TABLE 1.

Primers used in this study

PrimerSequence
rpoS-int15′-CCA AGC GAG GAT TCC GTT TTT C-3′
rpoS-int2a5′-AAA ACG TCT TGC GAT AAC CTG-3′
mip-int15′-AAA TCT CTA TCG CTA ACG CAC AAG-3′
mip-int2a5′-AAC TCA CTC ACC CCA CCA CGA C-3′
fliA-int15′-GGT GCC GCG TTC TGT TTA TC-3′
fliA-int2a5′-CGG TGC GTT GCT TGA CTT-3′
flaA-int15′-CCA ATT TTA CCG GGG CAC TA-3′
flaA-int2a5′-AAC GGC GCT GAT TGA TAA AG-3′
csrA-int1b5′-AGC TGC TAT GTT AGG GAG-3′
csrA-int2a,c5′-TAC TGC TTG TTC CGA ATC-3′
letETn15′-TAC ATG CAC TAA AAA GCG GTT CTG-3′
letETn2a5′-TGA TCA TGC TAC GAG CTC AAG TAA-3′
  • a Used for ssDNA probe synthesis.

  • b Derived from csrA uni139-BamHI (17).

  • c Derived from csrA rev340-HindIII (17).