Table 4.

Housekeeping alleles shared by GAS and GCS-GGSa

LocusShared GCS-GGS alleleGCS-GGS emm types representedGroup carbohydrate representedNo. of GCS-GGS isolates representedGCS-GGS allelic frequencyShared GAS alleleGAS emm types representedNo. of GAS isolates representedGAS allelic frequency
gtr101stG4974, stG480G20.0588031, 87, st4935180.0849
102stC839, stG4831C, G20.0588063, 28, 49, 53, 60, 76, 77, 91, st4973, st64/14, stD633, stNS5400.1887
103stG480G10.0294139310.0047
104stC839, stG11C, G30.0882265710.0047
murI101stG480G10.0294041220.1038
102stG480G10.0294083, 4, 8, 19, 24, 26, 29, 34, 52, 66, 78, 89, 93, st1RP31, st2370.1, st4973, st64/14550.2594
103stG4831G10.0294247010.0047
104stG643G10.02940212, 14, 39, 49, 51, 55, 63, 77, 81, 83, 90, 91, st3365, st4529, st4935, st833, stD432, stD633300.1415
mutS101stG643G10.0294079, 11, 25, 42, 49, 57, 60, 81, 89, stD432140.0660
recP105stG10G10.0294022, 3, 33, 43, 53, 83, 90, 91, 92, 93, st2370.1, st4935, st4973, stNS5460.2170
106stG4974G10.0294041, 70,st4529220.1038
xpt103stG643C10.0294021, 4, 12, 33, 42, 52, 53, 60, 76, 87, 91, 92,stNS5550.2594
yqiL101stG4974G10.02941251,st2370.1, st336530.0142
102stG480G10.0294041, 2, 4, 8, 11, 22, 25, 49, 50, 62, 68, 73, 76, 44/61, 90,st833430.2029
103stG480G10.02941588, 9230.0142
105stC839C10.0294011, 4, 9, 11, 13, 32, 39, 49, 66, 67, 78, 44/61, 82, 89, st2346, st4592, st4935, st64/14480.2264
  • a Analysis includes 34 isolates of GCS and GGS (S. dysgalactiae subsp. equisimilis) and 212 isolates of GAS. Minimum possible allelic frequencies are 0.0294 and 0.0047 for GCS-GGS and GAS, respectively.