Table 1.

ORFs of pB171

ORFGenePosition (bp)aSize (aa)Homologue by BLASTIdentity/Similarity (%)Accession no.
ORF1repI290–1267325RepIU27184
ORF2rsvc1590–2126178RsvU27184
ORF3bfpA2714–3295193BfpAU27184
ORF4bfpG3342–3743133BfpGU27184
ORF5bfpB3750–5408552BfpBU27184
ORF6bfpC5405–6613402BfpCU27184
ORF7bfpU6615–7085156BfpUU27184
ORF8bfpD7095–8699534BfpDU27184
ORF9bfpE8706–9764352BfpEU27184
ORF10bfpF9748–10743331BfpFU27184
ORF11bfpP10750–11499249BfpPU27184
ORF12bfpH11481–11927148BfpHU27184
ORF13bfpI11948–12493182BfpIU27184
ORF14bfpJ12490–13041183BfpJU27184
ORF15bfpK13025–13519164BfpKU27184
ORF16bfpL13522–13971149BfpLU27184
ORF17bfpM14259–14588109BfpMU27184
ORF18c15260–1548173ORF1 of stability locus of R100 (NR1)78/89P11907
ORF1915526–1581094Putative resolvase of Y. pestis pMT144/71Q58416
ORF2016285–16878197Serine acetyltransferase39/57S71181
ORF21trcPc18216–18659147TrcA50/67AB010764
ORF22c19071–19937288Transposase of IS399/99U73857
ORF23c19934–2023399Hypothetical protein100/100U73857
ORF24bfpT20757–21581274BfpTL42638
ORF25bfpV21629–22018129BfpVL42638
ORF26bfpW22068–2233789BfpWL42638
ORF27c22914–23366150Transposase of IS285L42638
ORF2823900–24460186Orf5, transposase of IS10 (C half)36/61L42638
ORF2924865–25515216L001343/55AF071034
ORF3025515–25862116L001476/85AF071034
ORF3125882–27453527L001557/70AF071034
ORF3229084–29425113Transposase of IS9194/94 (truncated)S23782
ORF3329581–30087168Transposase of IS9192/93 (truncated)S23782
ORF3430507–31371288Transposase of IS399/99U73857
ORF3531771–33126451ToxB of EHEC96/97 (truncated)AB011549
ORF3633144–33650168ToxB of EHEC97/98 (truncated)AB011549
ORF3733740–3393464Transposase of IS363/66 (truncated)AF041810
ORF3833972–3419975Transposase of IS386/86 (truncated)AF041810
ORF39c34224–34637137IstB of IS2192/94 (truncated)P15026
ORF40c34650–35198182IstA of IS2197/97 (truncated)P15026
ORF4135255–36277340Transposase of IS10098/98U59875
ORF4236277–36618113Transposase of IS100100/100 (truncated)U59875
ORF43c36749–3703695Hypothetical RelE-like protein87/87Q60228
ORF44c37033–3728483ORF7 of IncF plasmid95/97M26308
ORF45repA1c38249–39106285Replication protein (RepA1)83/84M26937
ORF46copBc39420–3966882CopB98/98S13675
ORF47snrBc39952–4015868SnrB97/98P13970
ORF48c40866–4112987Hypothetical protein89/92Q99342
ORF4941400–42050216L001343/55AF071034
ORF5042050–42397115L001476/85AF071034
ORF5142417–43988523L001557/70AF071034
ORF52c44385–44804139Unnamed protein of E. coli76/83AB011549
ORF53klcAc44851–45276141Antirestriction protein KlcA85/87AB011549
ORF54piv45846–46673275Pilin gene inverting Protein (PivML)35/50P20665
ORF55c46912–48062383IS30transposase95/95U70214
ORF5648194–48619141Transposase of IS91197/99 (truncated)AE000133
ORF57c48486–48917143Hypothetical protein95/95U70214
ORF58c48832–49140102Hypothetical protein100/100 (truncated)U70214
ORF5949226–50734502Reverse transcriptase-like protein99/99D37918
ORF6050887–51303138ORFB of IS91188/94AF074613
ORF6151726–52211161Glutamate decarboxylase53/68 (truncated)D90903
ORF6252462–53922486Amino acid antiporter28/48AE001295
ORF6353944–54765273Glutamate racemase33/53P52972
ORF64c54884–55279131InsB protein of IS193/96P03832
ORF65c55306–5557890InsA protein of IS193/95P03829
ORF66impB56128–56814228ImpB of S. flexneri97/97AF079316
ORF67stbBc57097–57489130StbB protein of R100 (NR1)26/48P11906
ORFGenePosition (bp)aSize (aa)Homologue by BLASTIdentity/Similarity (%)Accession no.
ORF68stbAc57494–58465323StbA protein of R100 (NR1)43/65P11904
ORF6958694–59338214ParA protein of H. pylori27/53AE000608
ORF7059332–5960791
ORF71rsvBc59745–60554269Resolvase of F plasmid64/65P06615
ORF72ccdBc60555–60881108CcdB99/99P05703
ORF73ccdAc60862–6108072CcdA97/97P05702
ORF7461793–64414873
ORF7564613–6484376VagC of S. dublinvirulence plasmid90/93S22685
ORF7664855–65190111VagD of S. dublinvirulence plasmid88/92 (truncated)S22686
ORF7765488–66510340Transposase of IS10099/99U59875
ORF7866507–67285260Transposase of IS100100/100U59875
ORF79c67389–67919176hypothetical protein ofRhizobium plasmid29/50Z95210
ORF80c67922–6821095hypothetical protein ofRhizobium plasmid32/43P55365
  • a A position begin with “c” represents an ORF in the minus strand.