of the corresponding wild-type proteins are marked by asterisks (*, P < 0.0001; **, P < 0.005). Absorbance ratios based on the binding of wild-type CdtA-His6 to thyroglobulin were calculated as described in Materials and Methods. Dotted lines mark the absorbance values of wild-type CdtA-His6 (4 and 10 µg/well) plus CdtC-His6 (3.5 µg/well) bound to thyroglobulin. Results are representative of three experiments.
|
All four of the CdtC-His6 and CdtA-His6 cysteine mutants formed nondialyzable heterotrimer complexes with the corresponding wild-type subunit proteins in the differential dialysis assay (data not shown). The amount of each subunit protein remaining in each of the mutant-containing samples was quantitatively the same, after dialysis, as that in the sample containing all three wild-type proteins. These results clearly indicated that, although binding of individual subunits may be reduced by the replacement of individual cysteines in both CdtA-His6 and CdtC-His6, the effects are not great enough to destabilize the subunit proteins to the extent that heterotrimer complex formation is prevented. The fact that heterotrimers are formed supports the data showing that replacing at least one cysteine in each disulfide-forming pair in both CdtA and CdtC results in a partially to fully active holotoxin.
Effect of reducing agent on holotoxin and subunit binding. To further examine the functional significance of the predicted disulfides in CdtA and CdtC, we examined the ability of the wild-type subunit proteins to form a biologically active holotoxin complex under reducing and nonreducing conditions. CHO cells were grown under continuously reduced conditions by supplementing the culture medium with DTT. The reducing agent had no effect on the growth of the CHO cells (Fig. 7A). Holotoxin composed of wild-type subunits was reconstituted in refolding buffers with and without the reducing agent and was then added to the corresponding cell cultures growing under reducing and nonreducing conditions. There was a minimal, statistically significant difference (P = 0.02) between the number of CFU in CHO cell cultures treated with reduced reconstituted holotoxin and that of unreduced reconstituted holotoxin (Fig. 7A). Formation of a heterotrimer complex made with wild-type subunit proteins was also not affected by the reducing agent, when examined by a differential dialysis assay (data not shown).
![]() View larger version (18K): [in a new window] |
FIG. 7. Effects of a reducing agent on wild-type holotoxin and CdtA-His6 activities. (A) Purified recombinant wild-type CdtA-His6, CdtB-His6, and CdtC-His6 were reconstituted in refolding buffer under reducing and nonreducing conditions as described in Materials and Methods. These preparations were then added to CHO cell cultures growing in medium with and without 10 mM DTT. Colonies were stained and counted after 6 days of growth and were expressed as numbers of CFU. Black bars, unreduced culture and unreduced heterotoxin; white bars, reduced culture and reduced heterotoxin. Statistical differences between the effects of the unreduced and reduced samples are shown as P values. red, reduced. (B) ELISA plates were coated with either reduced or nonreduced thyroglobulin (thyroglobulin). Reduced or unreduced wild-type CdtA-His6 was then added to the wells in increasing concentrations. Bound CdtA-His6 was detected as described in the legend to Fig. 2. Unfilled squares, thyroglobulin and reduced CdtA-His6; filled squares, reduced thyroglobulin and reduced CdtA-His6; open circles, thyroglobulin and CdtA-His6; solid circles, reduced thyroglobulin and CdtA-His6. All samples were run in triplicate a minimum of three times.
|
|
|
|---|
et al. (38) showed that a large deletion of the amino-terminal region of CdtC (residues 21 to 39) destabilized the holotoxin complex and reduced but did not abolish cytotoxicity. Similar effects were obtained with a relatively large deletion (residues 179 to 186) at the carboxy-terminal end of the protein. A larger deletion (residues 169 to 178) apparently had a much greater destabilizing effect on holotoxin formation. That same group also tested the activity of a reconstituted holotoxin containing targeted mutations in CdtC (R34K and Q49A) and CdtA (P103A and Y106A). These mutated residues reside along the putative binding groove formed between the CdtA and CdtC subunits. The mutations did not appear to significantly affect holotoxin assembly but did drastically reduce cytotoxicity. Using a random-mutagenesis approach, we obtained eight CdtC mutants with unique point mutations that produced subunit proteins which exhibited a statistically significant reduction in binding to CHO cells. Two of these mutations resided in the amino-terminal region of the protein, while the other six mutations were distributed over the middle portion of the sequence. However, consistent with the findings of Lee et al. (30), no mutations leading to a binding-deficient phenotype were obtained within the 21-amino-acid conserved region in CdtA/CdtC. In addition, we did not find amino acid substitutions in the carboxy-terminal end of the protein that exhibited a loss or reduction in binding. In an earlier study, we observed that the insertion of a kanamycin resistance cassette in the 3' end of the cdtC gene did not alter the cytotoxic activity of holotoxin made with the truncated gene product (34). Only one of eight cell binding-deficient mutants (mutC216F97C) lost the ability to bind to CdtA in the thyroglobulin ELISA. In contrast to McSweeney and Dreyfus (35), we found that CdtC-His6 by itself binds very poorly to fucose-containing glycoproteins (Fig. 1C) (5). However, a CdtC-His6/CdtA-His6 complex binds specifically and stoichiometrically to thyroglobulin in an in vitro ELISA assay (Fig. 1B) (5). These data are similar to those of Deng and Hansen (11), who found that detectable levels of CdtC attached to HeLa cells in culture only when added as a complex with CdtA. Holotoxin made with CdtC-His6 from mutC216 also failed to inhibit the proliferation of CHO cells and induce DNA damage in HeLa cells. The loss of these typical Cdt activities appeared to be due to the inability of this mutant protein to form a holotoxin complex with wild-type CdtA and CdtB.
Computer models of the crystal structure of Cdt (38, 51) and the application of the GDAP algorithm (this study) predict the presence of two intrachain disulfides in CdtC. These disulfides reside between the cysteine pairs C96/C107 and C135/C149 in the deduced amino acid sequence of A. actinomycetemcomitans CdtC. The location of the predicted disulfides led to the hypothesis that the replacement of phenylalanine with cysteine at position 97 in mutC216 may interfere with the formation of the disulfide that may be formed by residues C96 and C107. To assess the potential contribution of the predicted disulfides to CdtC activity, we replaced each of the four cysteines with alanine. All four cysteines are highly conserved in CdtC (20), and it is generally accepted that intrachain disulfides are important stabilizing features of other carbohydrate-binding lectins such as the B chain of ricin (32). Therefore, we expected that independently replacing either cysteine in a potential disulfide-forming pair would extensively destabilize the CdtC protein, thus significantly altering binding properties and the formation of a biologically active heterotrimer complex. We employed primarily a genetic approach to examine the importance of disulfides for CdtC activities because of the inherent difficulties in biochemically establishing the presence of intrachain disulfides. There are no empirical data to date to establish that CdtC intrachain disulfides are formed in the heterotoxin. Yamada et al. (51) erroneously reported that Saiki et al. (47) used nonreducing sodium dodecyl sulfate-polyacrylamide gel electrophoresis to show that CdtC and CdtA contain intrachain disulfides. Only interchain disulfides can be detected by the mobility shift of a protein in reducing and nonreducing gels. Our data clearly showed that if C96 or C149 was replaced, then the mutated cdtC gene product formed biologically inactive toxin. However, replacing either C107 or C135 resulted in proteins that formed active holotoxins. Even though there was no question that the predicted disulfides were eliminated due to genetic replacement of a half cysteine, the mutant holotoxins were still cytotoxic as shown by flow cytometry and inhibition of cell proliferation. The fact that the specific activities of the mutant holotoxins made with CdtC-His6 from mutCc107 and mutCc135 were lower than those of the wild-type heterotrimer indicates that the stability of the protein is affected to some degree by either the loss of the particular cysteine or the loss of the disulfide. The presence of relatively small, slow-growing colonies in cell cultures treated with heterotoxins containing protein from mutCc107 and mutCc135 supports the conclusion that these mutated proteins are only partially destabilized. The finding that the cysteine replacement mutations had a range of effects on subunit binding and formation of active holotoxin complexes is not surprising since similar results were obtained with CdtC deletion mutants in other studies (39).
The lectin or receptor-binding component of the B chain of ricin is composed of homogeneous subunits due to dimerization of the heterodimer (32). In contrast, the cell-binding component of the Cdt is composed of heterogeneous subunits (CdtA and CdtC). It is interesting that one of the similarities between CdtA and CdtC is the structural arrangement of the cysteine pairs and, as a consequence, putative disulfides. Like CdtC, there are four highly conserved cysteines in CdtA (20) which are predicted to form two intrachain disulfides (Fig. 3C and 4B). Because of these structural similarities, we also mutated three (C136, C149, and C178) of the four potential disulfide-forming cysteines in CdtA. A CdtA mutant in which the fourth cysteine (C197) had been replaced with serine was obtained in an earlier study (mutA65 in Cao et al. [5]). Characterization of the CdtA cysteine replacements revealed mutant phenotypes very similar to those observed with the CdtC cysteine replacements.
Thus, our genetic data indicated that putative intrachain disulfides may help stabilize both the CdtC and CdtA subunits but are not essential for the formation of an active heterotoxin, albeit with reduced specific activity. Specific individual cysteine residues may be required for proper folding of the CdtC and CdtA proteins in lieu of the formation of disulfide bonds. This could explain our finding that the activities of the proteins were not totally destroyed when both of the half cysteines in a disulfide-forming pair were separately eliminated. At least in the case of ricin, one of the most well-studied A-B toxins, disulfides appear to have a more active role in maintaining a cytotoxic complex. The strongest evidence is for an interchain disulfide that links the A and B chains (32). It has been suggested that four intrachain disulfides are required for the galactose-binding activity of the B chain. However, the experimental data to support this conclusion do not appear to be as strong as those for the interchain disulfide. Since there are no cysteines in the A. actinomycetemcomitans CdtB, there are no interchain disulfides between CdtB and either of the other two subunit proteins. In addition, the cysteines in CdtC are not close enough to those in CdtA to form interchain disulfides between these two subunit proteins (Fig. 4B). We also examined the effects of reducing agents on the ability of the wild-type subunit proteins to form a biologically active heterotrimer and on the ability of wild-type CdtA to bind to thyroglobulin (experimental fucose-containing glycoprotein-like receptor) in an attempt to support the genetic data. We expected that the disulfides would be disrupted by maintaining the heterotrimer or specific subunit under reducing conditions, since at least one of each cysteine in both disulfide pairs in both CdtC and CdtA are exposed on the toxin surface (Fig. 4C and D). In support of the genetic data, wild-type Cdt subunits formed a biologically active heterotrimer complex under both reducing and nonreducing conditions. Curiously, there was a statistically significant increase in the binding kinetics of wild-type CdtA-His6 to thyroglobulin when the subunit protein was in the reduced state. These results are opposite to those that would be expected if disulfides were required to stabilize the protein for holotoxin assembly and binding to receptor. The most likely explanation for these results is that the formation of disulfides makes only a moderate contribution to the stability of CdtA and CdtC. This may make sense at least for the A. actinomycetemcomitans Cdt. This periodontal pathogen colonizes and presumably secretes the cdt gene products in periodontal pockets. Gingival sulci in healthy subjects and healthy sites in diseased subjects have reported mean oxidation-reduction (Eh) potentials of +74 ± 7 and +73 ± 12 mV, respectively (26). The mean reported Eh in periodontal pockets is 48 ± 16 mV (P < 0.001). Assembly and target cell binding of the A. actinomycetemcomitans Cdt would have to take place in this reducing environment.
This work was supported by USPHS grant DE12593 from the National Institute of Dental and Craniofacial Research.
|
|
|---|
, Y. Hsu, and C. E. Stebbins. 2006. Comparative structure-function analysis of cytolethal distending toxins. Proteins Struct. Funct. Bioinformat. 62:421-434.[CrossRef]
, D., Y. Hsu, and C. E. Stebbins. 2004. Assembly and function of a bacterial genotoxin. Nature 429:429-433.[CrossRef][Medline]
, D., and C. E. Stebbins. 2005. Mechanisms of assembly and cellular interactions for the bacterial genotoxin CDT. PLoS Pathogens 1:214-224.This article has been cited by other articles:
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Copyright © 2009 by the American Society for Microbiology. For an alternate route to Journals.ASM.org, visit: http://intl-journals.asm.org | More Info»