ABSTRACT
Microsporidia are eukaryotic, obligate intracellular organisms defined by small spores that contain a single invasion organelle, the polar tube, which coils around the interior of the spore. When these parasites infect host cells, the polar tube is discharged from the anterior pole of the spore, pierces the cell, and transfers sporoplasm into the cytoplasm of the host. Three polar tube proteins (PTP1, PTP2, and PTP3) have been identified in this structure. The interactions of these proteins in the assembly and function of the polar tube are not known. This study was undertaken to examine the protein interactions of the Encephalitozoon cuniculi polar tube proteins (EcPTPs). Immunofluorescence and immunoelectron microscopy confirmed the colocalization of EcPTP1, EcPTP2, and EcPTP3 to the polar tube. Experiments using cross-linkers indicated that EcPTP1, EcPTP2, and EcPTP3 form a complex in the polar tube, which was confirmed by immunoprecipitation using EcPTP1 antiserum. Yeast two-hybrid analysis revealed that full-length EcPTP1, EcPTP2, and EcPTP3 interact with each other in vivo. Both the N and C termini of EcPTP1 were involved in these interactions, but the central region of this protein, which contains a repetitive motif, was not. Further studies of polar tube proteins and their structural interactions may help elucidate the formation of the polar tube during the invasion process.
The Microsporidia are obligate intracellular parasitic protists (28). While historically they have been considered “primitive” protozoa, molecular phylogenetic analysis has led to the recognition that these organisms are not primitive but degenerate protists and that they are most closely related to fungi and not to protozoa (18). The Encephalitozoonidae have genomes under 3.0 Mb, making them among the smallest eukaryotic nuclear genomes identified (25). Microsporidian genome data are available at EuPathDB (http://eupathdb.org/eupathdb/ ). There is a high degree of gene conservation among the Microsporidia (3).
The Microsporidia are ubiquitous in the environment and infect almost all animal phyla (invertebrate and vertebrate hosts), including other protists. They can produce a wide range of clinical diseases. Diarrhea associated with microsporidiosis and HIV infection was first reported in 1985 (7). In addition to gastrointestinal tract involvement, it has been recognized that microsporidia can infect virtually any organ system, causing encephalitis, ocular infection, sinusitis, myositis, and disseminated infections (28). The phylum Microsporidia contains more than 1,200 species distributed over 150 genera. Species in the following genera cause human infections: Nosema, Pleistophora, Encephalitozoon, Enterocytozoon, Septata (reclassified as Encephalitozoon), Anncaliia, Trachipleistophora, Brachiola (reclassified as Anncaliia), Vittaforma, and Microsporidium (28).
Microsporidia form unicellular spores that are environmentally resistant and characteristic of the phylum; however, spore size and shape vary depending on the species. The spore coat consists of an electron-dense, proteinaceous exospore, an electron-lucent endospore composed of chitin and protein, and an inner membrane or plasmalemma (2, 24). Spore coat proteins have adhesion domains that may facilitate the binding of spores to either the cell surface or mucus of the gastrointestinal tract prior to germination (22). A defining characteristic of all microsporidia is an extrusion apparatus that consists of a polar filament that coils around the sporoplasm and is attached to the inside of the anterior end of the spore by an anchoring disk (23, 26, 28). During germination, the polar filament forms a hollow tube that brings the sporoplasm into intimate contact with the host cell, providing a means of transfer of the sporoplasm to the host cell without exposure to the extracellular environment (23, 26, 28). The mechanism by which the polar tube interacts with the host cell membrane is not known, but it may require the participation of host cell proteins, such as actin (9). If a spore is phagocytosed by a host cell, germination can occur, enabling the polar tube to pierce the phagocytic vacuole, thereby delivering the sporoplasm into a host cell's cytoplasm (10).
It is probable that the polar tube evolved prior to divergence of the Microsporidia into various genera and is not the result of the convergence of independently evolved polar tube structures in different microsporidia. The proteins comprising the polar tube are likely to be members of a protein family that evolved from the same ancestral genes. The polar tube resists dissociation in detergents, acids, and chaotropic agents but is soluble in reducing agents, such as 2-mercaptoethanol or dithiothreitol (13-17). These solubility properties have facilitated the development of a method for the purification of these proteins (13-17). Proteomic and genetic studies have defined some of the proteins of the polar tube and spore wall (31) as well as the presence of O mannosylation on these proteins (30, 32). Three distinct polar tube proteins (PTPs) have been identified: PTP1, a proline-rich protein (6, 15); PTP2, a lysine-rich protein (4, 5); and PTP3, a large protein over 135 kDa in size (20).
To understand the formation of the polar tube and the function of its various components, it is necessary to understand how PTP1, PTP2, and PTP3 interact with each other as well as any other components of the polar tube. The preservation of cysteine residues in the various PTP1s suggests that these residues may be involved in inter- and intraprotein linkages and, consequently, in the formation of the tube. As PTP1 is the major protein present in the polar tube of the Microsporidia, we focused on studying possible interactions between this major protein (Encephalitozoon cuniculi PTP1 [EcPTP1]) with itself and with EcPTP2 and EcPTP3. In this paper, by using a yeast two-hybrid system, a standard genetic method for exploring protein-protein interactions, we demonstrate that EcPTP1, EcPTP2, and EcPTP3 interact with each other. In addition, cross-linking experiments confirm the existence of a protein complex containing EcPTP1, EcPTP2, and EcPTP3.
MATERIALS AND METHODS
Culture and production of microsporidian spores. Encephalitozoon cuniculi was cultured at 37°C in RK13 cells (rabbit kidney cell line CCL37; American Type Culture Collection, Rockville, MD) as previously described (17). Infected RK13 cells were maintained in continuous culture in minimum essential medium (MEM) supplemented with 7% fetal calf serum and 1% penicillin-streptomycin-amphotericin B (Invitrogen, Carlsbad, CA). Cultures were subpassaged every 3 weeks. Supernatants from infected flasks containing microsporidian spores were collected twice weekly and replaced with fresh medium. Spore concentrations were determined by counting using an improved Neubauer hemocytometer.
Polar tube protein isolation protocol.Polar tube proteins were isolated from other proteins as previously described (14). Spores (3 × 107) in 1% SDS were disrupted with 0.5-μm acid-washed glass beads (Sigma, St. Louis, MO) for 4 min on a Mini-Beadbeater (BioSpec Products, Bartlesville, OK). The disrupted spore suspension was separated from the glass beads and washed five times with 1% SDS, followed by a brief wash with 9 M urea to remove sporoplasm released from broken spores and soluble spore coat proteins. The pellet was then incubated with 0.5 ml of 2% dithiothreitol (DTT) in 1× phosphate-buffered saline (PBS) (pH 7.4), 10 μg/ml of aprotinin and leupeptin (Sigma, St. Louis, MO), and 5 mM EGTA at room temperature for 2 h to solubilize the polar tubes. Protein concentration was determined using the Bio-Rad protein assay (Bio-Rad, Hercules, CA).
Cloning and expression of EcPTP1, -2, and -3.DNA was prepared from E. cuniculi by disrupting spores with 0.5-μm acid-washed glass beads (Sigma, St. Louis, MO) for 2 min on a Mini-Beadbeater (BioSpec Products, Bartlesville, OK), followed by routine phenol chloroform extraction, as previously published (15). EcPTP1, without its signal sequence of 60 bases at the 5′ terminus, was amplified by PCR using the following primers (cloning and/or restriction sites are underlined): EcPTP1-Forward (GACGACGACAAGATGTATTCAGCAACCGCA) and EcPTP1-Reverse (GAGGAGAAGCCCGGTCTAGCAGCATTGG). EcPTP2 and EcPTP3 (truncated) genes were PCR amplified using primer pairs EcPTP2-Forward-EcoRI (GCTGAATTCGTTGTTCCACAGCCCGC), EcPTP2-Reverse-XhoI (CTCGAGTTACTCTAGACCCTCGCCG) and EcPTP3-Forward-EcoRI (GGAATTCAAGCCGCACAACC), EcPTP3-Reverse-NotI (ATTTGCGGCCGCCTATTCCTTCTT), respectively. PCR was performed using PCR SuperMix (Invitrogen, Carlsbad, CA) under the following conditions: 40 cycles of 94°C for 30 s, 65°C for 30 s, and 72°C for 1.2 min. The amplified EcPTP1 gene was cloned into a pET-41 Ek/LIC vector (Novagen, Gibbstown, NJ) at the ligation-independent cloning site, the EcPTP2 gene was cloned into the EcoRI-XhoI site of pGEX-4T1, and the EcPTP3 gene was cloned into the EcoRI-NotI site of pGEX-4T1. All of the resultant vectors were sequenced to confirm that the correct genes had been cloned and that no mutations had been introduced by the PCR process. These vectors were transfected into BL21(DE3) cells, and the recombinant EcPTP1, EcPTP2, and EcPTP3 proteins were expressed by overnight induction at 37°C using autoinduction medium (Novagen, San Diego, CA) for EcPTP1-pET41 Ek/LIC and 1 M IPTG (isopropyl-β-d-thiogalactopyranoside) for EcPTP2-pGEX-4T1 and EcPTP3-pGEX-4T1.
Expressed recombinant proteins were purified by glutathione S-transferase (GST) affinity chromatography with Sepharose beads using the manufacturer's standard conditions following lysis of bacterial cells by sonication in lysis reagent (50 mM Tris [pH 7.5], 0.1% NP-40, 150 mM NaCl, 0.1 mM DTT, and protease inhibitor cocktail [Pierce Biotechnology, Rockford, IL]). The beads were then incubated with 2× gel sample buffer in boiling water for 5 min and the eluted proteins run on a 10% SDS-PAGE gel. The gels were electrotransferred to an Immobilon-P membrane (Millipore, Bedford, MA) using standard conditions. Immunoblot analysis was carried out using an anti-GST monoclonal antibody (gift of Peter Davis, Albert Einstein College of Medicine) at a 1:1,000 dilution, a peroxidase-conjugated anti-mouse secondary antibody at a 1:5,000 dilution (Pierce Biotechnology, Rockford, IL), and the ECL Western blotting detection reagent (Amersham International, Buckinghamshire, United Kingdom). This confirmed the expression and purification of recombinant proteins of the expected size for recombinant EcPTP1 (rEcPTP1), rEcPTP2, and rEcPTP3.
Polyclonal antibody production.BALB/c mice were used to produce antibodies using rEcPTP1, rEcPTP2, and rEcPTP3. Expressed recombinant proteins were purified by GST affinity chromatography with Sepharose beads as described above. The beads were then incubated for 5 min in boiling water with 2× gel sample buffer and the eluted proteins run on a 10% SDS-PAGE gel which was stained with Coomassie blue. The band containing the expressed protein was cut out of the SDS-PAGE gel and homogenized in PBS, and the polymerized acrylamide was removed by passage of the homogenate through a 0.2-μm Nalgene filter. The average concentration of protein obtained was 1 mg per ml with a yield of about 300 μl. Purified protein was emulsified with Hunter's TiterMax adjuvant (CytRx, Norcross, GA) and injected into groups of 3 mice for each protein. Each mouse received about 100 μg of recombinant protein. Four weeks later, the animals received a second injection of purified protein. Sera from injected mice were collected a week after the last injection, aliquoted into 25-μl samples, and stored at −20°C.
Immunoblot analysis.Lysates of E. cuniculi spores were placed in 2× gel sample buffer (100 mM Tris [pH 6.8], 2% SDS, 5% 2-mercaptoethanol, 15% glycerol, 0.01% bromophenol blue) and then separated using 10% SDS-PAGE. Gels were electrotransferred to Immobilon-P membranes (Millipore, Bedford, MA) using 25 mM Tris, 480 mM glycine, and 20% (vol/vol) methanol buffer and then blocked with 5% nonfat dry milk in PBS. Blots were incubated for 1 h with antibody to rEcPTP1, rEcPTP2, or rEcPTP3 at a 1:1,000 dilution, washed in PBS, incubated for 1 h with alkaline phosphatase-conjugated anti-mouse antibody (Pierce Biotechnology, Rockford, IL) at a 1:5,000 dilution, and then washed in PBS. The reaction was detected with BCIP (bromochloroindolyl phosphate)-nitroblue tetrazolium (NBT) using standard protocols.
Electron microscopy. E. cuniculi-infected host cells were fixed for 20 min at room temperature in 2% paraformaldehyde and 1% glutaraldehyde in PBS and rinsed four times in PBS. The samples were dehydrated in 50, 70, and 85% ethanol, infiltrated with complete LR White resin, placed into gelatin capsules with fresh LR White resin, and polymerized with UV light at room temperature for 24 h. The sections were collected onto Formvar-coated Ni grids.
For immunoelectron microscopy, the sections were blocked at 4°C overnight in PBS containing 5% bovine serum albumin (BSA), 5% normal goat serum, and 0.001% Tween 20. The sections were incubated at 37°C for 1 h in primary antibody (anti-rEcPTP1, anti-rEcPTP2, or anti-rEcPTP3) at a 1:100 dilution in PBS containing 5% BSA and 0.001% Tween 20. The sections were then rinsed three times in PBS, blot dried between rinses, and incubated at 37°C for 1 h with anti-mouse 6-nm gold bead antibody (Jackson ImmunoResearch, West Grove, PA) in PBS containing 5% BSA and 0.001% Tween 20. The sections were then rinsed three times in PBS and three times in water and air dried overnight. All sections were then stained with 1% uranyl acetate for 30 min, rinsed three times in water, air dried, and examined using a Techni-12 electron microscope at 80 to 100 kV. Images were recorded on Kodak 4489 film and then scanned into Adobe Photoshop.
Immunofluorescent staining.A T25 flask of RK13 cells infected with E. cuniculi was harvested with trypsin-EDTA, and the cell suspension was added to three Nunc two-chamber slides. The slides were incubated at 37°C for 48 h until the cells were 50% confluent, the culture medium was removed, and the cells were rinsed in PBS, fixed with 4% PBS-buffered formalin for 15 min, and then rinsed in PBS. Following this, the slides were blocked in 10% fetal bovine serum (FBS) in PBS for 1 h at 37°C. The cultures at this point contained spontaneously germinated spores as well as intact extracellular spores, intracellular proliferative life stages, and mature spores. After the cultures were blocked, 100 μl of anti-rEcPTP1 diluted (1:500) in PBS-FBS was added to one chamber of slide 1 and one chamber of slide 2. Anti-rEcPTP2 was added to one chamber of slide 3. The second chamber of slides 1 through 3 were used as controls, so no primary antibody was added to these chambers. Instead, a 1% solution of BSA fraction V in PBS diluted 1:500 in PBS-FBS was substituted for the antibody. All the slides were then incubated for 1 h at 37°C. The chambers were then rinsed three times with PBS and incubated with goat anti-mouse antibody labeled with horseradish peroxidase (HRP)-labeled secondary antibody (Nanoprobes, Inc., Yanpank, NY) for 1 h at 37°C and then rinsed three times with PBS. The slides were then incubated with Tyramide Signal Amplification reagent (Molecular Probes, Eugene, OR) per the manufacturer's instructions. Slides 1 and 2 containing anti-rEcPTP1 and their controls were conjugated with Alexa Fluor 488 (Molecular Probes, Eugene, OR) at a 1:100 dilution for 10 min. Slide 3 containing anti-rEcPTP2 and its control was conjugated with Alexa Fluor 594 (Molecular Probes, Eugene, OR) at a 1:100 dilution for 10 min. All the chambers were then rinsed several times with PBS. After this first antibody staining, all the chambers were quenched with 1% hydrogen peroxide in PBS for 5 min, followed by three rinses in PBS, and then they were blocked as previously described. The same procedures, dilutions, and incubations were followed for the second antibody incubation. Both chambers of slide 1 were incubated with anti-rEcPTP2 and conjugated with Alexa Fluor 594 (Molecular Probes, Eugene, OR) at a 1:100 dilution for 10 min. Slide 2 was incubated with anti-rEcPTP3 and then conjugated with Alexa Fluor 594 (Molecular Probes, Eugene, OR) at a 1:100 dilution for 10 min. Slide 3 was incubated with anti-rEcPTP3 and conjugated with Alexa Fluor 488 (Molecular Probes). All the slides were rinsed several times with PBS and drained, gaskets and chambers were removed, and the slides were mounted in DABCO [1,4-diazabicyclo(2,2,2)octane] (Sigma, St. Louis, MO) and coverslipped. After the various reactions and rinses were completed, the slides were examined on a Zeiss Axiovert 200 using 10×, 20×, and 40× objectives in combination with bright-field, phase, and fluorescence illumination. Areas of interest were then identified on each slide and examined on a Zeiss LSM 510 scanning confocal microscope with a 40× high-resolution objective (Rutgers-Newark Imaging Center). Samples were illuminated with both 488-nm and 565-nm laser lines. Images were collected on a 12-bit photomultiplier tube. Pinhole settings were 1 Airy unit for maximum resolution.
Immunoprecipitation.Protein samples were prepared by glass bead disruption of E. cuniculi spores followed by extraction of polar tube proteins in a 2.5% SDS-100 mM DTT solution containing 10 μg/ml of aprotinin and leupeptin. Protein samples were diluted 50-fold in PBS, and then the diluted protein sample was incubated for 30 min on ice with 4 mM 3,3′-dithiobis(sulfosuccinimidylpropionate) (DTSSP; Pierce), a water-soluble, homobifunctional, thiol-cleavable, and membrane-impermeable cross-linker. The reaction was quenched by the addition of 1 M Tris, pH 7.5, to a final concentration of 50 mM. Samples were centrifuged at 1,000 × g for 30 min and suspended in SDS sample buffer with or without 2-mercaptoethanol (25% vol/vol) for analysis by SDS-PAGE or immunoblotting. As a control, the same reaction was performed without the addition of DTSSP.
Cross-linked polar tube protein extracts prepared from E. cuniculi PTP lysates as described above were immunoprecipitated using anti-EcPTP1 antibody. To create the immunoaffinity reagent, 10 μl of anti-EcPTP1 or anti-mouse IgG was incubated overnight at 4°C with 30 μl of protein A in 500 μl (final volume) of PBS, with agitation. The antibody-protein A affinity reagent was then isolated by centrifugation, washed with PBS, and incubated overnight at 4°C with 100 μg of E. cuniculi cross-linked protein lysate, with agitation. The antigen-antibody-protein A complexes were then centrifuged, washed three times with PBS, added to 2× gel sample buffer in boiling water for 5 min, and used for SDS-PAGE. Immunoblot analysis was then performed using anti-rEcPTP1, anti-rEcPTP2, and anti-rEcPTP3 as described above.
Yeast two-hybrid analysis.Coding regions for full-length (FL) EcPTP1 were amplified from E. cuniculi DNA using the following primers for each construct (cloning and/or restriction sites are underlined): EcPTP1-Full length-Forward-EcoRI (GTCGAATTCTATTCAGCAACCGCACTGTG), EcPTP1-Full length-Reverse-XhoI (CCGCTCGAGCTAGCAGCATTGGACAGC), EcPTP1-N terminus-Forward-EcoRI (CGGAATTCTCAGCAACCGCACTGTGCAG), Reverse-EcPTP1-N terminus-SalI (ACGCGTCGACTCCCTGACACAAAGTGGCT), EcPTP1-C terminus-Forward-EcoRI (CGGAATTCCAGGCCATGCCTAGCACTC), EcPTP1-C terminus-Reverse-SalI (ACGCGTCGACCTAGCAGCATTGGACAGCAGT), EcPTP1-Central-Forward-EcoRI (CCGGAATTCGGAACATCCGGTATTCCTG), and EcPTP1-Central-Reverse-SalI (ACGCGTCGACCTGTCCCTGCTGTCCAG).
Coding regions for EcPTP2 and EcPTP3 were amplified using the following constructs: EcPTP2-Full length-Forward-EcoRI (GTCGAATTCGTTGTTCCACAGCCCGC), EcPTP2-Full length-Reverse-XhoI (CCGCTCGAGTTACTCTAGACCCTCGCGG), EcPTP3-Full length-Forward-EcoRI (GGAATTCTCAAGCTCGCATGCCGTC), and EcPTP2-Full length-Forward-EcoRI-Reverse-SalI (GTCGACCTAACGGGCTACCTTTCC).
Following amplification, each PCR product was then digested with its corresponding enzymes and inserted into the corresponding sites in the yeast two-hybrid vectors pAD and pBD (BD Biosciences Clontech, San Jose, CA). The identity of all clones was confirmed by sequencing the completed constructs.
For interaction studies, competent YRG-2 yeast cells were transformed simultaneously with bait and prey constructs and cultured under a high-stringency screen according to the manufacturer's protocol (Stratagene, La Jolla, CA). Briefly, 100 μl of competent yeast cells, 100 μg of herring sperm DNA, and 10 μg each of pBD construct and pAD construct were added to a microcentrifuge tube and gently mixed. Following this, 600 μl of Tris-EDTA (TE)-Li acetyl-polyethylene glycol (PEG) solution was added, the solution was mixed by vortexing, the tube was incubated at 30°C for 30 min with shaking at 200 rpm, and then 70 μl of dimethyl sulfoxide (DMSO) was added. The samples were then subjected to heat shock at 42°C for 15 min and placed on ice for 10 min. Yeast cells were pelleted by centrifugation at 3,000 rpm for 10 s, resuspended in 0.5 ml TE buffer, and plated onto 150-mm SD-selective plates (250 μl on each plate) that did not contain leucine, tryptophan, or histidine. The plates were incubated at 30°C for 2 to 4 days until colonies appeared. Constructs pADwt and pBDwt were used as the positive control, and pADwt with pLaminC was used as the negative control. Several independent colonies from each interaction screen (i.e., EcPTP1-EcPTP2, EcPTP1-EcPTP3, EcPTP2-EcPTP3, etc.) were chosen and cultured on Leu-, Trp-, His-, and Ade-lacking SD plates at 30°C for 30 h. Those colonies that grew up from Leu-, Trp-, His-, and Ade-lacking SD plates were sequenced to confirm that interacting vectors contained the genes of interest.
RESULTS
Protein expression and polyclonal antibody production.EcPTP1, EcPTP2, and EcPTP3 (truncated) were expressed as fusion proteins as noted in Materials and Methods (data not shown), and polyclonal murine antibodies were prepared using these recombinant proteins. These antisera were able to detect bands corresponding to EcPTP1, EcPTP2, and EcTPTP3 in E. cuniculi lysate (Fig. 1, top). No reactivity was seen in preimmune sera (data not shown). All of these antisera, anti-EcPTP1, anti-EcPTP2, and anti-EcPTP3, reacted with the E. cuniculi polar tube by immunoelectron microscopy (Fig. 1, bottom; polar tubes indicated by arrows). By indirect immunofluorescence assay (IFA), anti-EcPTP1 (Fig. 2A and G), anti-EcPTP2 (Fig. 2D and H), and anti-EcPTP3 (Fig. 2B and E) reacted with spontaneously extruded polar tubes from E. cuniculi. These sera also reacted with polar tubes from E. cuniculi spores germinated by exposure to 1% H2O2. The IFA staining seen with anti-rEcPTP1, anti-rEcPTP2, and anti-rEcPTP3 overlapped, suggesting that these proteins were found at similar locations on the polar tubes (Fig. 2C, F, and I). In extruded spores, reactivity of these sera could sometimes be demonstrated to also occur in the residual spores and sporoplasms, which may represent cross-reactive antigens or residual PTPs in these structures. None of the sera had reactivity to the surfaces of intact nongerminated spores (data not shown).
Analysis of rPTP antisera. Top, immunoblot analysis. Protein lysates were prepared from E. cuniculi run on a 10% SDS-PAGE gel, transferred to nitrocellulose, and examined using anti-rPTP. Anti-rEcPTP1 (1:5,000 dilution), anti-rEcPTP2 (1:5,000 dilution), and anti-rEcPTP3 (1:1,000 dilution) were used. Bands corresponding to EcPTP1, EcPTP2, and EcPTP3 were seen in the corresponding immunoblots. No bands were seen in preimmune sera (data not shown). Bottom, immunoelectron microscopy. E. cuniculi spores (see Materials and Methods for fixation details). (A) Anti-rEcPTP1 (1:100 dilution); (B) anti-rEcPTP2 (1:100 dilution) (insert is an enlarged section of the image); and (C) anti-rECPTP3 (1:100 dilution). All of the antisera react with the polar tube (arrows). Bar length is 600 nm. Gold particles are 6 nm. (D) Representative negative control (preimmune serum at 1:100 dilution). No gold labeling is seen. EN, endospore; Ex, exospore; ANT, anterior portion of the polar filament; R, ribosomes; arrows, polar tubes. Bar length is 500 nm.
Immunofluorescent analysis of rPTP antibodies. Confocal images of extruded polar tubes of E. cuniculi that were initially incubated with one of the three polar tube antibodies, anti-rEcPTP1, anti-rEcPTP2, or anti-rEcPTP3. After their initial incubation with their respective antibody and tyramide signal-amplified fluorescent label, the polar tubes were dually labeled with a second polar tube antibody and a tyramide fluorescent label (see Materials and Methods). Control preimmune sera did not display any reactivity in this assay. (A, B, C) Images of an E. cuniculi polar tube incubated with anti-rEcPTP1 labeled with Alexa Fluor 488 (green) (A) and anti-rEcPTP3 labeled with Alexa Fluor 594 (red) (B). Panel C is the merged image. Note the presence of both red and green signals along the polar tube and areas of yellow signal where they overlap. Bar length for the group is 5 μm, as shown in panel A. (D, E, F) Images of an E. cuniculi polar tube incubated with anti-rEcPTP2 labeled with Alexa Fluor 488 (green) (D) and anti-rEcPTP3 labeled with Alexa Fluor 594 (red) (E). Panel F is the merged image. Note the presence of both red and green signals along the polar tube and areas of yellow signal where they overlap. Bar length for the group is 5 μm, as shown in panel D. (G, H, I) Images of an E. cuniculi polar tube incubated with anti-rEcPTP1 labeled with Alexa Fluor 488 (green) (G) and anti-rEcPTP2 labeled with Alexa Fluor 594 (red) (H). Panel I is the merged image. Note the presence of both red and green signals along the polar tube and areas of yellow signal where they overlap. Bar length for the group is 5 μm, as shown in panel G.
PTP1, PTP2, and PTP3 interact to form a large protein complex.When polar tube extract was cross-linked using DTSSP, a water-soluble chemical cross-linker, an aggregate was formed at the top of an SDS-PAGE gel which disappeared with 2-mercaptoethanol (25% vol/vol) treatment, which breaks the S—S bond of the cross-linker (Fig. 3A). Immunoblot analysis of cross-linked proteins, immunoprecipitated with anti-rEcPTP1, demonstrates that EcPTP1, EcPTP2, and EcPTP3 are detected (Fig. 3B). These data suggest that anti-EcPTP1 was able to pull down a cross-linked protein complex that included EcPTP1, EcPTP2, and EcPTP3. We therefore sought to investigate which of these proteins could associate with each other.
EcPTP1, EcPTP2, and EcPTP3 form a protein complex. (A) SDS-PAGE analysis. Coomassie blue-stained gel of protein samples made from E. cuniculi spores, cross-linked with 4 mM DTSSP, without (−) or with (+) treatment with 2-mercaptoethanol (25% vol/vol). Protein markers are in kDa. A large complex (arrow) at the top of the gel disappeared with mercaptoethanol treatment. (B) Immunoprecipitation analysis. Protein samples were extracted from E. cuniculi, cross-linked with DTSSP, and then immunoprecipitated with a control anti-mouse IgG (lane 2) or with anti-rEcPTP1 (lane 3). Lane 1 shows the protein markers (kDa standards). Immunoprecipitates were treated with gel sample buffer (containing reducing agents) and run on 12% SDS-PAGE, transferred to nitrocellulose, and probed with anti-rEcPTP1 (1:2,000), anti-rEcPTP2 (1:2,000), or anti-rEcPTP3 (1:2,000). Reactions were detected with an alkaline phosphatase-conjugated anti-mouse IgG (1:5,000) and detected with BCIP-NBT. Anti-rEcPTP1 was able to precipitate a complex which contained EcPTP1, EcPTP2, and EcPTP3. The control antiserum did not precipitate this complex.
Yeast two-hybrid studies of PTP interactions.The possibility of an interaction among the various PTPs (i.e., EcPTP1, EcPTP2, and EcPTP3) was investigated using yeast two-hybrid analysis. In these experiments, the EcPTPs were analyzed in all possible pair-wise combinations, fused to either the bait vector or prey vector. Full-length EcPTP1 (EcPTP1-FL), EcPTP2-FL, and EcPTP3-FL genes were used as the bait and EcPTP1-FL, EcPTP2-FL, and EcPTP3-FL as the prey to determine if these proteins interacted in vivo using a yeast two-hybrid system. These interactions were repeated by switching the prey and bait vectors. Figure 4 demonstrates that the full-length EcPTP1 protein interacts, in vivo, with full-length EcPTP1, EcPTP2, and EcPTP3 and that full-length EcPTP2 and EcPTP3 also interact with each other in all possible combinations. This is consistent with the hypothesis that EcPTP1 can interact with itself in the formation of the polar tube as well as with other polar tube proteins. It also suggests that PTP2 and PTP3 can also interact with themselves as well as with other PTPs.
Yeast two-hybrid analysis of PTP interactions. This illustrates the interactions of the pAD and pBD (bait and prey) constructs containing full-length EcPTP1, full-length EcPTP2, and full-length EcPTP3. The negative-control (pBDwt/pADplasminC) and positive-control (pBDwt/pADwt) reactions are provided. This demonstrates that all three EcPTPs can interact with themselves and each other, although the domains responsible for this interaction remain to be determined.
When EcPTP1 is compared to other microsporidian PTP1s, including those of Encephalitozoon hellem and Encephalitozoon intestinalis, the areas of highest similarity are seen in the N-terminal and C-terminal regions (31). These N- and C-terminal regions contain multiple cysteines which are probably involved in the ability of EcPTP1 to form the polar tube, as evidenced by the ability of reducing agents, such as DTT, to solubilize this structure. The central region of the proteins, which has a repetitive motif, is very different among these and the few other microsporidia in which this gene has been cloned. We therefore sought to determine if the observed interactions of EcPTP1 with itself occurs at the N- or C-terminal region of this protein. Figure 5 demonstrates that like the full-length EcPTP1, the truncated N- and C-terminal regions of EcPTP1 were able to interact, in vivo, with each other in all possible combinations.
Yeast two-hybrid analysis of the interaction of EcPTP1 N-terminal and C-terminal domains. This illustrates the interactions of the pAD and pBD (bait and prey) constructs containing full-length EcPTP1 (EcPTP1-FL), N-terminal Ec-PTP1 (EcPTP1-NT), and C-terminal EcPTP1 (EcPTP1-CT). The negative-control (pBDwt/pADplasminC) and positive-control (pBDwt/pADwt) reactions are provided. This demonstrates that both the N- and C-terminal regions of EcPTP1 can interact with each other and themselves.
The central region of EcPTP1, amino acids 174 to 289, contains a region with a repeated amino acid motif. Although a repetitive motif is present in E. cuniculi, E. intestinalis, and E. hellem, it is different in each of these closely related organisms. We have hypothesized that this region may be involved in antigenic masking of the polar tube and would not be involved in protein-protein interactions in this structure (30, 31). Therefore, a construct expressing the EcPTP1 central gene sequence was produced, and this was studied for its ability to interact with the full-length N-terminal and C-terminal regions of EcPTP1. As demonstrated in Fig. 6, the protein encoded by the EcPTP1 central gene region did not interact with any of the other constructs used in this experiment (i.e., it did not interact with EcPTP1-FL, the N- or C-terminal region of EcPTP1, EcPTP2-FL, or EcPTP3-FL). These interactions were confirmed by switching the prey and bait vectors. In addition, the central region of EcPTP1 did not react with itself (see Fig. S1 in the supplemental material).
Yeast two-hybrid analysis of the interactions of the EcPTP1 N-terminal, C-terminal, and central-repeat domains of EcPTP2 and EcPTP3. (A) Interactions between EcPTP1-FL as the bait and EcPTP1-FL (1), EcPTP1-NT (2), the central region of EcPTP1 (EcPTP1-Cent) (3), or EcPTP1-CT (4) as the prey. (B) Interactions between EcPTP2-FL as the bait and EcPTP1-FL (1), EcPTP1-NT (2), EcPTP1-Cent (3), or EcPTP1-CT (4) as the prey. (C) Interactions between EcPTP3-FL as the bait and EcPTP1-FL (1), EcPTP1-NT (2), EcPTP1-Cent (3), or EcPTP1-CT (4) as the prey. A positive control (pBDwt/pADwt) (P) and a negative control (pBDwt/pADplasminC) (N) are shown in each group. This demonstrates that the central region of EcPTP1 does not contain any interacting domains. In addition, while EcPTP1-FL can interact with either EcPTP3-FL or EcPTP2-FL, neither the N-terminal nor the C-terminal domains are sufficient for this interaction to occur.
While both N-terminal and C-terminal constructs of EcPTP1 were able to interact with each other and with full-length EcPTP1, we sought to determine if each of these constructs was able to interact with full-length EcPTP2 or EcPTP3 as we had already demonstrated for full-length EcPTP1 (Fig. 4). As shown in Fig. 6, neither the N-terminal nor the C-terminal EcPTP1 construct interacted with EcPTP2 or EcPTP3.
DISCUSSION
When it is within the spore, the polar filament (tube) contains electron-dense material, but after germination, it forms a hollow tube through which the sporoplasm and nucleus travel to infect a host cell (12, 26). It is not known if the formation of this tube is due to polymerization of PTPs during germination at the growing tip of the polar tube or due to conformational changes in PTPs as the polar tube unfolds at its growing tip. Understanding the formation of the polar tube apparatus and the function of its components is essential for our understanding of spore germination and cell invasion in the Microsporidia.
The major polar tube protein gene (ptp1) of E. cuniculi, E. hellem, and E. intestinalis has been cloned and the corresponding protein (PTP1) expressed in vitro (5, 6, 15). Clones have also been obtained for the ptp1 genes of several different isolates of E. hellem, Glugea americanus, and Anncaliia (Brachiola) algerae (11, 19, 27, 29; L. M. Weiss, unpublished data). E. hellem ptp1 is a 1,362-bp gene encoding a 453-amino-acid protein with a predicted molecular mass of 43 kDa, E. cuniculi ptp1 is a 1,188-bp gene encoding a 395-amino-acid protein with a predicted molecular mass of 37 kDa (6, 15); however, these proteins have posttranslational modifications which increase their apparent molecular masses on electrophoresis. These two microsporidia are in the same genus and cannot be distinguished ultrastructurally, their polar tubes have functional identity, and their native PTP1s have similarities in overall amino acid composition, hydrophobicity, mass, and immunologic epitopes (15); despite this, their translated PTP1s have only limited identity in their amino acid sequences. Further comparison does, however, reveal similarities. Both translated proteins have a high number of proline and glycine residues, a similar percentage of cysteine, and a lack of arginine, tryptophan, and phenylalanine. The spatial distribution of both the cysteine and proline residues is conserved in both proteins. This suggests that conservation of function of these proteins may be provided by conservation of secondary structural motifs (15, 31). The N and C termini of these proteins display conservation, suggesting that these areas may have important structural or functional domains. In the Encephalitozoonidae PTP1s, the C terminus is high in cysteine residues and the last amino acid is a cysteine, which may be important for interactions between proteins. It has been hypothesized that the interactions of PTP1 with itself are sufficient for formation of the polar tube during germination of the spore. The data presented in the current paper demonstrate that EcPTP1 is capable of interacting with itself and that both the N-terminal and C-terminal regions of EcPTP1 have domains capable of interacting with full-length and truncated versions of EcPTP1.
While PTP1 is the major component of the polar tube, several other putative PTPs have been identified. For example, PTPs of 23, 27, and 34 kDa have been identified in G. americanus using monoclonal antibodies (MAbs) produced in response to the DTT-solubilized polar tube (13), and by two-dimensional (2-D) electrophoresis, several proteins can be seen in DTT-solubilized E. hellem polar tube preparations (27). Polyclonal and monoclonal antibodies that localized to the polar tube as determined by IFA and immunoelectron microscopy have identified putative PTPs of 34, 75, and 170 kDa in Glugea atherinae; 35, 52/55, and 150 kDa in E. cuniculi; 60 and 120 kDa in E. intestinalis; and 46, 34, 21, and 15 kDa in Nosema grylli (1, 4, 8). Of these, the ptp2 gene (5), encoding a 35-kDa E. cuniculi protein seen on SDS-PAGE, and the ptp3 gene (20), encoding an ∼150-kDa protein seen on SDS-PAGE, have been cloned. The N-terminal sequence of EcPTP2 has a characteristic signal peptide (for Golgi body-endoplasmic reticulum [ER] processing similar to that of EcPTP1), the central region contains a lysine-rich octapeptide motif (KPKKKKSK), and the C-terminal region of 27 residues is devoid of any basic residues and possesses 4 aspartate and 5 glutamate residues, forming an acidic tail. EcPTP2 has one putative N-glycosylation site and one RGD motif (possibly involved in a protein-protein interaction). EcPTP3 is synthesized as a 1,256-amino-acid precursor with a cleavable signal peptide and is encoded by a single transcription unit (3,990 bp) located on chromosome XI of E. cuniculi (20). Unlike EcPTP1 and EcPTP2, EcPTP3 can be solubilized in the presence of SDS alone without the need for a reducing agent such as DTT (20). It has been hypothesized that PTP3 may act as scaffolding protein for polar tube formation during development.
In this paper, we examined in detail the interactions of EcPTP1, EcPTP2, and EcPTP3 using yeast two-hybrid analysis to verify if these polar tube proteins interact with each other and to further define the complex of proteins present in the polar tube. As PTP1 is the major protein present in the polar tube of the Microsporidia, we focused on studying possible interactions between this major protein (EcPTP1) and itself, EcPTP2, and EcPTP3. Full-length EcPTP1, EcPTP2, and EcPTP3 were analyzed in all possible pair-wise combinations, as bait or prey. Results indicated that full-length EcPTP1 interacts, in vivo, with other EcPTPs and with itself. In addition, we demonstrated that in mature spores, EcPTP1, EcPTP2, and EcPTP3 interact with each other, as demonstrated by coimmunoprecipitation. DTSSP, a chemical cross-linker creating disulfide linkage between proteins, was used to facilitate cross-linking. Data from SDS-PAGE and immunoblotting (not shown) demonstrated that DTSSP caused the formation of large protein aggregates in unreduced samples (which barely entered the gel). Once such cross-linked samples were reduced with 25% 2-mercaptoethanol, immunoblot analysis identified separate bands reacting with antiserum to rEcPTP1, rEcPTP2, and rEcPTP3. This indicated the presence of all EcPTPs when the protein samples were pulled down using antibody to EcPTP1. In addition, immunofluorescence techniques verified that EcPTP1, EcPTP2, and EcPTP3 are located at similar positions on extruded polar tubes.
The N terminus, C terminus, and central region of PTP1 were tested in order to determine if they might interact with full-length PTP1 and with each other. The N and C termini of PTP1 appear to be more conserved among the various microsporidia examined than the central repeat region of this protein. It has been hypothesized that this indicates that the N and C termini may, therefore, contain interacting domains. Yeast two-hybrid analyses confirmed that both the N and C termini contained domains that interacted with full-length and the N- and C-terminal constructs of PTP1; however, neither the N- nor C-terminal constructs were sufficient to allow PTP1 to interact with either PTP2 or PTP3. Full-length PTP1 was able to interact with both PTP2 and PTP3. This suggests that the interaction of the full-length EcPTP1 with these other polar tube proteins may require a motif found in both the N and C termini of EcPTP1 or that these interactions depend on a conformational epitope seen only when the full-length EcPTP1 is expressed.
All of the cloned microsporidian PTP1s have central amino acid repeat regions that are predominantly hydrophilic. However, the repeats are different in composition and number among the Microsporidia. It is possible that this region is not important for the assembly of the polar tube and may function as an immunologic mask. Analysis of ptp1 from several isolates of E. hellem supports this view, as the number of repeats in their ptp1 central regions is variable (11, 19, 27, 29). In the process of evolution, a similar duplication of internal sequences has been noted in malarial and other protozoan genes, and this mechanism may be operative in the microsporidian ptp1 gene (21). Consistent with this hypothesis, we could not demonstrate any interactions of the central region of EcPTP1 with EcPTP2, EcPTP3, or with the N- or C-terminal constructs of EcPTP1.
This study presents the first detailed examination of the interaction of the three identified polar tube proteins (PTP1, PTP2, and PTP3) from a member of the Microsporidia. It provides the necessary data for more-detailed analysis of these interactions by mutagenesis or other studies. Determination of the structure of these proteins would also prove useful in understanding how these various polar tube proteins interact to produce the versatile invasion apparatus used by this widely disseminated parasitic protist group. As direct genetic manipulation of these organisms has not been developed, such biochemical approaches to the analysis of these protein interactions and the structure of the polar tube are crucial for improving our understanding of these important pathogens.
ACKNOWLEDGMENTS
This work was supported by National Institutes of Health grants AI31788 and 5R44GM064257 from the National Institute of Allergy and Infectious Diseases.
FOOTNOTES
- Received 23 October 2009.
- Returned for modification 7 December 2009.
- Accepted 9 March 2010.
- Copyright © 2010 American Society for Microbiology