Table 1.

Prevalence of lifA sequences in strains ofE. coli and related organisms

SpeciesStrainPathotypeaSerotype or serogroupAttaching and effacing activitylifA probe resultsReference or sourceb
E. coli 13EPECO111++ 30,31, 39
E. coli 41EPECO111++ 30, 31, 39
E. coli 45EPECO111++ 30, 31,39
E. coli 68EPECO111++ 30, 31, 39
E. coli 71EPECO111++ 30, 31,39
E. coli 009-271082EPECO111++ 30, 31,49
E. coli 031-051082EPECO111++ 30, 31, 49
E. coli 031-161182EPECO111++ 30, 31,49
E. coli 045-291182EPECO111++ 30, 31,49
E. coli 081-080883EPECO111++ 30, 31,49
E. coli 2309-77EPECO111ab:H2++ 30,31
E. coli 2430-78EPECO111ab:NM++ 5, 16, 30,31
E. coli 2198-77EPECO111ab:NM++ 15,16
E. coli 10EPECO119+ 30, 31, 39
E. coli 22EPECO119+ 30, 31,39
E. coli 27EPECO119+ 30, 31, 39
E. coli 51EPECO119+ 30, 31,39
E. coli 61EPECO119+ 30, 31, 39
E. coli 77EPECO119+ 30, 31,39
E. coli 070-210183EPECO119+ 30, 31,49
E. coli 105-140583EPECO119+ 30, 31,49
E. coli 34EPECO119+ 30, 31, 39
E. coli 0659-79EPECO119:H6+ 5, 16,30
E. coli 2450-80EPECO119:H6+ 5, 30,31
E. coli 2395-80EPECO119:H6+ 5, 30, 31
E. coli 023-220982EPECO126++ 30, 31,49
E. coli 029-261082EPECO126++ 30, 31,49
E. coli 086-240583EPECO127+ 30, 31,49
E. coli E2348/69EPECO127:H6++ 17, 19, 37,38
E. coli 050-250783EPECO142++ 30, 31,49
E. coli 012-050982EPECO142+ 30, 31,49
E. coli 042-060983EPECO142++ 30, 31,49
E. coli 851/71EPECO142:H6++ 37,62
E. coli 6EPECO55++ 30,31, 39
E. coli 9EPECO55++ 30, 31, 39
E. coli 11EPECO55+ 30, 31,39
E. coli 30EPECO55++ 30,31, 39
E. coli 37EPECO55++ 30, 31, 39
E. coli 55EPECO55++ 30, 31,39
E. coli 59EPECO55++ 30,31, 39
E. coli 73EPECO55++ 30, 31, 39
E. coli 2087-77EPECO55:H6++ 5, 16,30, 31
E. coli 0660-79EPECO55:H7++ 5, 16,30
E. coli 0036-78EPECO55:H7++ 5
E. coli 2362-75EPECO55:NM++ 5, 30,31
E. coli 38EPECO86+ 30, 31, 39
E. coli 43EPEC++ 30, 31,39
E. coli EDL931EHECO157:H7+ 16,64
E. coli 86-81EHECO157:H7+ 16
E. coli 86-24EHECO157:H7+ 27
E. coli 85-989EHECO157:H7+CVD
E. coli 85-855EHECO157:H7+CVD
E. coli E3787EHECO26:H11++B. Rowe
E. coli 85-707EHECO26:H11++CVD
E. coli 85-0839EHECO111:NM++CVD
E. coli RDEC-1REPECO15:NM++ 10, 11, 30,70
E. coli JM221EAECO78:H33/35 42, 65,66
E. coli 17-2EAECO?:H2 50, 57,66
E. coli 042EAECO44:H18 66
E. coli 73-1EAECCVD
E. coli E12860/0EIECO124:H− 59
E. coli E20850/0EIECO143:H− 59
E. coli E50851/1EIECO164:H− 59
E. coli E5273/0EIECO28ac:H− 16,59
E. coli E1181AETECO25:H42CVD
E. coli CFID499-2ETECO6CVD
E. coli M408C1ETECO6:H16CVD
E. coli H10407 ETECO78:H11 16,61
E. coli E44324 UPECO15:H1 53
E. coli CFT073UPEC 46
E. coli CFT325UPEC 46
E. coli CFT132UPEC 46
E. coli HSNF 21, 37
E. coli FN414NF 46
E. coli EFC4NF 46
E. coli EFC1NF 46
E. coli EFC2NF 46
Citrobacter freundii 29219ATCC
C. rodentium 4280++ 58
Hafnia alvei 13337ATCC
H. alvei 10457+ 3
H. alvei 10790+ 3
H. alvei 19982+ 2
Salmonella enterica serovarenteritidis 10697CVD
Salmonella serovarenteritidis 3319CVD
Salmonellaenterica serovartyphi Ty2 13,23
Salmonella enterica serovartyphimurium 14028 44, 45,54
Yersinia enterocolitica 937 48
Yersinia pseudotuberculosis 527-2J. Glenn Morris
  • a Pathotype refers to the following categories of pathogenic E. coli: REPEC, rabbit enteropathogenic E. coli; EAEC, enteroaggregative E. coli; EIEC, enteroinvasive E. coli; ETEC, enterotoxigenic E. coli; UPEC, uropathogenic E. coli; and NF, normal flora E. coli from the feces of healthy volunteers.

  • b CVD, Center for Vaccine Development; ATCC, American Type Culture Collection.