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Infection and Immunity, May 2009, p. 1936-1944, Vol. 77, No. 5
0019-9567/09/$08.00+0 doi:10.1128/IAI.01246-08
Copyright © 2009, American Society for Microbiology. All Rights Reserved.

Kristy I. Azzopardi,
Vicki Bennett-Wood,
Elizabeth L. Hartland,
Roy M. Robins-Browne,*
and
Marija Tauschek
Department of Microbiology and Immunology, The University of Melbourne, Victoria 3010, and Murdoch Children's Research Institute, Royal Children's Hospital, Parkville, Victoria 3052, Australia
Received 13 October 2008/ Returned for modification 15 November 2008/ Accepted 22 February 2009
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Carriage of the bfpA gene, which encodes the major structural pilin subunit, is used to classify EPEC into two major subgroups, known as typical (Bfp positive) and atypical (Bfp negative) EPEC (19, 41). Typical EPEC bacteria adhere to HEp-2 cells in a localized pattern, whereas atypical EPEC, if they adhere to HEp-2 cells at all, do so in a variety of patterns, termed localized-like adherence, diffuse adherence, and aggregative adherence (33, 41). Despite their lack of Bfp, the results of epidemiological, clinical, and volunteer studies indicate that atypical EPEC are able to cause diarrhea (25, 33, 41).
Given that, as a group, atypical EPEC lack Bfp and display variable patterns of adherence to HEp-2 cells, we hypothesized that atypical EPEC strains carry novel adhesin(s) responsible for these phenotypes. Other than intimin, however, only one adhesin has so far been described in an atypical EPEC strain. This is a novel afimbrial adhesin called the locus for diffuse adherence (LDA), which was present in an atypical EPEC strain (O26:H11) isolated from an infant with diarrhea (36). However, the prevalence of LDA in other atypical EPEC strains is low (36). The aim of this study was to identify the determinants of atypical EPEC strain E128012 (O114:H2) which allow this strain to adhere to HEp-2 cells. Originally isolated from an infant with sporadic diarrhea in Bangladesh, E128012 shows localized-like adherence to HEp-2 cells and, when fed to volunteers, caused diarrhea of severity similar to that caused by a typical EPEC strain, E2348/69 (25). Our results indicated that atypical EPEC strain E128012 requires an intact pst-phoU operon to adhere to HEp-2 cells and, moreover, that Citrobacter rodentium strain ICC169, an A/E pathogen of mice that is used as a model of infections with A/E strains of E. coli, requires the same operon for virulence.
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TABLE 1. Bacterial strains and plasmids used in this study
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Recombinant DNA techniques. Routine DNA manipulations were performed by using standard techniques (1, 35), with the buffers and instructions supplied by the manufacturers of the kits and reagents used. Genomic and plasmid DNA were isolated by using the cetyltrimethylammonium bromide method (1) and a Wizard plus SV DNA purification system (Promega, Madison, WI), respectively. PCR amplifications were performed using Vent proofreading DNA polymerase (New England Biolabs, Ipswich, MA) or high-fidelity Platinum Taq DNA polymerase (Invitrogen, Carlsbad, CA). Synthetic oligonucleotides for PCR and sequencing (Table 2) were obtained from GeneWorks Pty., Ltd. (Hindmarsh, South Australia, Australia).
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TABLE 2. Oligonucleotide primers used in this study
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Construction of nonpolar pstCA and phoB mutants.
Knockout mutations were constructed in E. coli E128012 and C. rodentium by using overlapping extension PCR (9) and the "gene gorging" technique described by Herring et al. (18). First,
0.6 kb of DNA flanking the target genes was amplified by using primer pairs pstCAF/pstCAKanR and pstCAKanF/pstCAR for pstCA and phoBF/phoBKanR and phoBKanF/phoBR for phoB. The fragment length polymorphism (FLP) recombinase target (FRT)-flanked Kan resistance (Kanr) gene from pKD4 (12) was amplified by using primers pKD4F and pKD4R. This product, together with each pair of amplified flanking regions, was used as the template in a PCR using primer pairs pstCAISceIF/pstCAISceIR (pstCA) and phoBISceIF/phoBISceIR (phoB) (Table 2). The I-SceI-flanked PCR products were cloned into pGEM-T Easy to yield the donor plasmids required for gene gorging. These plasmids and pACBSR, which carries the
Red recombinase genes and the gene for I-SceI under an arabinose-inducible promoter, were cointroduced into electrocompetent E. coli E128012 or C. rodentium cells. Mutants were selected on LB plates supplemented with Kan. All mutations were confirmed by PCR using primers flanking the targeted region and primers within the Kanr gene. When required, the Kanr gene was excised by using the FRT sites that flank the Kanr gene and FLP helper plasmid pCP20 (10). E128012 and ICC169 pstCA phoB::kan double mutants were achieved by the introduction of
phoB::kan by allelic exchange in the pstCA mutant strains. The Kanr gene was excised accordingly.
Construction of trans-complementing plasmids. Wild-type pstCA was amplified from E128012 genomic DNA by using primers pstCAcF and pst4'. The resultant 1.8-kb, gel-purified, blunt-end PCR product was ligated with SmaI-linearized pBSII. This plasmid, designated pAC1, was digested with BamHI and EcoRV to release the insert, which was then ligated to BamHI- and EcoRV-digested pACYC184 to give pAC2, which carried pstCA behind the Tetr promoter of pACYC184.
The wild-type pstCA gene was amplified from C. rodentium genomic DNA (pstCACR) using primers CrpstCAcF and CrpstCAcR. The resultant purified 1.9-kb PCR product was ligated with pGEM-T Easy vector and then linearized by digestion with NcoI, and the 5' overhangs were filled in as described above. The resultant fragment was then digested with SalI, gel purified, and cloned into EcoRV- and SalI-digested pACYC184 to yield pAC4, which possessed wild-type pstCACR behind the Tetr promoter of pACYC184.
Quantitative real-time RT-PCR. Overnight cultures of E. coli and C. rodentium strains were inoculated 1:50 in LB and grown to an optical density at 600 nm of 0.6. Ten milliliters of culture was incubated with 20 ml of RNAprotect solution (Qiagen, Valencia, CA) at room temperature for 10 min, after which cells were pelleted and RNA was purified by using a FastRNA pro blue kit (Qbiogene, Inc., Carlsbad, CA). The samples were treated with DNase I before further purification using an RNeasy MinElute kit (Qiagen). Real-time PCR was performed with an MxPro-Mx3005P multiplex quantitative PCR system (Agilent Technologies, Santa Clara, CA). First-strand cDNA synthesis was performed with 5 µg of total RNA, SuperScript II reverse transcriptase (Invitrogen), and random primers (Invitrogen) according to the manufacturer's recommendations. Each 25-µl reaction mixture contained 10 ng cDNA, 300 nM of each specific primer (Table 2), and 12.5 µl 2x SYBR green master mix (Applied Biosystems, Foster City, CA). All reverse transcription-PCR (RT-PCR) data were normalized with the results for the housekeeping gene rpoD, and the relative expression ratio of the target gene was calculated as described by Pfaffl (30).
Adherence of bacteria to cultured epithelial cells. HEp-2 cell adherence assays were performed as previously described (33). Cells were examined by using bright-field microscopy for characteristic patterns of adherence and photographed with a Leica DC2000 digital camera (Leica Microsystems AG, Wetzlar, Germany). Quantitative bacterial adherence to HEp-2 cells was expressed as the number of cells with five or more attached bacteria as a percentage of the total number of cells counted. Each assay was performed in triplicate, with at least 100 cells counted for each bacterial strain.
To determine the ability of atypical EPEC strain E128012 and its derivatives to adhere to polarized cells, T84 cells of human intestinal origin were grown in a 1:1 mixture of Dulbecco's modified Eagle's medium and Ham's F-12 medium containing 5% fetal calf serum in 5% CO2 at 37°C. For cell adherence assays, T84 cells were seeded in 24-well plates at a density of 7.5 x 104 cells per well and were used when just confluent (7 to 10 days). Before infection with E. coli, the growth medium was replaced with medium containing 0.5% fetal calf serum and 0.5% D-mannose. Overnight cultures of E. coli were diluted 1 in 33 in LB, grown to early log phase at 37°C, and then added to the T84 cells at a multiplicity of infection of 100:1. Bacteria and monolayers were incubated for 3 h at 37°C in 5% CO2, after which nonadherent bacteria were removed by washing in phosphate-buffered saline (PBS) and the numbers of attached bacteria were determined by lysing the T84 cells in 100 µl of 1.0% Triton X-100 (Sigma Chemical Co., St. Louis, MO) and enumerating the bacteria on LB agar.
Alkaline phosphatase. Alkaline phosphatase activity was determined as described by Brickman and Beckwith (6). Briefly, the optical densities at 600 nm of cultures grown overnight in high- or low-phosphate medium were recorded and a measured amount of the culture was centrifuged to pellet the bacteria. The bacteria were then resuspended in 1 M Tris HCl, pH 8.0, and permeabilized with 0.1% sodium dodecyl sulfate and chloroform. The alkaline phosphatase activity was determined by using p-nitrophenol phosphate and was expressed in Miller units as the mean and standard deviation (SD) of the results of at least three separate assays.
Infection of mice. Four- to five-week-old male C57BL/6 mice were bred, housed, and maintained in the Department of Microbiology and Immunology animal facility at the University of Melbourne. Animals in this facility are certified free of infection with C. rodentium and other common bacterial, viral, and parasitic infections of laboratory mice. For single-strain infections of mice, each of nine mice per group was inoculated by oral gavage with approximately 2 x 109 CFU of an overnight culture of a test strain of C. rodentium in 200 µl of PBS. Control animals received 200 µl of sterile PBS. Fecal samples were recovered aseptically for up to 20 days after inoculation, and the number of viable C. rodentium bacteria per gram of stool was determined by plating onto selective medium. The limit of detection was 100 CFU/g feces.
For mixed-strain infections, five mice were inoculated perorally with approximately 109 CFU of a mutant or complemented mutant strain together with an approximately equal number of wild-type C. rodentium cells in 200 µl of PBS. Mice were killed 7 days after infection; their colons excised; and the contents removed, serially diluted, and spread on two LB agar plates containing appropriate antibiotics to determine the proportion of wild-type C. rodentium bacteria to mutant or complemented mutant bacteria. The ability of the mutant or trans-complemented mutant to compete with the wild-type strain was determined for three to five mice and expressed as the competitive index (CI), which was the proportion of mutant or complemented mutant to wild-type bacteria recovered from animals divided by the proportion of the mutant or complemented mutant to wild-type bacteria in the inoculum (17). Mutants with a CI of less than 0.5 were considered to be attenuated.
Colonic hyperplasia. At days 6, 10, 14, and 20 after infection, one mouse from each single-strain-infected group was killed and 4 cm of the colon, beginning at the anal verge, was excised. The contents were removed, and the colon was weighed and fixed in 10% (wt/vol) neutral buffered formalin or 10% (wt/vol) glutaraldehyde for histological examination. Formalin-fixed sections were stained with hematoxylin and eosin as described previously (17) and photographed using a Leica DC2000 digital camera. The crypt heights of well-oriented sections were measured by micrometry, with at least 10 measurements taken in the distal colon of each mouse. Glutaraldehyde-fixed sections were processed and examined by transmission electron microscopy as described previously (34).
Stool water content. The water content of feces in the distal colon of mice infected with C. rodentium was determined as described by Guttman et al. (15, 16). Briefly, 7 days after inoculation with PBS or a test strain of C. rodentium, mice were killed, and the distal 3.5 cm of the large intestines were excised. The contents of the excised intestines were removed and weighed immediately and again after drying at 37°C for 48 h. The difference between the wet and the dry weights was used to calculate the percentage of water in the gut contents.
Statistical analyses. Statistical analyses were performed using the Instat and Prism software packages (GraphPad Software, San Diego, CA). A two-tailed P value of <0.05 was taken to indicate statistical significance.
Nucleotide sequence accession numbers. The complete sequences of the pstSCAB-phoU operon and the phoB genes of EPEC strain E128012 and C. rodentium strain ICC169 have been deposited in the GenBank database under accession numbers FJ377883, FJ393267, FJ415986, and FJ415987.
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FIG. 1. Adherence of atypical EPEC strain E128012 and its derivatives to HEp-2 epithelial cells after 3 h. (A) Wild-type atypical EPEC strain E128012 showing localized-like adherence. (B) Strain E2, a representative pstS::TnphoA mutant. Five other TnphoA Pst operon mutants and strain CY88, E128012 pstCA, showed the same phenotype. (C) Strain CY88(pAC2), CY88 trans-complemented with pstCA. (D) Strain CY91, pstCA phoB double mutant of E128012. (E) Strain CY95, phoB mutant of E128012. Arrows point to examples of adherent bacteria. Giemsa stain was used.
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FIG. 2. Diagrammatic representation of the Pst operon of atypical EPEC strain E128012 showing the sites of insertion (triangles) and the orientation (black arrows) of TnphoA in the nonadherent mutants E1 to E6.
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TABLE 3. Quantitative assessment of the ability of atypical EPEC strain E128012 and its isogenic derivatives to adhere to cultured epithelial cells
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In E. coli, mutations in the pst operon lead to constitutive expression of Pho regulon genes, including phoA and phoB (44). The impact of the pstCA mutation in E128012 on the Pho regulon was assessed by measuring the expression of phoB and phoA. The expression of the phoB gene was determined by using quantitative real-time RT-PCR on strains grown in LB. These studies showed that in CY88 (pstCA mutant strain), transcription of phoB was sixfold greater than in the wild-type strain and in the trans-complemented mutant CY88 (pAC2), which was the same as the wild type in this respect. The levels of expression of alkaline phosphatase by the wild-type strain E128012 (1 Miller unit) and the complemented pstCA mutant strain CY88(pAC2) (15 Miller units) were low when the bacteria were grown in high-phosphate medium and substantially higher [E128012 and CY88(pAC2), 807 and 606 Miller units, respectively] when they were grown in low-phosphate medium. In contrast, CY88 exhibited a constitutive Pho phenotype (>1,000 Miller units) in both high- and low-phosphate media. Together these findings indicate that the pstCA mutation in E128012 resulted in constitutive elevated expression of phoB, phoA, and presumably, other genes in the Pho regulon.
Adherence to epithelial cells by a pstCA phoB double mutant. Because inactivation of pstCA results in constitutive expression of the PhoR/PhoB regulon (23), we hypothesized that the reduced adherence phenotype of CY88 might be restored if PhoB were also inactivated in CY88. Accordingly, we deleted phoB in CY88 to generate a pstCA phoB double-deletion mutant, named CY91. This strain adhered to HEp-2 and T84 cells to an extent similar to the wild-type EPEC strain (P > 0.5, two-tailed Student's t test) (Table 3), indicating that constitutive expression of one or more genes of the Pho regulon was responsible for the relatively reduced adherence of CY88. Deletion of phoB alone in wild-type E128012 did not affect cell adherence (Fig. 1).
Contribution of pstCA to the virulence of C. rodentium for mice. As there is no convenient animal model of infection with atypical EPEC, we used Citrobacter rodentium to determine if the Pst operon contributes to the virulence of A/E enterobacteria. C. rodentium strain ICC169 is a natural pathogen of mice that is frequently used as a model of infection with A/E strains of E. coli (5). When fed to mice, C. rodentium colonizes the intestine in large numbers and causes diarrhea accompanied by A/E lesions and colonic hyperplasia, which is used as a quantitative indicator of the severity of infection (5). An insertional deletion was made in the pstCA gene of C. rodentium ICC169 to create the pstCACR mutant, ICA15. This strain and its trans-complemented derivative, ICA15(pAC4), grew at the same rate as each other and as the parent strain under various conditions (data not shown). In mixed-infection experiments, four- to five-week-old C57BL/6 mice were infected with wild-type C. rodentium and ICA15 or ICA15(pAC4) in a 1:1 ratio. Seven days later, the mice were killed and the ability of the C. rodentium strains to compete with each other in vivo was assessed by enumerating the test bacteria in the colon. The results showed that strain ICA15 was out-competed by the wild-type with a CI of 0.11 (P = 0.02, two-tailed Student's t test). When ICA15 was complemented with pAC4, its ability to compete successfully with the wild-type strains was restored (CI = 0.7, P = 0.12).
In single-strain infections, the ability of the pstCACR mutant, ICA15, to colonize the mouse intestine was significantly less than that of the wild-type, as evidenced by maximum mean counts of 4.2 x 104 CFU/g feces and 1.9 x 108 CFU/g feces for the mutant and wild-type, respectively (P = 0.002, two-tailed Student's t test) (Fig. 3). In contrast, the pstCA trans-complemented strain, ICA15(pAC4), reached a maximum mean of 5.2 x 107 CFU/g feces, which was comparable to that of the wild-type strain (P > 0.5). These results indicate that C. rodentium requires pstCA to colonize the mouse intestine.
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FIG. 3. Colonization of C57BL/6 mice with derivatives of C. rodentium ICC169. Results are expressed as the mean log10 CFU/g feces from at least five mice at selected time points after inoculation. Mice received approximately 2 x 109 CFU via oral gavage of wild-type C. rodentium strain ICC169 (); a pstCACR mutant strain, ICA15 ( ); a trans-complemented mutant, ICA15(pAC4) ( ); or a pstCA phoBCR double mutant, ICA18 ( ). The limit of detection was 100 CFU/g feces.
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TABLE 4. Crypt heights and colon weights of mice 14 days after infection with derivatives of C. rodentium
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FIG. 4. Transmission electron micrographs of sections of mouse colon 14 days after oral inoculation with wild-type C. rodentium ICC169 (A) or ICA15, an isogenic pstCACR mutant of C. rodentium ICC169 (B), showing extensive A/E lesions. Scale bar, 1 µm. Note that although the numbers of adherent bacteria appear similar in the two panels, C. rodentium adheres to the intestinal epithelium in patches, making electron microscopy an unsuitable method for quantifying adhesion.
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TABLE 5. Water content of feces collected from the distal colons of mice 7 days after infection with derivatives of C. rodentium
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A key component of the Pho regulon is the Pst system, which captures periplasmic inorganic phosphate and transports it into the cytosol. Pst comprises four elements: PstS, a periplasmic protein that binds inorganic phosphate; PstC and PstA, which form an inner membrane channel for phosphate transport; and PstB, a permease that provides the energy needed to transport phosphate (23). The Pst system also regulates the entire Pho regulon by preventing the activation of PhoB in phosphate-rich environments. Thus, in E. coli, mutations in the Pst system lead to constitutive expression of the Pho regulon regardless of phosphate concentration. Although PhoB is normally activated by PhoR, it is subject to cross-regulation by other sensor proteins in response to a variety of environmental signals other than phosphate (23). At least six such histidine kinases, QseC, ArcB, CreC, KpdD, BaeS, and EnvZ, can activate PhoB in the absence of PhoR (45). The Pho regulon is also interrelated with the stress response (23).
Despite extensive research on phosphate uptake and phosphate-related gene regulation in bacteria, evidence of the contribution of the Pho regulon to virulence gene expression has emerged only recently (reviewed in reference 23). For example, mutations in pst genes can interfere with the expression of virulence-associated type III protein secretion systems of Edwardsiella tarda and Salmonella enterica (3, 26, 31) and diminish the virulence of avian pathogenic E. coli for chickens (22). In addition, pstS mutants of porcine EPEC show reduced adherence to piglet ileal explants (2), and a phoB mutant of Vibrio cholerae showed reduced ability to colonize the rabbit small intestine (43). Given that the intestine contains high concentrations of phosphate, these observations suggest that stimuli other than phosphate concentrations are responsible for the reduced virulence of some Pho regulon mutants. Among the Pho-regulated systems that may be relevant in this regard are responses to changes in pH and other environmental stimuli; the expression of surface components, including adhesins; and the capacity to form biofilms (reviewed in reference 23).
In this study, we used TnphoA mutagenesis to identify adhesins of E. coli E128012, an atypical EPEC strain of proven pathogenicity (25) that adheres to HEp-2 cells in a localized-like pattern. In all six PhoA-positive, nonadherent mutants that we identified, TnphoA had inserted into the pst operon. The results of subsequent sequence and deletion analysis and trans-complementation studies confirmed that strain E128012 requires pstCA to adhere to HEp-2 and T84 epithelial cells. In addition, by showing that adhesion could be restored to a pstCA mutant of E128012 by inactivating phoB, we established that the contribution of pstCA to bacterial adherence is exerted via the Pho regulon. Similar results were obtained in mouse infection studies with site-directed pstCA and phoB mutants of C. rodentium, thus establishing the role of the Pho regulon in the virulence of some A/E strains of enterobacteria. In addition, our finding that pst mutants of EPEC and C. rodentium grew equally well in high- and low-phosphate medium indicated that phosphate starvation was not responsible for the attenuation of these strains and suggested that, as with some other enteric pathogens, Pho regulation in these bacteria may be effected via cross-regulation by signals other than phosphate concentration (23).
Recently, Ferreira and Spira reported that the pst operon enhances the adhesion of E. coli LRT9, a typical EPEC strain, to cultured epithelial cells (13). They concluded that the reduced cell adherence of a pst mutant of LTR9 was not mediated via the Pho regulon, because adherence was not restored by mutating phoB. They also found that the pst mutant showed reduced expression of the principal adhesins of typical EPEC, namely, Bfp and intimin, partly as a consequence of reduced expression of the per operon, which positively regulates the expression of bfp and several LEE-encoded genes, including eae. Our findings are in broad agreement with those of Ferreira and Spira regarding the requirement by EPEC for an intact pst operon to adhere to epithelial cells and that signaling through pst is probably unrelated to phosphate concentrations, but there are several important points of difference. First, atypical EPEC and C. rodentium lack the adherence factor plasmid, pEAF, and hence do not express Bfp or Per. Second, attenuation of the pst mutants investigated in this study was clearly mediated through the Pho regulon, because in pst mutants of both EPEC and C. rodentium, the wild-type phenotype was restored to the mutants after inactivation of phoB. Third, the attenuation of a pstCA mutant of C. rodentium for mice was evidently not mediated via reduced expression of LEE-encoded genes, given that the expression of two key LEE genes, namely ler and eae, was normal in the pstCA mutant and that the mutant evoked A/E lesions indistinguishable in extent and severity from those induced by the parent strain in the colons of mice (Fig. 4). The observation that mice infected with a pst mutant of C. rodentium developed A/E lesions but not colonic hyperplasia shows that these two pathological outcomes are not interdependent. This confirms our previous observations that a prerequisite of colonic hyperplasia is extensive colonization of the colon by C. rodentium (21, 24) and suggests that any situation which reduces colonization is likely to affect hyperplasia.
In conclusion, we have shown that pst genes acting through the Pho regulon are required by atypical EPEC to adhere to epithelial cells and by C. rodentium to colonize the mouse intestine and cause diarrhea. Although we did not achieve our original aim, namely, to identify novel adhesins of atypical EPEC, our findings indicate that adherence of atypical EPEC and C. rodentium is mediated by one or more adhesins that are negatively regulated either by PhoB itself or by PhoB-regulated genes. We are currently using microarray analysis to identify downstream genes that EPEC and C. rodentium require for adherence.
This work was supported by grants from the Australian National Health and Medical Research Council.
Published ahead of print on 2 March 2009. ![]()
Present address: Center for Vaccine Development, University of Maryland School of Medicine, MD 21201. ![]()
These authors contributed equally to this work. ![]()
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80 transducing phages. J. Mol. Biol. 96:307-316.[CrossRef][Medline]
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