TABLE 4.

Distribution of immunoreactive genes in ETEC genomes

AnnotationAccession no.Presence (+) or absence (-)a in isolate:% Presentb in:
E24377AB7ATW10598TW10722TW10828TW11861TW14425HSETEC genomesNon-ETEC genomes
FliCYP_00322979412.55.41
EatAAAO17297+++++750
Antigen 43YP_001464349++++62.535.1
EtpAAAX13509+++++750
CfaAAAC41414+250
FimD2ABV18716++++++++10051.4
CfaBP02971+250
LT-BAAB02982++37.50
CexEABM9227512.50
TibAQ9XD84+37.50
GroELAAR21890++++++++100100
DnaKNP_308041++++++++100100
DegP/HtrANP_285857++++++++100100
OmpANP_309068+++++++87.5100
NmpCAAB40749+++++++10062.2
FecAYP_405685++++++87.543.2
OmpXNP_752830++++++++100100
HypotheticalNP_288109++++++++10091.9
HypotheticalZP_04533914+250
HypotheticalNP_755083+++++7543.2
HypotheticalNP_311861+++++++87.5100
HypotheticalYP_853622++37.58.10
HypotheticalYP_002408614+255.41
HypotheticalNP_286070++++++++10075.7
LppNP_288111+++++++87.597.3
HYP9ZP_04533918+250
YghJYP_002388453++++++++10059.5
HypotheticalNP_288218++++++++100100
HypotheticalYP_541993+++++7543.2
FusANP_312218+++++++87.5100
H-NSCAA47740++++++++100100
aceEZP_03072175++++++++100100
tpxAAC43517++++++++100100
trxAAAA24696++++++++10097.3
lpdANP_285812++++++++10097.3
  • a +, Present with a BSR ≥ 0.80, which is similar to 80% peptide identity over 80% of the length of the peptide. −, Absent or demonstrating a BSR < 0.80.

  • b For the ETEC genomes, the peptides were identified in H10407 and the ETEC group includes H10407, E24377A, B7A, and the five new isolates in this study. The non-ETEC genome group contains the 42 non-ETEC genomes included in Fig. 1.