TABLE 3.

BLAST alignments of the derived amino acid sequences of the investigated S.pneumoniae ABC transporters

Locus tagaSize (no. of amino acids)ProteinOrganism% Identity/similaritybPossible substrate (transport classification)c
Sp0090319EfaeDRAFT_2526Enterococcus faecium61/80 (311)Sugar (CUT1 3.A.1.1)
Sp0091307EfaeDRAFT_2527Enterococcus faecium60/79 (300)Sugar (CUT1 3.A.1.1)
Sp0092491EfaeDRAFT_2538Enterococcus faecium53/70 (486)Sugar (CUT1 3.A.1.1)
Sp0148276SMU.1942cStreptococcus mutans55/76 (237)Methionine (MUT 3.A.1.24)
Sp0149284SPs1626Streptococcus pyogenes67/81 (278)Methionine (MUT 3.A.1.24)
Sp0150457SMU.1940cStreptococcus mutans70/85 (457)Methionine (MUT 3.A.1.24)
Sp0151353SsiuDRAFT_0064Streptococcus suis80/90 (352)Methionine (MUT 3.A.1.24)
Sp0152230SPs1624Streptococcus pyogenes71/89 (230)Methionine (MUT 3.A.1.24)
Sp0607219SMU.1522Streptococcus mutans74/85 (213)Amino acid (PAAT 3.A.1.3)
Sp0608219SMU.1521Streptococcus mutans62/81 (222)Amino acid (PAAT 3.A.1.3)
Sp0609254StheL01000593Streptococcus thermophilus60/73 (232)Amino acid (PAAT 3.A.1.3)
Sp0610252StheL01000592Streptococcus thermophilus82/90 (251)Amino acid (PAAT 3.A.1.3)
Sp0708215SsuiDRAFT_0032Streptococcus suis60/77 (209)Amino acid (PAAT 3.A.1.3)
Sp0709252SGO_0983Streptococcus gordonii88/94 (252)Amino acid (PAAT 3.A.1.3)
Sp0710225SGO_0984Streptococcus gordonii89/95 (225)Amino acid (PAAT 3.A.1.3)
Sp0711206SGO_0985Streptococcus gordonii87/94 (226)Amino acid (PAAT 3.A.1.3)
Sp0749386SAG1582Streptococcus agalactiae53/73 (390)BCAA (HAAT 3.A.1.4)
Sp0750289SAK_1597Streptococcus agalactiae83/93 (289)BCAA (HAAT 3.A.1.4)
Sp0751318gbs1630Streptococcus agalactiae73/88 (252)BCAA (HAAT 3.A.1.4)
Sp0752254SsuiDRAFT_0078Streptococcus suis85/93 (254)BCAA (HAAT 3.A.1.4)
Sp0753236SsuiDRAFT_0077Streptococcus suis87/96 (236)BCAA (HAAT 3.A.1.4)
Sp0846511Spy1227Streptococcus pyogenes81/91 (508)Ribonucleoside (CUT2 3.A.1.2)
Sp0847352SAK_1051Streptococcus agalactiae77/88 (353)Ribonucleoside (CUT2 3.A.1.2)
Sp0848318Spy0928Streptococcus pyogenes80/92 (318)Ribonucleoside (CUT2 3.A.1.2)
Sp1688277PM1760Pasteurella multocida80/91 (277)Sugar (CUT1 3.A.1.1)
Sp1689294PM1761Pasteurella multocida79/93 (291)Sugar (CUT1 3.A.1.1)
Sp1690445PM1762Pasteurella multocida70/85 (407)Sugar (CUT1 3.A.1.1)
Sp1796538SsuiDRAFT_0524Streptococcus suis78/89 (537)Sugar (CUT1 3.A.1.1)
Sp1797305SsuiDRAFT_0525Streptococcus suis82/94 (294)Sugar (CUT1 3.A.1.1)
Sp1798305SsuiDRAFT_0526Streptococcus suis84/95 (303)Sugar (CUT1 3.A.1.1)
Sp1824563Lxx14070Leifsonia xyli31/48 (539)Cation 2 (BIT 3.A.1.0)
Sp1825336STH2752Symbiobacterium thermophilum45/59 (343)Cation 2 (BIT 3.A.1.0)
Sp1826355Lxx14040Leifsonia xyli30/48 (323)Cation 2 (BIT 3.A.1.0)
Sp2084291RUMOBE_00498Ruminococcus obeum46/65 (287)Phosphate (PhoT 3.A.1.7)
Sp2085287Cthe_1604Clostridia thermocellum61/98 (284)Phosphate (PhoT 3.A.1.7)
Sp2086271DORLON_00312Dorea longicatena59/80 (287)Phosphate (PhoT 3.A.1.7)
Sp2087250BACCAP_00261Bacteroides capillosus72/86 (253)Phosphate (PhoT 3.A.1.7)
Sp2108423M_28Spy1048Streptococcus pyogenes53/67 (420)Maltodextrin (CUT1 3.A.1.1)
Sp2109435Spy1301Streptococcus pyogenes66/82 (430)Maltodextrin (CUT1 3.A.1.1)
Sp2110280SsuiDRAFT_0440Streptococcus suis85/93 (280)Maltodextrin (CUT1 3.A.1.1)
  • a That is, the TIGR4 genome locus tag number.

  • b The length, in amino acids, compared is indicated in parentheses.

  • c Transport classification and subfamily and number according to the transport classification system based on sequence similarity (32, 45; see also http://www.tcdb.org/).