Table 3.

Genetic elements in the pSP102 insert

ORFSize (bp)Predicted molecular mass of gene product (kDa)Similarity to:% Identity/  % similarityAnnotated gene name
011807.1 H. pyloriHpn100/100 hpn
0262423.7ORF02
032519.4 B. subtilis 9.7-kDa hyp. protein35/61ORF03
042,760b 106.1b C. crescentusIleS49b/66b ileS
E. coliIleS39b/56b
0591234.6 A. tumefaciensTrbB28/47 virB11
E. coliTraG28/46
A. tumefaciens VirB1121/39
H. pylori 26695 TIGR HP052529/53
061,30247.6 S. typhimuriumFlil44/60 flil
A. tumefaciens Flil40/56
Y. enterocolitica YscN43/62
X. campestris HrpB643/62
E. amylovoraHrcN41/62
072649.8 B. subtilisFliQ45/65 fliQ
E. coliFliQ51/73
S. typhimurium SpaQ30/47
Y. pseudotuberculosis YscS34/58
08a 780b 28.6b B. subtilisMurB31b/49b murB
  • a First 393 nt present on pSP102.

  • b Based on the complete gene sequences in the corresponding H. pylori 26695 region.