TABLE 1

Fold change in transcript levels of the genes analyzed in Fig. 2 and 3

Gene nameFunctionNo. of Trp codonsFold change in transcript in IFN-γ-treated cells from 24 to 48 hpia
mreBCell division00.63 ± 0.26
rodZCell division55.91 ± 0.47
nusATranscription00.75 ± 0.19
nusGTranscription42.34 ± 0.47
dksATranscription00.70 ± 0.34
rhoTranscription01.11 ± 0.03
obgTranslation28.57 ± 3.29
ubiAMetabolism57.90 ± 1.90
groEL_1Chaperone00.16 ± 0.12
groEL_2Chaperone21.96 ± 0.29
groEL_3Chaperone11.74 ± 0.41
clpP_1Protein degradation31.65 ± 0.05
clpP_2Protein degradation00.35 ± 0.09
rsbV_1Transcription00.95 ± 0.22
rsbV_2Transcription01.23 ± 0.37
  • a P = 0.0001 and r = 0.8560 by Spearman rank correlation analysis for fold change versus Trp content.