Table 1.

Strains

Serovar/strainYr of isolationSourceReference and/or commentsGenBank accession no.
A/Sa-11957Conjunctiva20M58938
A/Har-131958Conjunctiva2J03813
B/TW-51959Conjunctiva38M17342
B/Jali-201985Conjunctiva21M33636
Ba/Apache-2a1960ConjunctivaThis studyAF063194
B/Alpha-951996?Urethra13U80075
B/IU-12261987UrineThis studyAF063208
C/TW31959Conjunctiva38M17343
D/B1201983–1991STDe35X62918
D/B1851983–1991STD35X62919
D/IU-8b1989UrethraThis study; identical to D/B120See X62918
D/IU-19b1989CervixThis study; identical to D/B120See X62918
D/IU-719601987UrethraThis studyAF063195
D/IU-724031987CervixThis studyAF063196
D/IU-837861988UrethraThis studyAF063197
D/IU-800211987CervixIdentical to D/IU-83786AF063197
D/IU-887121989CervixIdentical to D/IU-71960AF063195
D/IU-386381985CervixIdentical to D/IU-71960AF063195
D/IU-871781989CervixIdentical to D/IU-71960AF063195
D/IU-838361988CervixIdentical to D/IU-83786AF063197
D/IU-476741985CervixIdentical to D/IU-83786AF063197
D/IU-863901988UrethraIdentical to D/IU-83786AF063197
D/IC-Cal81991?STD35X62920
Da/TW-4481991?STD35X62921
Da/EV-2931983–1991STD(36)X77365
Da/IU-15541997UrineThis study; identical to D/IC-Cal8AF063209
E/UW5?CervixThis study; identical to E/Bour (32)See X52557
E/Bour 19901959Conjunctiva32X52557
E/Bour 19971959Conjunctiva12U78763
E/11989–1992STD12U78528
E/21989–1992STD12U78529
E/31989–1992STD12U78530
E/151989–1992STD12U78531
E/181989–1992STD12U78532
E/251989–1992STD12U78533
E/331989–1992STD12U78534
E/431989–1992STD12U78535
E/481989–1992STD12U78536
E/551989–1992STD12U78537
E/671989–1992STD12U78538
E/IU-15791997UrineThis study; identical to E/Bour (32)AF063211
E/IU-15861997UrineThis study; identical to E/Bour (32)AF063210
E/IU-51538c1986CervixThis studyAF063198
E/IU-71253c1987UrethraIdentical to E/IU-51538AF063198
E/IU-71254c1987CervixIdentical to E/IU-51538AF063198
F/IC-Cal31960?Conjunctiva47X52080
F/IU-15521997UrineThis studyAF063212
F/IU-16071997UrineThis study; identical to F/IC-Cal3AF063213
G/UW57a1971CervixThis studyAF063199
H/UW41965Cervix18X16007
I/UW12a1966UrethraThis studyAF063200
Ia/IU-4168a1987UrethraThis studyAF063201
Ia/IU-15881997UrineThis studyAF063205
J/UW36a1971CervixThis studyAF063202
J/IU-15531997UrineThis study; identical to J/UW36AF063206
Ja/IU-A7951986CervixThis studyAF063203
Ja/IU-A13001986CervixIdentical to Ja/IU-A795AF063203
Ja/IU-600631986UrethraIdentical to Ja/IU-A795AF063203
Ja/IU-711711987UrethraIdentical to Ja/IU-A795AF063203
Ja/IU-375381985CervixIdentical to Ja/IU-A795AF063203
Ja/IU-519601986CervixIdentical to Ja/IU-A795AF063203
Ja/IU-1157181992CervixIdentical to Ja/IU-A795AF063203
Ja/IU-142018d1994CervixIdentical to Ja/IU-A795AF063203
Ja/IU-142019d1994UrethraIdentical to Ja/IU-A795AF063203
K/UW311973?CervixThis studyAF056204
K/IU-16191997UrineThis study; identical to K/UW31AF063207
L1/4401968Bubo33M36533
L2/4341968Bubo37M14738
L3/4041967Bubo15X55700
MoPn/Nigg II1939Lung (mouse)15M64171
  • a Partial sequence for strain described is available in GenBank.

  • b These strains have identical sequences; they were taken from a sexual contact pair.

  • c Strains E/IU-51538 and E/IU-71254 are from the same patient at different time points, while E/IU-71253 is from the sexual contact of this patient at the second time point.

  • d These strains are from the same patient but different body sites.

  • e STD, sexually transmitted disease.