TABLE 3

Genes with increased expression in the ΔoxyR strain in LB

Category and locusAnnotation (KEGG)Fold change
Peroxide detoxification
    A1S_1458Alkyl hydroperoxide reductase subunit F (ahpF2)8.4
    A1S_1200Alkyl hydroperoxide reductase subunit F (ahpF1)8.3
    A1S_1201Alkyl hydroperoxide reductase subunit F (ahpF1)7.9
    A1S_1459Alkyl hydroperoxide reductase subunit F (ahpF2)7.4
    A1S_1460Alkyl hydroperoxide reductase subunit F (ahpF2)7.3
    A1S_1458Alkyl hydroperoxide reductase subunit F (ahpF2)8.4
Sulfur homeostasis
    A1S_2531Sulfate transport system substrate-binding protein4.6
    A1S_2533Putative esterase4.5
Iron homeostasis
    A1S_1647Putative siderophore biosynthesis protein4.4
Amino acid transport and metabolism
    A1S_1528Hypothetical24.0
    A1S_3046Oligopeptidase A5.2
    A1S_3047Oligopeptidase A5.1
Chaperones
    A1S_2959Molecular chaperone GrpE5.1
    A1S_2960Molecular chaperone DnaK4.6
    A1S_2665K04078 chaperonin GroES4.4
Metabolism (other)
    A1S_0804Trehalose 6-phosphate phosphatase4.6
Other
    A1S_0646Intracellular multiplication protein IcmB4.5
    A1S_0647Intracellular multiplication protein IcmO4.5
Hypothetical
    A1S_3873Hypothetical protein19.0
    A1S_3546Hypothetical protein4.9