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Infection and Immunity, June 2008, p. 2296-2303, Vol. 76, No. 6
0019-9567/08/$08.00+0 doi:10.1128/IAI.01573-07
Copyright © 2008, American Society for Microbiology. All Rights Reserved.

Departments of Gastroenterology,1 Endocrinology and Nephrology, Graduate School of Medicine, University of Tokyo, Tokyo 113-8655, Japan,5 Department of Bacteriology, Institute of Tropical Medicine, Nagasaki University, Nagasaki 852-8523, Japan,2 Division of Gastroenterology and Neurology, Akita University School of Medicine, Akita 010-8543, Japan,3 Division of Gastroenterology, Showa University Fujigaoka Hospital, Kanagawa 227-8501, Japan4
Received 29 November 2007/ Returned for modification 11 January 2008/ Accepted 12 March 2008
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The SNARE (soluble N-ethylmaleimide-sensitive factor attachment protein receptor) hypothesis has provided a model for the fusion events of intracellular trafficking (28). SNARE proteins are small proteins (18 to 42 kDa) containing cytoplasmic coiled-coil domains, referred to as SNARE motifs, which interact with other SNAREs and are present on cellular membranous organelles including transport vesicles (11). SNARE proteins are classified as either Q- or R-SNARE according to whether they contain a glutamate or an arginine in the central region of their helical bundles, respectively (11). Alternatively, they are known as t- or v-SNARE, depending on their localization on either the target (t) or vesicle (v) membrane, respectively (27). SNARE-mediated fusion typically results from the formation of a complex consisting of one R-SNARE and three Q-SNARE motifs (25). Q-SNAREs can be subdivided into Qa-SNAREs (syntaxins), Qb-SNAREs (25-kDa synaptosome-associated protein [SNAP-25] N-terminal SNARE motif), or Qc-SNAREs (SNAP-25 C-terminal SNARE motif). R-SNAREs can be also subdivided into short vesicle-associated membrane proteins (VAMPs) and long VAMPs (25).
A number of VAMPs (classified as v-SNAREs) with their specific localizations and functions have been identified. VAMP1 and VAMP2 (also called synaptobrevins 1 and 2, respectively) are expressed in neurons and endocrine cells; are localized to synaptic vesicles, secretory granules, and recycling endosomes; and play their roles in regulated exocytosis (12). VAMP3, also called cellubrevin, is a ubiquitously expressed VAMP isoform that may confer both regulated and constitutive exocytosis (12). VAMP4, which is present on the trans-Golgi network (TGN) and in immature secretory granules, binds with syntaxin 6, thus suggesting that it may play a role in TGN-to-endosome transport (29). VAMP5, also called myobrevin, is preferentially expressed in the skeletal muscle and heart. VAMP5, which is present in the plasma membrane and perinuclear and peripheral vesicular structures of myotubes, may be involved in myotube formation during myogenesis (38). VAMP7, also called tetanus-insensitive VAMP (TiVAMP), is ubiquitously expressed and is localized to the late endosome, the lysosome, and the TGN (11). VAMP7 is involved in heterotypic endosome-lysosome and homotypic lysosome fusion, neurite extension, and apical exocytosis in polarized epithelial cells (1, 5, 14, 25, 36). Another ubiquitously expressed VAMP homolog, known as endobrevin (VAMP8), is present in early endosomes, late endosomes, and recycling endosomes in polarized epithelia. VAMP8 has been shown to be involved in homotypic early endosome and late endosome fusion (3, 4, 20, 25, 30).
Syntaxin 7 is an integral membrane protein in both late endosomes and lysosomes, and it is required for both homotypic late endosome fusion (3) and heterotypic fusion with lysosomes (19, 36). In the former case, the other required SNAREs have been identified as being Vti1b, syntaxin 8, and VAMP8 (2). In the latter case, immunoprecipitated syntaxin 7 complexes have been found to contain a number of different SNAREs: Vti1b, syntaxin 6, VAMP7, and VAMP8 (35). Among them, VAMP7 has been reported to be a key player in the heterotypic fusion events involving lysosomes (25). We recently reported that syntaxin 7 is involved in the intracellular vacuolation induced by VacA and that the VacA cytopathic effect on intoxicated cells was attenuated by inhibiting syntaxin 7 function (31).
To elucidate the molecular mechanism of the final step of VacA-induced vacuolation, which is a hybrid of the late endosome and lysosome, we examined whether VAMP7 is involved in its vacuolation as a partner of Qa-SNARE syntaxin 7. We herein demonstrated that endogenous VAMP7 was localized to the VacA-induced vacuoles and that the expression level of VAMP7 was enhanced in VacA-intoxicated cells. We also showed that the down-regulation of VAMP7 resulted in the inhibition of VacA-induced vacuolation. We therefore concluded that VAMP7 plays an important role in VacA-induced vacuolation.
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Plasmid and siRNA. The NH2-terminal green fluorescent protein (GFP)-tagged full-length VAMP7 expression vector (GFP-TiVAMP/VAMP7, from M1 to K220) and the NH2-terminal GFP-tagged NH2-terminal domain of the VAMP7 expression vector (GFP-Nter-TiVAMP/VAMP7, from M1 to N120) were kindly provided by Thierry Galli. The NH2-terminal GFP-tagged syntaxin 7 expression vector was constructed as described in a previous study (14). The pcDNA3.1/NT-GFP vector (Invitrogen) was used as a GFP control plasmid. The small interfering RNA (siRNA) duplexes for VAMP7 (SYBL1-HSS110395 to SYBL1-HSS110397) and the Stealth RNA interference (RNAi) negative control duplexes were purchased from Invitrogen (Carlsbad, CA). siRNA1 (SYBL1-HSS110395) corresponded to nucleotides 240 to 264 of human vamp7 (GenBank accession no. NM_005638), and it was located at the NH2-terminal domain. siRNA2 and siRNA3 corresponded to nucleotides 517 to 541 and 556 to 581, respectively, and they were located in the coiled-coil domain (R-SNARE motif).
Transfection. The transfection procedures were performed using Lipofectamine 2000 (Invitrogen) according to the manufacturer's instruction. AGS cells were seeded at a density of 1 x 105 cells/cm2 and transfected with constructed plasmids or siRNA duplexes.
Antibodies. Anti-VAMP7 mouse monoclonal antibody was a generous gift from Thierry Galli. Anti-VAMP8 rabbit polyclonal antibody was purchased from Abcam (Cambridge, United Kingdom) and Covalab (Villeurbanne, France). Anti-VAMP2 rabbit polyclonal antibody was obtained from Chemicon International (Temecula, CA). Anti-syntaxin 7 rabbit polyclonal antibody was kindly provided by Masamitsu Futai (Osaka University, Japan). Anti-syntaxin 4 and anti-syntaxin 6 mouse monoclonal antibodies were purchased from BD Biosciences (San Jose, CA). Anti-GFP rabbit polyclonal antibody and mouse monoclonal antibody were purchased from Clontech (Mountain View, CA) and Medical Biological Laboratories (Nagoya, Japan), respectively. Anti-actin goat polyclonal antibody was obtained from Santa Cruz Biotechnology (Santa Cruz, CA). The secondary antibodies (Cy3-conjugated donkey anti-mouse and anti-rabbit immunoglobulin G [IgG], horseradish peroxidase-conjugated donkey anti-mouse and anti-rabbit IgG, and horseradish peroxidase-conjugated donkey anti-goat IgG) were purchased from Jackson ImmunoResearch Laboratories, Inc. (West Grove, PA), and Alexa 488-conjugated anti-mouse IgG was obtained from Invitrogen.
Immunofluorescence microscopy. The cells were fixed with 2% formaldehyde in phosphate-buffered saline, treated with Triton X-100 in phosphate-buffered saline for 5 min, and incubated sequentially with Blocking Ace (Snow Brand Milk Products, Sapporo, Japan), first antibodies, and second antibodies. Samples were examined under a Nikon (Tokyo, Japan) E-600 fluorescence microscope. Images were captured and digitized using a Spot charged-coupled-device camera (Diagnostic Instruments, Sterling Heights, MI) and then edited using the Adobe Photoshop CS software program (Adobe Systems Inc., Mountain View, CA).
Northern blotting. Northern blotting was performed as described previously (17). Briefly, 20 µg of total RNA extracted from AGS cells was denatured and blotted onto a Hybond N+ nylon membrane (Amersham, Arlington, IL). The blots were hybridized with a 32P-labeled cDNA probe and washed for 30 min under high-stringency conditions (0.1x standard saline citrate, 0.1% sodium dodecyl sulfate [SDS]) at 65°C before exposure to X-ray film. To remove the probe, the membrane was incubated with hybridization buffer for 30 min at 60°C. Band intensity was measured using the ImageJ software program.
Western blotting. The protein extracts from AGS cells were prepared for immunoblotting as described previously (13). For electrophoresis, 20 µg of protein from each sample per lane was loaded onto SDS-polyacrylamide gels and run at 200 V. The proteins were then transferred onto the nitrocellulose membranes at 50 V for 3 h. For Western blotting, the membranes were incubated sequentially with Blocking Ace (Snow Brand Milk Products, Sapporo, Japan), first antibodies, and second antibodies using an enhanced chemiluminescence Western blotting detection reagent (Amersham Biosciences, Piscataway, NJ) to visualize the secondary antibody. To remove the probe, the membranes were incubated with stripping buffer containing 62.5 mM Tris-HCl (pH 6.7), 2% SDS, and 0.1 M 2-mercaptoethanol for 30 min at 50°C.
Immunoprecipitation. Affinity matrices were prepared using anti-GFP polyclonal antibody to protein A-Sepharose beads (Pierce). The Triton X-100-soluble membrane extracts prepared from the AGS cells were incubated with antibody-coated beads for 4 h at 4°C in the presence of 100 mM NaCl and 20 mM Tris-HCl (pH 7.5). The beads were washed several times in the same buffer, and the elution of bound proteins was achieved by boiling for 10 min in Laemmli sample buffer.
Analysis of mRNA by RT-PCR. For semiquantitative reverse transcription (RT)-PCR, first-stranded cDNA was synthesized by using the Superscript first-stranded synthesis system for RT-PCR (Invitrogen, Carlsbad, CA) according to the manufacturer's instructions. The oligonucleotide primers used were 5'-TCAAGAGCACAGACAGCACTTCC-3' (nucleotides 388 to 410) and 5'-GCCATGTAAATCCACCACAGAGAG-3' (nucleotides 757 to 734) for human vamp7 (370-bp PCR product) (GenBank accession no. NM_005638), 5'-GAAAGCCAAACTCAACCTCAAGTG-3' (nucleotides 515 to 538) and 5'-ATGATGCACAGGGTTTTTCTGG-3' (nucleotides 801 to 780) for human syntaxin 7 (287-bp PCR product) (GenBank accession no. NM_003569), 5'-ATCGTGTGCGGAACCTGCAAAG-3' (nucleotides 85 to 106) and 5'-ACAGGAAAGGAGACCCTCTTGG-3' (nucleotides 438 to 417) for human vamp8 (354-bp PCR product) (GenBank accession no. NM_003761), and 5'-CATTAAGGAGAAGCTGTGCTACGTC-3' (nucleotides 706 to 730) and 5'-GCTGATCCACATCTGCTGGAAG-3' (nucleotides 1147 to 1126) for human β-actin (442-bp PCR product) (GenBank accession no. NM_001101). Twenty-five PCR cycles were used.
Assay of vacuolating activity. AGS cells were seeded into 24-well plates and cultured for 18 h. The cells were then transfected with siRNA or control RNAi duplexes. After 8 h of transfection, the cells were treated with VacA and incubated for a further 24 h. To quantify the vacuolating activity, the uptake of neutral red dye into the vacuoles in VacA-treated cells was determined by measuring the absorbance at 540 nm (A540) (37). The vacuolating activity was determined by subtracting the mean A540 of the cells incubated without VacA from the A540 of VacA-treated cells and was shown as a percentage of neutral red accumulation to the mock-transfected cells.
Statistical analysis. Statistical analysis was performed using analysis of variance. A P value of <0.05 was considered to indicate a significant difference.
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FIG. 1. Immunocytochemical localization of VAMP7 to VacA-induced vacuoles in AGS cells and colocalization with syntaxin 7. (A to D) Naïve AGS cells (A) and VacA-treated AGS cells (24 h) (B to D) were fixed, stained with anti-VAMP7 antibody, and visualized with Cy3-conjugated anti-mouse IgG (A to C) or Alexa 488-conjugated anti-mouse IgG antibody (D). (A) Perinuclear distribution of endogenous VAMP7 in naïve AGS cells. (B to D) Localization of endogenous VAMP7 on VacA-induced vacuoles in intoxicated AGS cells (arrowheads). There were also some vacuoles to which VAMP7 did not localize (arrows). AGS cells were transfected with the GFP- TiVAMP/VAMP7 expression vector, cultured for 24 h with (F) or without (E) VacA, and evaluated for the colocalization of GFP and endogenous syntaxin 7. The expressions of VAMP7 and syntaxin 7 almost entirely overlapped, especially in intoxicated cells (F). Bars, 25 µm.
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FIG. 2. Effect of VacA on the expression of VAMP7 mRNA in AGS cells. (Top) The total RNA (20 µg) that was isolated from AGS cells exposed to VacA for the specified times was blotted onto a nylon membrane and probed with 32P-labeled VAMP7 cDNA. (Middle) The blot was reprobed with 32P-labeled β-actin cDNA. (Bottom) Relative intensity of VAMP7 over β-actin. The experiment was repeated three times with similar results, and one representative figure is shown. When VacA was heat inactivated (95°C for 10 min), the expression of VAMP7 did not change (data not shown).
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FIG. 3. Immunoprecipitation of endogenous syntaxin 7 and VAMP7 from VacA-treated or nontreated AGS cells followed by immunoblotting. (A) AGS cells were transfected with the GFP-tagged syntaxin 7 vector and incubated for 24 h with or without VacA. The cellular extracts were immunoprecipitated using an anti-GFP polyclonal antibody, and immunoblotting was performed using an anti-GFP monoclonal antibody and anti-VAMP7 antibody. Since SNARE proteins can be sticky, the membranes were also immunoblotted for syntaxin 4, syntaxin 6, VAMP2, and VAMP8 to prove that the interaction between VAMP7 and syntaxin 7 was not nonspecific. (B) AGS cells were transfected with the GFP-TiVAMP/VAMP7 vector and incubated for 24 h with or without VacA. The cellular extracts were immunoprecipitated using an anti-GFP polyclonal antibody, and immunoblotting was performed. The total cell lysate (TCL) of AGS cells was used as a control for the bands. When the samples of immunoprecipitation from cells not expressing GFP were immunoblotted for VAMP7 and syntaxin 7, we could not detect the specific bands (data not shown). The experiments were repeated three times independently, and representative figures are shown.
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FIG. 5. Inhibition of VacA-induced vacuolation in AGS cells by transient transfection of Nter-TiVAMP/VAMP7. (A to D) Images of fluorescence microscopy of transiently transfected GFP-tagged wild-type TiVAMP/VAMP7 (A and B) and GFP-tagged Nter-TiVAMP/VAMP7 (C and D) in the AGS cells treated (B and D) or not treated (A and C) with VacA for 24 h. (E to H) Phase-contrast images of the same fields above (A to D, respectively). VacA failed to induce cytoplasmic vacuolation in AGS cells transfected with Nter-TiVAMP/VAMP7 (D and H, arrowheads). In contrast, VacA induced multiple cytoplasmic vacuoles in AGS cells transfected with GFP-tagged wild-type TiVAMP/VAMP7 (B and F). Bars, 25 µm. (I) Numbers of vacuolated cells in AGS cells transiently transfected with GFP-tagged control, wild-type, and dominant-negative VAMP7 and cultured for 24 h with VacA. The results are expressed as percentages of vacuolated cells. Values are the means ± standard errors (n = 5) for three independent experiments in which more than 100 cells were counted. The number of VacA-induced vacuolated cells in dominant-negative VAMP7-transfected AGS cells was significantly lower than that in the cells transfected with control and wild-type VAMP7 plasmids. *, P < 0.01.
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FIG. 4. Effect of the down-regulation of VAMP7 on neutral red dye uptake into VacA-treated AGS cells. AGS cells were transfected with siRNA1 to siRNA3 or control RNAi duplexes 1 and 2, and the down-regulation of VAMP7 was confirmed by RT-PCR (A) and Western blotting (B). (A) The effect on the expression of syntaxin 7 and VAMP8 was also studied by RT-PCR. (B) AGS cells were transfected with the GFP-TiVAMP/VAMP7 vector 18 h before the transfection of siRNA or control RNAi duplexes, and Western blotting was performed using an anti-GFP monoclonal antibody. (C) For the assay of vacuolating activity, the cells were seeded into a 24-well plate and cultured for 18 h. The cells were then transfected with siRNA or control RNAi duplexes. After 8 h, the cells were treated with VacA and incubated for an additional 24 h. The vacuolating activity was determined as a percentage of neutral red dye uptake into the VacA-treated cells with respect to mock-transfected cells. Values are the means ± standard errors (n = 4) for three independent experiments. The down-regulation of VAMP7 significantly inhibited neutral red dye uptake in comparison to the control. *, P < 0.05.
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The VacA-induced vacuole has been assumed to be a hybrid of the late endosome and the lysosome (18, 22). We have reported that syntaxin 7 was directly involved in intracellular vacuolation induced by VacA (31). We then examined the involvement of VAMP7 in VacA-induced vacuolation and the interaction with syntaxin 7. VAMP8 has been shown to be involved in homotypic early endosome and late endosome fusion (3, 4, 20, 25, 30). Pryor et al. previously reported that VAMP8 and syntaxin 7 were coimmunoprecipitated using detergent-solubilized rat liver membrane fractions (25). We could not exclude the possibility that the cytopathic effect of VacA might alter the function of VAMP8 to cause a heterotypic fusion of the late endosome and lysosome. However, as depicted in Fig. 3, immunoprecipitation studies showed that VAMP7, but not VAMP8, demonstrated specific binding to syntaxin 7 specifically. Moreover, the amounts of endogenous VAMP7 and syntaxin 7 bound to GFP-tagged syntaxin 7 and VAMP7, respectively, were increased in response to VacA intoxication. Since SNARE proteins can be sticky, we also examined whether other SNARE proteins had a tendency to bind to syntaxin 7 and/or VAMP7. Syntaxin 4 and VAMP2 play a role in regulated exocytosis. Syntaxin 6 functions in vesicular transport between the TGN and the endosome. We could not detect any interaction of these proteins with either VAMP7 or syntaxin 7.
We previously reported that dominant-negative mutant syntaxin 7, which lacks a carboxyl-terminal transmembrane domain, inhibits VacA-induced vacuolation. VAMP7 is composed of three domains: an N-terminal domain, the coiled-coil domain (R-SNARE motif), and one comprising the transmembrane domain and a short luminal domain. The N-terminal domain was shown to inhibit the capacity of the R-SNARE motif to form SNARE complexes. Therefore, the N-terminal domain of VAMP7 acts as a dominant-negative form of VAMP7, and conversely,
Nter-TiVAMP/VAMP7 acts as a constitutively active form as reported previously (16, 25). In AGS cells transiently transfected with the N-terminal domain of VAMP7, VacA-induced vacuolation was considerably inhibited (Fig. 5). When we decreased the expression of VAMP7 using siRNA, vacuolation was also inhibited (Fig. 4). Although the precise mechanism by which VacA affects VAMP7 and syntaxin 7 is still obscure, VacA may interact directly or indirectly with VAMP7 and/or syntaxin 7 on the endosomal membranes.
There have also been several articles reporting that VacA-induced vacuolation can occur without any requirement for SNARE proteins (7, 10). VacA is considered to form anion-selective membrane channels in the membranes of the endocytic compartments after internalization (6, 8), although the mechanisms by which VacA undergoes sorting and trafficking to intracellular sites are poorly understood. The transmembrane VacA channel mediates an influx of anions into endosomes. To compensate for the increased anion concentration, the activity of the vacuolar ATPase proton pump on endosomes increases, thus resulting in their osmotic swelling and transformation into vacuoles (6, 10). In fact, we could see some vacuoles to which VAMP7 had not localized in VacA-treated AGS cells in addition to the vacuoles with the expression of VAMP7 (Fig. 1D, arrows). There may be several processes for VacA-induced vacuole formation. Further precise observations of VAMP7, syntaxin 7, VacA, and the vacuolar ATPase proton pump in living cells may therefore help us to obtain a better understanding of these models.
VacA was also known to affect several cellular signal transduction pathways. When VacA was added to a human adenocarcinoma cell line (AZ-521), two classes of mitogen-activated protein kinases (p38 and extracellular signal-regulated kinase 1/2) and the activating transcription factor 2 (ATF2) signaling pathway were activated (21). In BHK-21 cells expressing receptor tyrosine phosphatase β, tyrosine phosphorylation of G-protein-coupled receptor kinase interactor (Git1) can be detected (9). Therefore, VacA may alter some cellular signal transduction pathway in order to cause vacuolation, although the inhibitor of p38 kinase activity (SB203580) does not block VacA-induced vacuolation (21).
The vacuolated cells exclude trypan blue, which indicates that VacA-induced cell vacuolation is not a cytolethal phenomenon (15). Recently, VacA has been reported to promote the intracellular survival of H. pylori through the retention of Rab7 in the interference with the full maturation of vacuoles (34). In order to examine the effect of VAMP7 on VacA-induced vacuolation, we tried to generate an AGS cell line stably transfected with either GFP-TiVAMP/VAMP7 or GFP-Nter-TiVAMP/VAMP7, but the transfected cells died within a few weeks. This suggests that the appropriate expression of VAMP7 is indispensable for AGS cells to survive.
In conclusion, we have herein shown that VAMP7 is involved in the molecular mechanism of VacA-induced vacuolation. These observations are therefore considered to provide new insights into the molecular pathogenesis of gastroduodenal disease induced by H. pylori.
Published ahead of print on 24 March 2008. ![]()
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